Protein–RNA interactions for Protein: Q9CQ56

Use1, Vesicle transport protein USE1, mousemouse

Predictions only

Length 270 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Use1Q9CQ56 Spin2-ps4-201ENSMUST00000126395 762 ntBASIC3.54□□□□□ -1.84
Use1Q9CQ56 Spin2-ps3-201ENSMUST00000148147 762 ntBASIC3.54□□□□□ -1.84
Use1Q9CQ56 Ear-ps12-201ENSMUST00000161720 451 ntBASIC3.54□□□□□ -1.84
Use1Q9CQ56 Gm20476-201ENSMUST00000172644 492 ntTSL 2 BASIC3.54□□□□□ -1.84
Use1Q9CQ56 Gm18505-201ENSMUST00000187360 790 ntBASIC3.54□□□□□ -1.84
Use1Q9CQ56 Gm4035-202ENSMUST00000190684 526 ntTSL 1 (best) BASIC3.54□□□□□ -1.84
Use1Q9CQ56 Gm13266-203ENSMUST00000193364 421 ntTSL 3 BASIC3.54□□□□□ -1.84
Use1Q9CQ56 4930503O07Rik-201ENSMUST00000193395 578 ntTSL 1 (best) BASIC3.54□□□□□ -1.84
Use1Q9CQ56 Gm37209-201ENSMUST00000194109 1276 ntBASIC3.54□□□□□ -1.84
Use1Q9CQ56 Gm37290-201ENSMUST00000195775 339 ntBASIC3.54□□□□□ -1.84
Use1Q9CQ56 Gm42919-201ENSMUST00000197753 1284 ntBASIC3.54□□□□□ -1.84
Use1Q9CQ56 Gm43645-201ENSMUST00000200129 341 ntTSL 2 BASIC3.54□□□□□ -1.84
Use1Q9CQ56 Gm9375-201ENSMUST00000208899 903 ntBASIC3.54□□□□□ -1.84
Use1Q9CQ56 Gm39232-201ENSMUST00000210760 1012 ntTSL 5 BASIC3.54□□□□□ -1.84
Use1Q9CQ56 Gm7639-201ENSMUST00000212608 484 ntBASIC3.54□□□□□ -1.84
Use1Q9CQ56 Olfr907-202ENSMUST00000214003 1235 ntAPPRIS P1 TSL 3 BASIC3.54□□□□□ -1.84
Use1Q9CQ56 Gm30893-201ENSMUST00000220479 903 ntTSL 5 BASIC3.54□□□□□ -1.84
Use1Q9CQ56 Gstz1-204ENSMUST00000222222 724 ntAPPRIS ALT1 TSL 2 BASIC3.54□□□□□ -1.84
Use1Q9CQ56 Cdrt4-201ENSMUST00000035854 723 ntAPPRIS P1 TSL 1 (best) BASIC3.54□□□□□ -1.84
Use1Q9CQ56 Olfr833-ps1-201ENSMUST00000086493 913 ntBASIC3.54□□□□□ -1.84
Use1Q9CQ56 Postn-203ENSMUST00000107985 3205 ntAPPRIS ALT2 TSL 1 (best) BASIC3.54□□□□□ -1.84
Use1Q9CQ56 Mc2r-201ENSMUST00000052347 1562 ntAPPRIS P1 TSL 1 (best) BASIC3.54□□□□□ -1.84
Use1Q9CQ56 Gm18594-201ENSMUST00000175733 1403 ntBASIC3.53□□□□□ -1.84
Use1Q9CQ56 Vmn2r31-201ENSMUST00000075108 3660 ntAPPRIS P1 TSL 5 BASIC3.53□□□□□ -1.84
Use1Q9CQ56 Gm8734-201ENSMUST00000211669 1312 ntBASIC3.53□□□□□ -1.84
Use1Q9CQ56 AC159188.2-201ENSMUST00000224103 1301 ntBASIC3.53□□□□□ -1.84
Use1Q9CQ56 Gm11823-201ENSMUST00000130582 2278 ntTSL 1 (best) BASIC3.53□□□□□ -1.84
Use1Q9CQ56 Vmn2r-ps46-201ENSMUST00000172969 2556 ntBASIC3.53□□□□□ -1.84
Use1Q9CQ56 Ighv1-34-201ENSMUST00000103512 388 ntAPPRIS P1 BASIC3.53□□□□□ -1.84
Use1Q9CQ56 Gm24096-201ENSMUST00000103905 110 ntBASIC3.53□□□□□ -1.84
Use1Q9CQ56 Gm24469-201ENSMUST00000104487 131 ntBASIC3.53□□□□□ -1.84
Use1Q9CQ56 Olfr1288-201ENSMUST00000104889 939 ntAPPRIS P1 BASIC3.53□□□□□ -1.84
Use1Q9CQ56 Prl3c1-202ENSMUST00000110364 850 ntAPPRIS ALT2 TSL 1 (best) BASIC3.53□□□□□ -1.84
Use1Q9CQ56 Gm11488-201ENSMUST00000117277 863 ntBASIC3.53□□□□□ -1.84
Use1Q9CQ56 Gm7485-201ENSMUST00000119502 1109 ntBASIC3.53□□□□□ -1.84
Use1Q9CQ56 Gm11746-201ENSMUST00000119843 821 ntBASIC3.53□□□□□ -1.84
Use1Q9CQ56 Gm13511-201ENSMUST00000121167 363 ntBASIC3.53□□□□□ -1.84
Use1Q9CQ56 Gm16471-201ENSMUST00000121940 618 ntBASIC3.53□□□□□ -1.84
Use1Q9CQ56 Gm25386-201ENSMUST00000157814 288 ntBASIC3.53□□□□□ -1.84
Use1Q9CQ56 R3hcc1l-202ENSMUST00000160107 950 ntAPPRIS ALT2 TSL 2 BASIC3.53□□□□□ -1.84
Use1Q9CQ56 D6Ertd474e-203ENSMUST00000160188 683 ntTSL 3 BASIC3.53□□□□□ -1.84
Use1Q9CQ56 Gm25534-201ENSMUST00000175365 125 ntBASIC3.53□□□□□ -1.84
Use1Q9CQ56 Gm20701-201ENSMUST00000176082 347 ntBASIC3.53□□□□□ -1.84
Use1Q9CQ56 Otx2os1-201ENSMUST00000183522 866 ntTSL 3 BASIC3.53□□□□□ -1.84
Use1Q9CQ56 Gm27242-201ENSMUST00000184211 1151 ntTSL 1 (best) BASIC3.53□□□□□ -1.84
Use1Q9CQ56 Gm27538-201ENSMUST00000185065 294 ntBASIC3.53□□□□□ -1.84
Use1Q9CQ56 Gm28619-201ENSMUST00000185889 622 ntTSL 5 BASIC3.53□□□□□ -1.84
Use1Q9CQ56 4930521E06Rik-201ENSMUST00000186732 905 ntTSL 1 (best) BASIC3.53□□□□□ -1.84
Use1Q9CQ56 Gm28994-201ENSMUST00000188556 621 ntTSL 5 BASIC3.53□□□□□ -1.84
Use1Q9CQ56 Gm37231-201ENSMUST00000191716 621 ntTSL 1 (best) BASIC3.53□□□□□ -1.84
Use1Q9CQ56 Gm38159-202ENSMUST00000194145 621 ntTSL 5 BASIC3.53□□□□□ -1.84
Use1Q9CQ56 Gm37734-201ENSMUST00000194294 621 ntTSL 5 BASIC3.53□□□□□ -1.84
Use1Q9CQ56 Gm36941-202ENSMUST00000194799 621 ntTSL 1 (best) BASIC3.53□□□□□ -1.84
Use1Q9CQ56 Gm38363-202ENSMUST00000195029 622 ntTSL 5 BASIC3.53□□□□□ -1.84
Use1Q9CQ56 Ighv1-21-1-201ENSMUST00000195790 351 ntBASIC3.53□□□□□ -1.84
Use1Q9CQ56 Gm37378-202ENSMUST00000195795 621 ntTSL 5 BASIC3.53□□□□□ -1.84
Use1Q9CQ56 Gm37130-202ENSMUST00000195874 621 ntTSL 5 BASIC3.53□□□□□ -1.84
Use1Q9CQ56 Igkv12-47-201ENSMUST00000196961 356 ntBASIC3.53□□□□□ -1.84
Use1Q9CQ56 Gm42814-201ENSMUST00000199370 460 ntBASIC3.53□□□□□ -1.84
Use1Q9CQ56 Gm45063-201ENSMUST00000203726 472 ntBASIC3.53□□□□□ -1.84
Use1Q9CQ56 Lyrm1-209ENSMUST00000208424 888 ntAPPRIS P1 TSL 1 (best) BASIC3.53□□□□□ -1.84
Use1Q9CQ56 Gm45727-201ENSMUST00000212886 572 ntBASIC3.53□□□□□ -1.84
Use1Q9CQ56 AC149586.1-201ENSMUST00000222647 645 ntTSL 3 BASIC3.53□□□□□ -1.84
Use1Q9CQ56 AC122448.1-201ENSMUST00000226317 772 ntBASIC3.53□□□□□ -1.84
Use1Q9CQ56 AC139294.2-201ENSMUST00000227159 285 ntBASIC3.53□□□□□ -1.84
Use1Q9CQ56 AC154730.1-201ENSMUST00000227874 816 ntBASIC3.53□□□□□ -1.84
Use1Q9CQ56 AC137961.1-201ENSMUST00000227924 734 ntBASIC3.53□□□□□ -1.84
Use1Q9CQ56 Acbd7-202ENSMUST00000228935 534 ntAPPRIS ALT1 BASIC3.53□□□□□ -1.84
Use1Q9CQ56 Gm7204-201ENSMUST00000062591 600 ntBASIC3.53□□□□□ -1.84
Use1Q9CQ56 Snord22-201ENSMUST00000083153 126 ntBASIC3.53□□□□□ -1.84
Use1Q9CQ56 Olfr262-201ENSMUST00000087818 939 ntAPPRIS P1 BASIC3.53□□□□□ -1.84
Use1Q9CQ56 A430106G13Rik-201ENSMUST00000182158 3388 ntBASIC3.53□□□□□ -1.84
Use1Q9CQ56 Gm37204-201ENSMUST00000192389 3961 ntBASIC3.53□□□□□ -1.84
Use1Q9CQ56 AC116557.1-201ENSMUST00000219494 1521 ntBASIC3.53□□□□□ -1.84
Use1Q9CQ56 Vmn2r-ps47-201ENSMUST00000174515 2557 ntBASIC3.53□□□□□ -1.85
Use1Q9CQ56 Olfr516-203ENSMUST00000217279 1441 ntAPPRIS P1 TSL 5 BASIC3.53□□□□□ -1.85
Use1Q9CQ56 Gm15679-201ENSMUST00000161244 1936 ntTSL 1 (best) BASIC3.52□□□□□ -1.85
Use1Q9CQ56 Olfr1434-201ENSMUST00000207186 2714 ntAPPRIS P1 TSL 3 BASIC3.52□□□□□ -1.85
Use1Q9CQ56 Stk31-202ENSMUST00000163954 2988 ntAPPRIS ALT2 TSL 5 BASIC3.52□□□□□ -1.85
Use1Q9CQ56 Olfr194-203ENSMUST00000216519 3705 ntAPPRIS P1 TSL 5 BASIC3.52□□□□□ -1.85
Use1Q9CQ56 Trbv19-201ENSMUST00000103276 566 ntAPPRIS P1 BASIC3.52□□□□□ -1.85
Use1Q9CQ56 Igkv3-7-201ENSMUST00000103399 299 ntAPPRIS P1 BASIC3.52□□□□□ -1.85
Use1Q9CQ56 Gm10230-201ENSMUST00000119362 867 ntAPPRIS P1 TSL 1 (best) BASIC3.52□□□□□ -1.85
Use1Q9CQ56 Gm12252-201ENSMUST00000119517 219 ntBASIC3.52□□□□□ -1.85
Use1Q9CQ56 Gm11876-201ENSMUST00000120002 269 ntBASIC3.52□□□□□ -1.85
Use1Q9CQ56 Gm15323-201ENSMUST00000156109 429 ntTSL 3 BASIC3.52□□□□□ -1.85
Use1Q9CQ56 Gm26312-201ENSMUST00000157769 165 ntBASIC3.52□□□□□ -1.85
Use1Q9CQ56 Gm25436-201ENSMUST00000158275 145 ntBASIC3.52□□□□□ -1.85
Use1Q9CQ56 Sult2a4-202ENSMUST00000165167 964 ntAPPRIS P2 TSL 5 BASIC3.52□□□□□ -1.85
Use1Q9CQ56 Gm14819-202ENSMUST00000169396 639 ntAPPRIS P1 TSL 5 BASIC3.52□□□□□ -1.85
Use1Q9CQ56 Gm10487-201ENSMUST00000177566 639 ntAPPRIS P1 TSL 5 BASIC3.52□□□□□ -1.85
Use1Q9CQ56 Gm14632-202ENSMUST00000177917 639 ntAPPRIS P1 TSL 5 BASIC3.52□□□□□ -1.85
Use1Q9CQ56 Gm10058-202ENSMUST00000178152 639 ntAPPRIS P1 TSL 5 BASIC3.52□□□□□ -1.85
Use1Q9CQ56 Gm10096-201ENSMUST00000178672 639 ntAPPRIS P1 TSL 5 BASIC3.52□□□□□ -1.85
Use1Q9CQ56 Gm10230-202ENSMUST00000178745 639 ntAPPRIS P1 TSL 5 BASIC3.52□□□□□ -1.85
Use1Q9CQ56 Gm2092-201ENSMUST00000178887 639 ntBASIC3.52□□□□□ -1.85
Use1Q9CQ56 Gm20773-201ENSMUST00000178940 681 ntBASIC3.52□□□□□ -1.85
Use1Q9CQ56 Gm10147-202ENSMUST00000178966 639 ntAPPRIS P1 TSL 5 BASIC3.52□□□□□ -1.85
Use1Q9CQ56 Gm10067-201ENSMUST00000179462 348 ntBASIC3.52□□□□□ -1.85
Use1Q9CQ56 Gm2759-201ENSMUST00000179938 639 ntBASIC3.52□□□□□ -1.85
Retrieved 100 of 76,532 protein–RNA pairs in 94 ms