Protein–RNA interactions for Protein: Q9D0R4

Ddx56, Probable ATP-dependent RNA helicase DDX56, mousemouse

Known RBP Predictions only

Length 546 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ddx56Q9D0R4 Gm37641-201ENSMUST00000193837 239 ntBASIC5.02□□□□□ -1.61
Ddx56Q9D0R4 Gm44402-201ENSMUST00000203677 238 ntBASIC5.02□□□□□ -1.61
Ddx56Q9D0R4 Gm35216-201ENSMUST00000203777 433 ntTSL 2 BASIC5.02□□□□□ -1.61
Ddx56Q9D0R4 Olfr1088-ps1-201ENSMUST00000213686 863 ntBASIC5.02□□□□□ -1.61
Ddx56Q9D0R4 AL935138.1-201ENSMUST00000215309 196 ntBASIC5.02□□□□□ -1.61
Ddx56Q9D0R4 AC158641.1-201ENSMUST00000218933 229 ntBASIC5.02□□□□□ -1.61
Ddx56Q9D0R4 1700042O05Rik-201ENSMUST00000219017 584 ntTSL 1 (best) BASIC5.02□□□□□ -1.61
Ddx56Q9D0R4 AC139754.1-201ENSMUST00000219418 950 ntTSL 1 (best) BASIC5.02□□□□□ -1.61
Ddx56Q9D0R4 AC192334.2-201ENSMUST00000223087 1091 ntBASIC5.02□□□□□ -1.61
Ddx56Q9D0R4 AC154808.1-201ENSMUST00000223156 730 ntTSL 5 BASIC5.02□□□□□ -1.61
Ddx56Q9D0R4 Pik3c2g-201ENSMUST00000032353 1206 ntTSL 5 BASIC5.02□□□□□ -1.61
Ddx56Q9D0R4 Vmn1r79-201ENSMUST00000062811 921 ntAPPRIS P1 BASIC5.02□□□□□ -1.61
Ddx56Q9D0R4 Sult2a6-201ENSMUST00000076576 961 ntAPPRIS P1 TSL 1 (best) BASIC5.02□□□□□ -1.61
Ddx56Q9D0R4 Gm10038-201ENSMUST00000077233 441 ntBASIC5.02□□□□□ -1.61
Ddx56Q9D0R4 H2al1o-201ENSMUST00000079952 509 ntAPPRIS P1 BASIC5.02□□□□□ -1.61
Ddx56Q9D0R4 Gm6177-201ENSMUST00000085589 465 ntBASIC5.02□□□□□ -1.61
Ddx56Q9D0R4 Gm6361-201ENSMUST00000091031 435 ntBASIC5.02□□□□□ -1.61
Ddx56Q9D0R4 Ube2v2-201ENSMUST00000096234 609 ntTSL 3 BASIC5.02□□□□□ -1.61
Ddx56Q9D0R4 Gm15773-201ENSMUST00000118665 1448 ntBASIC5.02□□□□□ -1.61
Ddx56Q9D0R4 Gm15095-201ENSMUST00000118996 1430 ntBASIC5.02□□□□□ -1.61
Ddx56Q9D0R4 Gm44625-201ENSMUST00000207838 1561 ntBASIC5.02□□□□□ -1.61
Ddx56Q9D0R4 Olfr875-202ENSMUST00000215128 2039 ntAPPRIS P1 TSL 5 BASIC5.02□□□□□ -1.61
Ddx56Q9D0R4 Gm43011-201ENSMUST00000197897 4433 ntBASIC5.02□□□□□ -1.61
Ddx56Q9D0R4 Usp46-201ENSMUST00000068058 4557 ntAPPRIS P1 TSL 1 (best) BASIC5.02□□□□□ -1.61
Ddx56Q9D0R4 Gm37887-201ENSMUST00000192752 2716 ntBASIC5.02□□□□□ -1.61
Ddx56Q9D0R4 Fsd1l-207ENSMUST00000180164 7340 ntAPPRIS ALT1 TSL 5 BASIC5.01□□□□□ -1.61
Ddx56Q9D0R4 Kcnt2-203ENSMUST00000120796 3540 ntAPPRIS P1 TSL 5 BASIC5.01□□□□□ -1.61
Ddx56Q9D0R4 Gm38235-201ENSMUST00000194600 4952 ntBASIC5.01□□□□□ -1.61
Ddx56Q9D0R4 Gm43648-201ENSMUST00000197775 2485 ntBASIC5.01□□□□□ -1.61
Ddx56Q9D0R4 Gm30524-201ENSMUST00000204271 2300 ntTSL 1 (best) BASIC5.01□□□□□ -1.61
Ddx56Q9D0R4 B230206I08Rik-201ENSMUST00000207479 3191 ntBASIC5.01□□□□□ -1.61
Ddx56Q9D0R4 AC154511.1-201ENSMUST00000222578 1587 ntBASIC5.01□□□□□ -1.61
Ddx56Q9D0R4 Mir599-201ENSMUST00000102378 88 ntBASIC5.01□□□□□ -1.61
Ddx56Q9D0R4 Rpl38-ps2-201ENSMUST00000117356 213 ntBASIC5.01□□□□□ -1.61
Ddx56Q9D0R4 Gm15670-201ENSMUST00000117740 447 ntBASIC5.01□□□□□ -1.61
Ddx56Q9D0R4 Gm13454-201ENSMUST00000118166 483 ntBASIC5.01□□□□□ -1.61
Ddx56Q9D0R4 Gm8129-201ENSMUST00000118230 213 ntBASIC5.01□□□□□ -1.61
Ddx56Q9D0R4 Olfr1149-ps1-201ENSMUST00000118232 691 ntBASIC5.01□□□□□ -1.61
Ddx56Q9D0R4 Hmgb1-ps6-201ENSMUST00000119503 616 ntBASIC5.01□□□□□ -1.61
Ddx56Q9D0R4 Ifna-ps1-201ENSMUST00000119856 555 ntBASIC5.01□□□□□ -1.61
Ddx56Q9D0R4 Gm14008-201ENSMUST00000120483 274 ntBASIC5.01□□□□□ -1.61
Ddx56Q9D0R4 Gm26045-201ENSMUST00000157862 97 ntBASIC5.01□□□□□ -1.61
Ddx56Q9D0R4 Gm22733-201ENSMUST00000158094 91 ntBASIC5.01□□□□□ -1.61
Ddx56Q9D0R4 Gm23046-201ENSMUST00000158369 284 ntBASIC5.01□□□□□ -1.61
Ddx56Q9D0R4 Gm16566-201ENSMUST00000160387 910 ntBASIC5.01□□□□□ -1.61
Ddx56Q9D0R4 D830030K20Rik-202ENSMUST00000178670 441 ntTSL 1 (best) BASIC5.01□□□□□ -1.61
Ddx56Q9D0R4 Gm24897-201ENSMUST00000179033 107 ntBASIC5.01□□□□□ -1.61
Ddx56Q9D0R4 Mir7j-201ENSMUST00000184427 122 ntBASIC5.01□□□□□ -1.61
Ddx56Q9D0R4 Gm45048-201ENSMUST00000207058 429 ntBASIC5.01□□□□□ -1.61
Ddx56Q9D0R4 Sult2a7-203ENSMUST00000210034 870 ntTSL 5 BASIC5.01□□□□□ -1.61
Ddx56Q9D0R4 Rpl26-ps1-201ENSMUST00000213139 426 ntBASIC5.01□□□□□ -1.61
Ddx56Q9D0R4 AC161256.1-201ENSMUST00000217312 213 ntBASIC5.01□□□□□ -1.61
Ddx56Q9D0R4 1700030L22Rik-202ENSMUST00000222223 704 ntTSL 1 (best) BASIC5.01□□□□□ -1.61
Ddx56Q9D0R4 AC133176.1-201ENSMUST00000226668 219 ntBASIC5.01□□□□□ -1.61
Ddx56Q9D0R4 Ear-ps9-202ENSMUST00000226796 245 ntBASIC5.01□□□□□ -1.61
Ddx56Q9D0R4 AC154738.5-201ENSMUST00000227397 310 ntBASIC5.01□□□□□ -1.61
Ddx56Q9D0R4 AC154532.2-201ENSMUST00000228947 598 ntBASIC5.01□□□□□ -1.61
Ddx56Q9D0R4 Defb8-201ENSMUST00000033854 287 ntAPPRIS P1 TSL 1 (best) BASIC5.01□□□□□ -1.61
Ddx56Q9D0R4 Olfr736-201ENSMUST00000058965 939 ntAPPRIS P1 BASIC5.01□□□□□ -1.61
Ddx56Q9D0R4 Olfr782-201ENSMUST00000077024 945 ntAPPRIS P1 BASIC5.01□□□□□ -1.61
Ddx56Q9D0R4 Snord15b-201ENSMUST00000083032 145 ntBASIC5.01□□□□□ -1.61
Ddx56Q9D0R4 AC133076.2-201ENSMUST00000227678 3532 ntBASIC5.01□□□□□ -1.61
Ddx56Q9D0R4 Gm42494-201ENSMUST00000196515 3051 ntBASIC5.01□□□□□ -1.61
Ddx56Q9D0R4 Nexn-212ENSMUST00000199470 2392 ntAPPRIS ALT2 TSL 5 BASIC5.01□□□□□ -1.61
Ddx56Q9D0R4 Olfr920-201ENSMUST00000074740 5711 ntAPPRIS P1 TSL 1 (best) BASIC5.01□□□□□ -1.61
Ddx56Q9D0R4 Klhl28-203ENSMUST00000222508 6459 ntAPPRIS P1 TSL 1 (best) BASIC5.01□□□□□ -1.61
Ddx56Q9D0R4 Dbpht2-202ENSMUST00000221311 5341 ntBASIC5.01□□□□□ -1.61
Ddx56Q9D0R4 Gm26760-201ENSMUST00000181901 1604 ntTSL 1 (best) BASIC5.01□□□□□ -1.61
Ddx56Q9D0R4 Gm10811-201ENSMUST00000221985 2448 ntBASIC5.01□□□□□ -1.61
Ddx56Q9D0R4 Sema3a-201ENSMUST00000030714 5930 ntAPPRIS P1 TSL 1 (best) BASIC5.01□□□□□ -1.61
Ddx56Q9D0R4 Arpp19-203ENSMUST00000166549 1747 ntTSL 1 (best) BASIC5□□□□□ -1.61
Ddx56Q9D0R4 Rnf213-202ENSMUST00000131035 16716 ntAPPRIS P5 TSL 5 BASIC5□□□□□ -1.61
Ddx56Q9D0R4 Fnbp1l-203ENSMUST00000162947 1830 ntAPPRIS P1 TSL 5 BASIC5□□□□□ -1.61
Ddx56Q9D0R4 Msr1-202ENSMUST00000170091 3636 ntTSL 1 (best) BASIC5□□□□□ -1.61
Ddx56Q9D0R4 Olfr364-ps1-202ENSMUST00000214905 1914 ntAPPRIS P1 TSL 5 BASIC5□□□□□ -1.61
Ddx56Q9D0R4 Gm614-201ENSMUST00000101358 748 ntAPPRIS P1 TSL 1 (best) BASIC5□□□□□ -1.61
Ddx56Q9D0R4 Gm24273-201ENSMUST00000102332 164 ntBASIC5□□□□□ -1.61
Ddx56Q9D0R4 Gm14880-201ENSMUST00000117581 292 ntBASIC5□□□□□ -1.61
Ddx56Q9D0R4 Klrc2-203ENSMUST00000118401 707 ntAPPRIS ALT2 TSL 1 (best) BASIC5□□□□□ -1.61
Ddx56Q9D0R4 Klrc2-204ENSMUST00000119533 717 ntAPPRIS P4 TSL 1 (best) BASIC5□□□□□ -1.61
Ddx56Q9D0R4 2610024D14Rik-201ENSMUST00000121233 294 ntBASIC5□□□□□ -1.61
Ddx56Q9D0R4 Gm25103-201ENSMUST00000122671 318 ntBASIC5□□□□□ -1.61
Ddx56Q9D0R4 Gm16189-201ENSMUST00000123707 997 ntTSL 1 (best) BASIC5□□□□□ -1.61
Ddx56Q9D0R4 Gm23352-201ENSMUST00000158428 64 ntBASIC5□□□□□ -1.61
Ddx56Q9D0R4 Gm23473-201ENSMUST00000158883 116 ntBASIC5□□□□□ -1.61
Ddx56Q9D0R4 Dnaja1-ps-201ENSMUST00000162103 642 ntBASIC5□□□□□ -1.61
Ddx56Q9D0R4 Gm17472-201ENSMUST00000167638 352 ntAPPRIS P1 TSL 5 BASIC5□□□□□ -1.61
Ddx56Q9D0R4 Gm24925-201ENSMUST00000178157 107 ntBASIC5□□□□□ -1.61
Ddx56Q9D0R4 RMST_1.1-201ENSMUST00000182623 407 ntTSL 2 BASIC5□□□□□ -1.61
Ddx56Q9D0R4 Gm29596-201ENSMUST00000185710 385 ntBASIC5□□□□□ -1.61
Ddx56Q9D0R4 Gm32916-203ENSMUST00000208033 789 ntTSL 5 BASIC5□□□□□ -1.61
Ddx56Q9D0R4 Gm45379-201ENSMUST00000211772 549 ntBASIC5□□□□□ -1.61
Ddx56Q9D0R4 Gm18225-201ENSMUST00000216708 742 ntBASIC5□□□□□ -1.61
Ddx56Q9D0R4 AC125399.1-201ENSMUST00000224236 595 ntBASIC5□□□□□ -1.61
Ddx56Q9D0R4 Gm6776-201ENSMUST00000057752 900 ntBASIC5□□□□□ -1.61
Ddx56Q9D0R4 Gm23300-201ENSMUST00000082712 125 ntBASIC5□□□□□ -1.61
Ddx56Q9D0R4 Gm26128-201ENSMUST00000083170 110 ntBASIC5□□□□□ -1.61
Ddx56Q9D0R4 Rps15a-ps2-201ENSMUST00000087473 393 ntBASIC5□□□□□ -1.61
Ddx56Q9D0R4 Gm11808-201ENSMUST00000089430 504 ntAPPRIS P1 BASIC5□□□□□ -1.61
Ddx56Q9D0R4 Defb41-202ENSMUST00000097817 198 ntAPPRIS P1 TSL 1 (best) BASIC5□□□□□ -1.61
Retrieved 100 of 76,532 protein–RNA pairs in 88.2 ms