Protein–RNA interactions for Protein: Q9CU62

Smc1a, Structural maintenance of chromosomes protein 1A, mousemouse

Known RBP Predictions only

Length 1,233 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smc1aQ9CU62 AC158392.1-201ENSMUST00000223720 1069 ntBASIC4.37□□□□□ -1.71
Smc1aQ9CU62 AC129202.3-201ENSMUST00000224413 733 ntBASIC4.37□□□□□ -1.71
Smc1aQ9CU62 Olfr583-201ENSMUST00000098211 960 ntAPPRIS P1 BASIC4.37□□□□□ -1.71
Smc1aQ9CU62 Olfr598-202ENSMUST00000214765 2026 ntAPPRIS P1 TSL 5 BASIC4.37□□□□□ -1.71
Smc1aQ9CU62 Gm14062-201ENSMUST00000134795 4134 ntTSL 1 (best) BASIC4.37□□□□□ -1.71
Smc1aQ9CU62 Gm8104-201ENSMUST00000168165 1761 ntAPPRIS P1 TSL 5 BASIC4.37□□□□□ -1.71
Smc1aQ9CU62 Klra2-201ENSMUST00000032306 1799 ntAPPRIS P3 TSL 1 (best) BASIC4.37□□□□□ -1.71
Smc1aQ9CU62 D3Ertd254e-201ENSMUST00000165956 6503 ntTSL 3 BASIC4.37□□□□□ -1.71
Smc1aQ9CU62 Skint4-202ENSMUST00000106564 3997 ntAPPRIS ALT2 TSL 1 (best) BASIC4.37□□□□□ -1.71
Smc1aQ9CU62 Skint4-204ENSMUST00000106566 3997 ntAPPRIS P3 TSL 1 (best) BASIC4.37□□□□□ -1.71
Smc1aQ9CU62 Gm14305-203ENSMUST00000108983 1497 ntAPPRIS P1 TSL 3 BASIC4.37□□□□□ -1.71
Smc1aQ9CU62 Gm2026-202ENSMUST00000109008 1497 ntAPPRIS P1 TSL 5 BASIC4.37□□□□□ -1.71
Smc1aQ9CU62 Gm4724-202ENSMUST00000109046 1497 ntAPPRIS P1 TSL 5 BASIC4.37□□□□□ -1.71
Smc1aQ9CU62 Gm4631-201ENSMUST00000109050 1494 ntTSL 5 BASIC4.37□□□□□ -1.71
Smc1aQ9CU62 Gm14434-203ENSMUST00000122097 1497 ntAPPRIS P1 TSL 5 BASIC4.37□□□□□ -1.71
Smc1aQ9CU62 Gm11007-202ENSMUST00000178120 1497 ntAPPRIS P1 TSL 5 BASIC4.37□□□□□ -1.71
Smc1aQ9CU62 Gm2007-202ENSMUST00000178133 1497 ntAPPRIS P1 TSL 5 BASIC4.37□□□□□ -1.71
Smc1aQ9CU62 Gm11007-203ENSMUST00000185834 1494 ntTSL 5 BASIC4.37□□□□□ -1.71
Smc1aQ9CU62 Gm2007-203ENSMUST00000189494 1494 ntTSL 5 BASIC4.37□□□□□ -1.71
Smc1aQ9CU62 1110015O18Rik-202ENSMUST00000183944 1533 ntTSL 3 BASIC4.36□□□□□ -1.71
Smc1aQ9CU62 Mgat4c-212ENSMUST00000179929 4272 ntAPPRIS P1 TSL 5 BASIC4.36□□□□□ -1.71
Smc1aQ9CU62 Gm42728-201ENSMUST00000202644 1552 ntBASIC4.36□□□□□ -1.71
Smc1aQ9CU62 Olfr111-203ENSMUST00000215424 2548 ntAPPRIS P1 TSL 5 BASIC4.36□□□□□ -1.71
Smc1aQ9CU62 Zfp955a-201ENSMUST00000008830 1638 ntAPPRIS P1 TSL 1 (best) BASIC4.36□□□□□ -1.71
Smc1aQ9CU62 Zfp981-201ENSMUST00000105735 3038 ntAPPRIS P1 TSL 2 BASIC4.36□□□□□ -1.71
Smc1aQ9CU62 Cr2-212ENSMUST00000210219 4227 ntAPPRIS P1 TSL 5 BASIC4.36□□□□□ -1.71
Smc1aQ9CU62 Vwc2l-203ENSMUST00000161937 4323 ntTSL 1 (best) BASIC4.36□□□□□ -1.71
Smc1aQ9CU62 Mir690-201ENSMUST00000102110 109 ntBASIC4.36□□□□□ -1.71
Smc1aQ9CU62 Gm5943-201ENSMUST00000119458 459 ntBASIC4.36□□□□□ -1.71
Smc1aQ9CU62 Gm13080-201ENSMUST00000120556 420 ntBASIC4.36□□□□□ -1.71
Smc1aQ9CU62 Gm16068-201ENSMUST00000136557 504 ntTSL 3 BASIC4.36□□□□□ -1.71
Smc1aQ9CU62 Gm22135-201ENSMUST00000158752 108 ntBASIC4.36□□□□□ -1.71
Smc1aQ9CU62 Serpina3l-ps-201ENSMUST00000163975 1264 ntBASIC4.36□□□□□ -1.71
Smc1aQ9CU62 Gm20594-201ENSMUST00000179797 449 ntAPPRIS P1 BASIC4.36□□□□□ -1.71
Smc1aQ9CU62 Scgb2b21-201ENSMUST00000185407 520 ntAPPRIS P1 TSL 5 BASIC4.36□□□□□ -1.71
Smc1aQ9CU62 Gm9541-201ENSMUST00000188409 502 ntBASIC4.36□□□□□ -1.71
Smc1aQ9CU62 Sprr2g-202ENSMUST00000189634 651 ntTSL 1 (best) BASIC4.36□□□□□ -1.71
Smc1aQ9CU62 Gm37501-201ENSMUST00000192830 691 ntBASIC4.36□□□□□ -1.71
Smc1aQ9CU62 Gm9722-201ENSMUST00000194568 802 ntBASIC4.36□□□□□ -1.71
Smc1aQ9CU62 Gm37791-201ENSMUST00000195081 286 ntBASIC4.36□□□□□ -1.71
Smc1aQ9CU62 Smr2-202ENSMUST00000196070 813 ntAPPRIS ALT2 TSL 1 (best) BASIC4.36□□□□□ -1.71
Smc1aQ9CU62 Gm42451-201ENSMUST00000197410 244 ntBASIC4.36□□□□□ -1.71
Smc1aQ9CU62 Gm32877-201ENSMUST00000197419 709 ntTSL 5 BASIC4.36□□□□□ -1.71
Smc1aQ9CU62 Gm42453-201ENSMUST00000200477 409 ntBASIC4.36□□□□□ -1.71
Smc1aQ9CU62 Gm43975-201ENSMUST00000203023 481 ntBASIC4.36□□□□□ -1.71
Smc1aQ9CU62 Gm20177-201ENSMUST00000203705 334 ntBASIC4.36□□□□□ -1.71
Smc1aQ9CU62 Olfr1449-204ENSMUST00000215325 1149 ntAPPRIS P1 TSL 5 BASIC4.36□□□□□ -1.71
Smc1aQ9CU62 CT025680.1-201ENSMUST00000217375 375 ntBASIC4.36□□□□□ -1.71
Smc1aQ9CU62 Pah-204ENSMUST00000219813 789 ntTSL 3 BASIC4.36□□□□□ -1.71
Smc1aQ9CU62 AC154441.1-201ENSMUST00000223653 1006 ntBASIC4.36□□□□□ -1.71
Smc1aQ9CU62 4930447F04Rik-201ENSMUST00000033525 703 ntAPPRIS P1 TSL 1 (best) BASIC4.36□□□□□ -1.71
Smc1aQ9CU62 Senp7-201ENSMUST00000049128 1190 ntTSL 1 (best) BASIC4.36□□□□□ -1.71
Smc1aQ9CU62 Olfr873-201ENSMUST00000053919 1062 ntAPPRIS P2 BASIC4.36□□□□□ -1.71
Smc1aQ9CU62 Sprr2g-201ENSMUST00000056590 650 ntAPPRIS P1 TSL 5 BASIC4.36□□□□□ -1.71
Smc1aQ9CU62 Vmn1r35-201ENSMUST00000071414 891 ntAPPRIS P1 BASIC4.36□□□□□ -1.71
Smc1aQ9CU62 Gm22829-201ENSMUST00000083771 106 ntBASIC4.36□□□□□ -1.71
Smc1aQ9CU62 Gm10271-201ENSMUST00000092165 156 ntAPPRIS P1 TSL 5 BASIC4.36□□□□□ -1.71
Smc1aQ9CU62 Gm7381-201ENSMUST00000098958 300 ntBASIC4.36□□□□□ -1.71
Smc1aQ9CU62 Olfr781-202ENSMUST00000204108 1304 ntAPPRIS P1 TSL 3 BASIC4.36□□□□□ -1.71
Smc1aQ9CU62 Vmn1r185-207ENSMUST00000227695 5292 ntAPPRIS P1 BASIC4.36□□□□□ -1.71
Smc1aQ9CU62 Nlrp4c-201ENSMUST00000037728 3615 ntAPPRIS P1 TSL 1 (best) BASIC4.35□□□□□ -1.71
Smc1aQ9CU62 Olfr769-203ENSMUST00000216906 4325 ntAPPRIS P1 TSL 5 BASIC4.35□□□□□ -1.71
Smc1aQ9CU62 Trim30d-202ENSMUST00000071069 3282 ntTSL 1 (best) BASIC4.35□□□□□ -1.71
Smc1aQ9CU62 Gm12467-201ENSMUST00000117625 745 ntBASIC4.35□□□□□ -1.71
Smc1aQ9CU62 Gm11393-201ENSMUST00000118019 288 ntBASIC4.35□□□□□ -1.71
Smc1aQ9CU62 Gm13478-201ENSMUST00000118312 413 ntBASIC4.35□□□□□ -1.71
Smc1aQ9CU62 Gm14282-201ENSMUST00000119484 240 ntBASIC4.35□□□□□ -1.71
Smc1aQ9CU62 Gm11623-201ENSMUST00000120176 1225 ntBASIC4.35□□□□□ -1.71
Smc1aQ9CU62 Gm5392-201ENSMUST00000122189 789 ntBASIC4.35□□□□□ -1.71
Smc1aQ9CU62 Defa-ps12-201ENSMUST00000122353 193 ntBASIC4.35□□□□□ -1.71
Smc1aQ9CU62 Gm23792-201ENSMUST00000122557 93 ntBASIC4.35□□□□□ -1.71
Smc1aQ9CU62 Gm23365-201ENSMUST00000175019 125 ntBASIC4.35□□□□□ -1.71
Smc1aQ9CU62 Gm25960-201ENSMUST00000175110 125 ntBASIC4.35□□□□□ -1.71
Smc1aQ9CU62 Gm44453-201ENSMUST00000175161 126 ntBASIC4.35□□□□□ -1.71
Smc1aQ9CU62 Gm25195-201ENSMUST00000177656 126 ntBASIC4.35□□□□□ -1.71
Smc1aQ9CU62 Gm21809-201ENSMUST00000178495 468 ntBASIC4.35□□□□□ -1.71
Smc1aQ9CU62 Gm17467-201ENSMUST00000178553 468 ntAPPRIS P1 BASIC4.35□□□□□ -1.71
Smc1aQ9CU62 Gm17412-201ENSMUST00000179261 468 ntBASIC4.35□□□□□ -1.71
Smc1aQ9CU62 Gm17577-201ENSMUST00000179916 468 ntAPPRIS P1 BASIC4.35□□□□□ -1.71
Smc1aQ9CU62 Vmn1r181-201ENSMUST00000181796 1080 ntAPPRIS P1 BASIC4.35□□□□□ -1.71
Smc1aQ9CU62 Gm29408-201ENSMUST00000187536 216 ntBASIC4.35□□□□□ -1.71
Smc1aQ9CU62 Gm37005-201ENSMUST00000193281 1164 ntBASIC4.35□□□□□ -1.71
Smc1aQ9CU62 Gm37416-201ENSMUST00000193596 318 ntBASIC4.35□□□□□ -1.71
Smc1aQ9CU62 Gm37202-201ENSMUST00000193679 361 ntTSL 3 BASIC4.35□□□□□ -1.71
Smc1aQ9CU62 Gm38332-201ENSMUST00000194189 147 ntBASIC4.35□□□□□ -1.71
Smc1aQ9CU62 2900060B14Rik-201ENSMUST00000203191 616 ntBASIC4.35□□□□□ -1.71
Smc1aQ9CU62 4930598N05Rik-201ENSMUST00000207048 550 ntTSL 5 BASIC4.35□□□□□ -1.71
Smc1aQ9CU62 C030038I04Rik-201ENSMUST00000207840 740 ntBASIC4.35□□□□□ -1.71
Smc1aQ9CU62 Gm44548-201ENSMUST00000208929 192 ntBASIC4.35□□□□□ -1.71
Smc1aQ9CU62 1700042O05Rik-201ENSMUST00000219017 584 ntTSL 1 (best) BASIC4.35□□□□□ -1.71
Smc1aQ9CU62 Gm7540-201ENSMUST00000219764 926 ntBASIC4.35□□□□□ -1.71
Smc1aQ9CU62 Gm4036-201ENSMUST00000220842 626 ntBASIC4.35□□□□□ -1.71
Smc1aQ9CU62 AC153662.1-201ENSMUST00000222220 270 ntBASIC4.35□□□□□ -1.71
Smc1aQ9CU62 AC173481.1-201ENSMUST00000223351 270 ntBASIC4.35□□□□□ -1.71
Smc1aQ9CU62 Gm23975-201ENSMUST00000082685 106 ntBASIC4.35□□□□□ -1.71
Smc1aQ9CU62 Olfr993-201ENSMUST00000099926 945 ntAPPRIS P1 BASIC4.35□□□□□ -1.71
Smc1aQ9CU62 2410012E07Rik-201ENSMUST00000190896 1357 ntTSL 1 (best) BASIC4.35□□□□□ -1.71
Smc1aQ9CU62 Gm26853-201ENSMUST00000180757 4010 ntTSL 5 BASIC4.35□□□□□ -1.71
Smc1aQ9CU62 Gm28465-202ENSMUST00000220779 1701 ntTSL 5 BASIC4.35□□□□□ -1.71
Smc1aQ9CU62 Gm45792-201ENSMUST00000207795 4268 ntTSL 1 (best) BASIC4.35□□□□□ -1.71
Retrieved 100 of 76,532 protein–RNA pairs in 112 ms