Protein–RNA interactions for Protein: Q8R5L3

Vps39, Vam6/Vps39-like protein, mousemouse

Predictions only

Length 886 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vps39Q8R5L3 Gm28786-201ENSMUST00000187228 172 ntTSL 1 (best) BASIC3.88□□□□□ -1.79
Vps39Q8R5L3 Gm5372-201ENSMUST00000187540 409 ntBASIC3.88□□□□□ -1.79
Vps39Q8R5L3 1700007K09Rik-202ENSMUST00000188899 680 ntAPPRIS P1 TSL 1 (best) BASIC3.88□□□□□ -1.79
Vps39Q8R5L3 1700025M24Rik-203ENSMUST00000191524 725 ntTSL 1 (best) BASIC3.88□□□□□ -1.79
Vps39Q8R5L3 Gm20203-201ENSMUST00000192352 332 ntBASIC3.88□□□□□ -1.79
Vps39Q8R5L3 Gm37005-201ENSMUST00000193281 1164 ntBASIC3.88□□□□□ -1.79
Vps39Q8R5L3 Gm37629-201ENSMUST00000193635 1050 ntBASIC3.88□□□□□ -1.79
Vps39Q8R5L3 Gm43853-201ENSMUST00000197162 301 ntBASIC3.88□□□□□ -1.79
Vps39Q8R5L3 Gm31831-202ENSMUST00000198581 278 ntTSL 5 BASIC3.88□□□□□ -1.79
Vps39Q8R5L3 Gm42516-201ENSMUST00000198691 767 ntBASIC3.88□□□□□ -1.79
Vps39Q8R5L3 4933402J10Rik-202ENSMUST00000198882 1167 ntTSL 1 (best) BASIC3.88□□□□□ -1.79
Vps39Q8R5L3 Gm44686-201ENSMUST00000206776 540 ntTSL 3 BASIC3.88□□□□□ -1.79
Vps39Q8R5L3 Gm18507-201ENSMUST00000218855 525 ntBASIC3.88□□□□□ -1.79
Vps39Q8R5L3 AC126043.1-201ENSMUST00000221304 1141 ntBASIC3.88□□□□□ -1.79
Vps39Q8R5L3 AC118006.1-201ENSMUST00000224211 501 ntBASIC3.88□□□□□ -1.79
Vps39Q8R5L3 Stfa1-201ENSMUST00000042097 418 ntAPPRIS P1 TSL 1 (best) BASIC3.88□□□□□ -1.79
Vps39Q8R5L3 Defb11-201ENSMUST00000051965 317 ntAPPRIS P1 TSL 1 (best) BASIC3.88□□□□□ -1.79
Vps39Q8R5L3 Olfr294-201ENSMUST00000078588 1008 ntAPPRIS P1 BASIC3.88□□□□□ -1.79
Vps39Q8R5L3 Gm25147-201ENSMUST00000083030 105 ntBASIC3.88□□□□□ -1.79
Vps39Q8R5L3 Snord22-201ENSMUST00000083153 126 ntBASIC3.88□□□□□ -1.79
Vps39Q8R5L3 n-R5s86-201ENSMUST00000083215 119 ntBASIC3.88□□□□□ -1.79
Vps39Q8R5L3 2410024N13Rik-201ENSMUST00000090704 669 ntBASIC3.88□□□□□ -1.79
Vps39Q8R5L3 Ugp2-202ENSMUST00000102875 2683 ntAPPRIS P1 TSL 1 (best) BASIC3.88□□□□□ -1.79
Vps39Q8R5L3 Mecom-203ENSMUST00000108271 3851 ntAPPRIS ALT2 TSL 1 (best) BASIC3.88□□□□□ -1.79
Vps39Q8R5L3 Gm20619-201ENSMUST00000175814 2008 ntTSL 1 (best) BASIC3.88□□□□□ -1.79
Vps39Q8R5L3 Vmn2r101-201ENSMUST00000171914 2574 ntAPPRIS P1 TSL 5 BASIC3.88□□□□□ -1.79
Vps39Q8R5L3 Vmn2r91-201ENSMUST00000172359 2571 ntAPPRIS P1 TSL 5 BASIC3.88□□□□□ -1.79
Vps39Q8R5L3 Gm15679-201ENSMUST00000161244 1936 ntTSL 1 (best) BASIC3.87□□□□□ -1.79
Vps39Q8R5L3 Gm7135-202ENSMUST00000191257 1905 ntBASIC3.87□□□□□ -1.79
Vps39Q8R5L3 Gm18594-201ENSMUST00000175733 1403 ntBASIC3.87□□□□□ -1.79
Vps39Q8R5L3 Vmn1r169-205ENSMUST00000228832 2749 ntAPPRIS P1 BASIC3.87□□□□□ -1.79
Vps39Q8R5L3 Olfr112-205ENSMUST00000213274 3558 ntAPPRIS P1 TSL 5 BASIC3.87□□□□□ -1.79
Vps39Q8R5L3 Sycp2-201ENSMUST00000081134 5717 ntAPPRIS P1 TSL 1 (best) BASIC3.87□□□□□ -1.79
Vps39Q8R5L3 Olfr1009-203ENSMUST00000216443 4047 ntAPPRIS P1 TSL 5 BASIC3.87□□□□□ -1.79
Vps39Q8R5L3 Igkv5-45-201ENSMUST00000103366 385 ntAPPRIS P1 BASIC3.87□□□□□ -1.79
Vps39Q8R5L3 Gm23948-201ENSMUST00000104030 132 ntBASIC3.87□□□□□ -1.79
Vps39Q8R5L3 Gm15151-201ENSMUST00000117106 177 ntBASIC3.87□□□□□ -1.79
Vps39Q8R5L3 Gm649-201ENSMUST00000117284 1054 ntBASIC3.87□□□□□ -1.79
Vps39Q8R5L3 Cyp2j7-ps2-201ENSMUST00000119189 179 ntBASIC3.87□□□□□ -1.79
Vps39Q8R5L3 Gm11708-201ENSMUST00000119530 832 ntBASIC3.87□□□□□ -1.79
Vps39Q8R5L3 Gm13852-201ENSMUST00000122350 242 ntBASIC3.87□□□□□ -1.79
Vps39Q8R5L3 Gm25104-201ENSMUST00000122476 163 ntBASIC3.87□□□□□ -1.79
Vps39Q8R5L3 Gm16250-201ENSMUST00000148974 256 ntBASIC3.87□□□□□ -1.79
Vps39Q8R5L3 Gm24014-201ENSMUST00000157728 157 ntBASIC3.87□□□□□ -1.79
Vps39Q8R5L3 R3hcc1l-202ENSMUST00000160107 950 ntAPPRIS ALT2 TSL 2 BASIC3.87□□□□□ -1.79
Vps39Q8R5L3 Serpina3l-ps-201ENSMUST00000163975 1264 ntBASIC3.87□□□□□ -1.79
Vps39Q8R5L3 Olfr325-201ENSMUST00000169428 1065 ntAPPRIS P1 BASIC3.87□□□□□ -1.79
Vps39Q8R5L3 Gm24417-201ENSMUST00000178123 79 ntBASIC3.87□□□□□ -1.79
Vps39Q8R5L3 Gm24653-201ENSMUST00000178541 79 ntBASIC3.87□□□□□ -1.79
Vps39Q8R5L3 Gm25934-201ENSMUST00000178642 79 ntBASIC3.87□□□□□ -1.79
Vps39Q8R5L3 Gm26556-201ENSMUST00000180645 320 ntBASIC3.87□□□□□ -1.79
Vps39Q8R5L3 Mir6963-201ENSMUST00000183535 71 ntBASIC3.87□□□□□ -1.79
Vps39Q8R5L3 1700029E06Rik-201ENSMUST00000189036 757 ntTSL 1 (best) BASIC3.87□□□□□ -1.79
Vps39Q8R5L3 Gm36467-202ENSMUST00000195606 622 ntTSL 1 (best) BASIC3.87□□□□□ -1.79
Vps39Q8R5L3 Gm4248-201ENSMUST00000196905 316 ntBASIC3.87□□□□□ -1.79
Vps39Q8R5L3 Gm8820-201ENSMUST00000204077 571 ntBASIC3.87□□□□□ -1.79
Vps39Q8R5L3 Gm3189-201ENSMUST00000205595 832 ntBASIC3.87□□□□□ -1.79
Vps39Q8R5L3 Gm8745-201ENSMUST00000207846 782 ntBASIC3.87□□□□□ -1.79
Vps39Q8R5L3 Gm18016-201ENSMUST00000216119 801 ntBASIC3.87□□□□□ -1.79
Vps39Q8R5L3 AC154838.1-201ENSMUST00000228944 911 ntBASIC3.87□□□□□ -1.79
Vps39Q8R5L3 Gm22868-201ENSMUST00000083955 164 ntBASIC3.87□□□□□ -1.79
Vps39Q8R5L3 Vmn2r125-201ENSMUST00000096794 1110 ntAPPRIS P1 TSL 5 BASIC3.87□□□□□ -1.79
Vps39Q8R5L3 Vmn2r-ps45-201ENSMUST00000174138 2435 ntBASIC3.87□□□□□ -1.79
Vps39Q8R5L3 Ktn1-226ENSMUST00000191511 3962 ntAPPRIS ALT2 TSL 5 BASIC3.87□□□□□ -1.79
Vps39Q8R5L3 Olfr1140-203ENSMUST00000217572 1327 ntAPPRIS P1 BASIC3.87□□□□□ -1.79
Vps39Q8R5L3 Vmn1r185-207ENSMUST00000227695 5292 ntAPPRIS P1 BASIC3.87□□□□□ -1.79
Vps39Q8R5L3 Gm4724-201ENSMUST00000109045 1659 ntAPPRIS P1 TSL 2 BASIC3.87□□□□□ -1.79
Vps39Q8R5L3 Olfr1318-201ENSMUST00000058176 1690 ntAPPRIS P1 BASIC3.87□□□□□ -1.79
Vps39Q8R5L3 Trhr-202ENSMUST00000110289 1745 ntAPPRIS P1 TSL 2 BASIC3.87□□□□□ -1.79
Vps39Q8R5L3 Olfr801-204ENSMUST00000216067 4014 ntAPPRIS P1 TSL 5 BASIC3.86□□□□□ -1.79
Vps39Q8R5L3 Gm16794-203ENSMUST00000185324 1490 ntTSL 1 (best) BASIC3.86□□□□□ -1.79
Vps39Q8R5L3 AC124572.2-201ENSMUST00000218041 5152 ntBASIC3.86□□□□□ -1.79
Vps39Q8R5L3 Hfm1-202ENSMUST00000117588 4870 ntAPPRIS P1 TSL 5 BASIC3.86□□□□□ -1.79
Vps39Q8R5L3 AC116557.1-201ENSMUST00000219494 1521 ntBASIC3.86□□□□□ -1.79
Vps39Q8R5L3 A830011K09Rik-202ENSMUST00000162868 2201 ntTSL 1 (best) BASIC3.86□□□□□ -1.79
Vps39Q8R5L3 Erbin-205ENSMUST00000188997 5084 ntAPPRIS ALT2 TSL 1 (best) BASIC3.86□□□□□ -1.79
Vps39Q8R5L3 Gm4788-201ENSMUST00000027612 2958 ntAPPRIS ALT2 TSL 1 (best) BASIC3.86□□□□□ -1.79
Vps39Q8R5L3 Tcrg-C1-201ENSMUST00000103558 924 ntAPPRIS P1 BASIC3.86□□□□□ -1.79
Vps39Q8R5L3 Gm14406-201ENSMUST00000108943 531 ntTSL 2 BASIC3.86□□□□□ -1.79
Vps39Q8R5L3 Gm12495-201ENSMUST00000119750 447 ntBASIC3.86□□□□□ -1.79
Vps39Q8R5L3 Gm13865-201ENSMUST00000120957 865 ntBASIC3.86□□□□□ -1.79
Vps39Q8R5L3 Gm11645-201ENSMUST00000121589 649 ntBASIC3.86□□□□□ -1.79
Vps39Q8R5L3 Gm15488-201ENSMUST00000121682 670 ntBASIC3.86□□□□□ -1.79
Vps39Q8R5L3 9030204H09Rik-201ENSMUST00000139455 653 ntTSL 1 (best) BASIC3.86□□□□□ -1.79
Vps39Q8R5L3 Gm21814-201ENSMUST00000144085 291 ntTSL 5 BASIC3.86□□□□□ -1.79
Vps39Q8R5L3 Gm12603-202ENSMUST00000146678 618 ntTSL 1 (best) BASIC3.86□□□□□ -1.79
Vps39Q8R5L3 Gm22219-201ENSMUST00000157562 319 ntBASIC3.86□□□□□ -1.79
Vps39Q8R5L3 Gm25555-201ENSMUST00000158078 111 ntBASIC3.86□□□□□ -1.79
Vps39Q8R5L3 Gm25713-201ENSMUST00000158625 109 ntBASIC3.86□□□□□ -1.79
Vps39Q8R5L3 Gm9587-201ENSMUST00000172449 454 ntBASIC3.86□□□□□ -1.79
Vps39Q8R5L3 Gm38393-201ENSMUST00000179360 1199 ntAPPRIS P5 TSL 5 BASIC3.86□□□□□ -1.79
Vps39Q8R5L3 Trav17-202ENSMUST00000186545 338 ntAPPRIS ALT2 BASIC3.86□□□□□ -1.79
Vps39Q8R5L3 Gm28267-201ENSMUST00000191093 265 ntBASIC3.86□□□□□ -1.79
Vps39Q8R5L3 Gm8790-201ENSMUST00000194108 322 ntBASIC3.86□□□□□ -1.79
Vps39Q8R5L3 9530022L04Rik-201ENSMUST00000194340 310 ntBASIC3.86□□□□□ -1.79
Vps39Q8R5L3 Gm44354-201ENSMUST00000196017 143 ntBASIC3.86□□□□□ -1.79
Vps39Q8R5L3 Gm20177-201ENSMUST00000203705 334 ntBASIC3.86□□□□□ -1.79
Vps39Q8R5L3 Gm45063-201ENSMUST00000203726 472 ntBASIC3.86□□□□□ -1.79
Vps39Q8R5L3 Gm45209-201ENSMUST00000207122 353 ntBASIC3.86□□□□□ -1.79
Vps39Q8R5L3 Olfr1434-203ENSMUST00000208197 1229 ntAPPRIS P1 BASIC3.86□□□□□ -1.79
Retrieved 100 of 76,532 protein–RNA pairs in 63.2 ms