Protein–RNA interactions for Protein: Q8C9S8

Atg4a, Cysteine protease ATG4A, mousemouse

Predictions only

Length 396 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Atg4aQ8C9S8 Vmn1r51-207ENSMUST00000227766 4218 ntAPPRIS P1 BASIC4.5□□□□□ -1.69
Atg4aQ8C9S8 Gm16294-201ENSMUST00000070382 1459 ntTSL 2 BASIC4.49□□□□□ -1.69
Atg4aQ8C9S8 Fbxw28-204ENSMUST00000200156 1330 ntAPPRIS ALT2 TSL 1 (best) BASIC4.49□□□□□ -1.69
Atg4aQ8C9S8 Nlrp9a-204ENSMUST00000122040 2850 ntAPPRIS ALT2 TSL 1 (best) BASIC4.49□□□□□ -1.69
Atg4aQ8C9S8 Mecom-203ENSMUST00000108271 3851 ntAPPRIS ALT2 TSL 1 (best) BASIC4.49□□□□□ -1.69
Atg4aQ8C9S8 Gm5346-201ENSMUST00000056023 2326 ntAPPRIS P1 BASIC4.49□□□□□ -1.69
Atg4aQ8C9S8 Olfr1012-203ENSMUST00000214958 3076 ntAPPRIS P1 TSL 3 BASIC4.49□□□□□ -1.69
Atg4aQ8C9S8 Prl2c2-201ENSMUST00000110594 842 ntAPPRIS P1 TSL 1 (best) BASIC4.49□□□□□ -1.69
Atg4aQ8C9S8 Olfr475-ps1-201ENSMUST00000117982 932 ntAPPRIS P1 BASIC4.49□□□□□ -1.69
Atg4aQ8C9S8 Gm8475-201ENSMUST00000118211 526 ntBASIC4.49□□□□□ -1.69
Atg4aQ8C9S8 Gm14986-201ENSMUST00000121262 1002 ntBASIC4.49□□□□□ -1.69
Atg4aQ8C9S8 Gm15860-202ENSMUST00000137257 506 ntTSL 3 BASIC4.49□□□□□ -1.69
Atg4aQ8C9S8 Gm23084-201ENSMUST00000157850 114 ntBASIC4.49□□□□□ -1.69
Atg4aQ8C9S8 Gm22789-201ENSMUST00000157884 130 ntBASIC4.49□□□□□ -1.69
Atg4aQ8C9S8 Gm3123-201ENSMUST00000163480 480 ntBASIC4.49□□□□□ -1.69
Atg4aQ8C9S8 Gm27903-201ENSMUST00000175482 126 ntBASIC4.49□□□□□ -1.69
Atg4aQ8C9S8 2210017I01Rik-201ENSMUST00000195278 822 ntAPPRIS P1 TSL 1 (best) BASIC4.49□□□□□ -1.69
Atg4aQ8C9S8 Gm34701-202ENSMUST00000204685 360 ntBASIC4.49□□□□□ -1.69
Atg4aQ8C9S8 Fcf1-201ENSMUST00000021669 749 ntAPPRIS P1 TSL 1 (best) BASIC4.49□□□□□ -1.69
Atg4aQ8C9S8 AC154313.1-201ENSMUST00000217755 3841 ntBASIC4.49□□□□□ -1.69
Atg4aQ8C9S8 Gm35865-201ENSMUST00000220180 287 ntTSL 3 BASIC4.49□□□□□ -1.69
Atg4aQ8C9S8 AC140344.1-201ENSMUST00000223384 387 ntBASIC4.49□□□□□ -1.69
Atg4aQ8C9S8 Tpbpb-201ENSMUST00000080766 850 ntAPPRIS P2 TSL 1 (best) BASIC4.49□□□□□ -1.69
Atg4aQ8C9S8 mt-Co2-201ENSMUST00000082405 684 ntAPPRIS P1 BASIC4.49□□□□□ -1.69
Atg4aQ8C9S8 Gm23975-201ENSMUST00000082685 106 ntBASIC4.49□□□□□ -1.69
Atg4aQ8C9S8 Olfr501-ps1-201ENSMUST00000094105 946 ntAPPRIS P1 BASIC4.49□□□□□ -1.69
Atg4aQ8C9S8 Gm36529-201ENSMUST00000222495 1529 ntTSL 1 (best) BASIC4.49□□□□□ -1.69
Atg4aQ8C9S8 Tc2n-202ENSMUST00000160715 1386 ntTSL 5 BASIC4.49□□□□□ -1.69
Atg4aQ8C9S8 Olfr125-202ENSMUST00000213857 3835 ntAPPRIS P1 TSL 5 BASIC4.49□□□□□ -1.69
Atg4aQ8C9S8 AC132336.1-201ENSMUST00000222844 1740 ntBASIC4.49□□□□□ -1.69
Atg4aQ8C9S8 Zfp942-201ENSMUST00000074295 1461 ntAPPRIS P1 TSL 5 BASIC4.49□□□□□ -1.69
Atg4aQ8C9S8 Olfr1242-204ENSMUST00000216001 2569 ntAPPRIS P1 TSL 5 BASIC4.49□□□□□ -1.69
Atg4aQ8C9S8 Gm6634-201ENSMUST00000180497 1804 ntTSL 1 (best) BASIC4.49□□□□□ -1.69
Atg4aQ8C9S8 Psg25-201ENSMUST00000094795 3109 ntAPPRIS P1 TSL 1 (best) BASIC4.48□□□□□ -1.69
Atg4aQ8C9S8 Gm7648-201ENSMUST00000173036 1658 ntBASIC4.48□□□□□ -1.69
Atg4aQ8C9S8 Olfr729-202ENSMUST00000213163 4283 ntAPPRIS P1 TSL 5 BASIC4.48□□□□□ -1.69
Atg4aQ8C9S8 Gm5447-201ENSMUST00000070258 1773 ntAPPRIS P1 BASIC4.48□□□□□ -1.69
Atg4aQ8C9S8 2410141K09Rik-202ENSMUST00000172579 2587 ntAPPRIS P1 TSL 3 BASIC4.48□□□□□ -1.69
Atg4aQ8C9S8 Trav7n-4-201ENSMUST00000103609 341 ntAPPRIS P1 BASIC4.48□□□□□ -1.69
Atg4aQ8C9S8 Gm12584-201ENSMUST00000117109 1105 ntBASIC4.48□□□□□ -1.69
Atg4aQ8C9S8 Gm14656-201ENSMUST00000120342 502 ntBASIC4.48□□□□□ -1.69
Atg4aQ8C9S8 Gm12880-201ENSMUST00000120652 494 ntBASIC4.48□□□□□ -1.69
Atg4aQ8C9S8 Gm13459-201ENSMUST00000121558 646 ntBASIC4.48□□□□□ -1.69
Atg4aQ8C9S8 Gm11479-201ENSMUST00000134275 387 ntTSL 1 (best) BASIC4.48□□□□□ -1.69
Atg4aQ8C9S8 Slc9c1-201ENSMUST00000159945 3836 ntAPPRIS P1 TSL 1 (best) BASIC4.48□□□□□ -1.69
Atg4aQ8C9S8 Gm1553-201ENSMUST00000177934 658 ntAPPRIS P1 TSL 1 (best) BASIC4.48□□□□□ -1.69
Atg4aQ8C9S8 9330182O14Rik-201ENSMUST00000179120 423 ntAPPRIS P1 TSL 5 BASIC4.48□□□□□ -1.69
Atg4aQ8C9S8 Gm26746-201ENSMUST00000181722 487 ntBASIC4.48□□□□□ -1.69
Atg4aQ8C9S8 Gm3454-201ENSMUST00000185571 412 ntBASIC4.48□□□□□ -1.69
Atg4aQ8C9S8 Gm18340-201ENSMUST00000196342 609 ntBASIC4.48□□□□□ -1.69
Atg4aQ8C9S8 Cyp3a63-ps-201ENSMUST00000196626 1170 ntBASIC4.48□□□□□ -1.69
Atg4aQ8C9S8 Gm3143-202ENSMUST00000198364 675 ntTSL 2 BASIC4.48□□□□□ -1.69
Atg4aQ8C9S8 Gm42567-201ENSMUST00000199268 352 ntTSL 3 BASIC4.48□□□□□ -1.69
Atg4aQ8C9S8 Olfr1089-201ENSMUST00000214317 1118 ntAPPRIS P1 BASIC4.48□□□□□ -1.69
Atg4aQ8C9S8 AC107864.1-201ENSMUST00000217937 496 ntBASIC4.48□□□□□ -1.69
Atg4aQ8C9S8 AC159472.1-201ENSMUST00000218178 463 ntBASIC4.48□□□□□ -1.69
Atg4aQ8C9S8 AC141884.1-201ENSMUST00000226327 636 ntBASIC4.48□□□□□ -1.69
Atg4aQ8C9S8 AC102815.1-201ENSMUST00000226662 1061 ntBASIC4.48□□□□□ -1.69
Atg4aQ8C9S8 Gm10491-201ENSMUST00000085330 117 ntAPPRIS P1 TSL 5 BASIC4.48□□□□□ -1.69
Atg4aQ8C9S8 Gm904-201ENSMUST00000099519 649 ntAPPRIS P1 TSL 1 (best) BASIC4.48□□□□□ -1.69
Atg4aQ8C9S8 Slfn8-201ENSMUST00000038141 4011 ntAPPRIS P1 TSL 1 (best) BASIC4.48□□□□□ -1.69
Atg4aQ8C9S8 2410012E07Rik-201ENSMUST00000190896 1357 ntTSL 1 (best) BASIC4.48□□□□□ -1.69
Atg4aQ8C9S8 Mkln1-201ENSMUST00000026699 11395 ntAPPRIS P1 TSL 1 (best) BASIC4.48□□□□□ -1.69
Atg4aQ8C9S8 Olfr575-203ENSMUST00000216420 3500 ntAPPRIS P1 TSL 5 BASIC4.48□□□□□ -1.69
Atg4aQ8C9S8 Cbll1-204ENSMUST00000185739 3945 ntAPPRIS ALT1 TSL 1 (best) BASIC4.48□□□□□ -1.69
Atg4aQ8C9S8 AC131720.1-201ENSMUST00000218629 2132 ntBASIC4.48□□□□□ -1.69
Atg4aQ8C9S8 Vmn1r62-201ENSMUST00000173956 1757 ntAPPRIS P1 BASIC4.48□□□□□ -1.69
Atg4aQ8C9S8 Oog3-201ENSMUST00000050933 1865 ntAPPRIS P1 TSL 1 (best) BASIC4.47□□□□□ -1.69
Atg4aQ8C9S8 Gm37268-201ENSMUST00000192254 2614 ntBASIC4.47□□□□□ -1.69
Atg4aQ8C9S8 Nlrp14-201ENSMUST00000084763 3272 ntAPPRIS P1 TSL 1 (best) BASIC4.47□□□□□ -1.69
Atg4aQ8C9S8 Olfr876-203ENSMUST00000215287 4474 ntAPPRIS P1 TSL 5 BASIC4.47□□□□□ -1.69
Atg4aQ8C9S8 Vmn1r172-201ENSMUST00000038694 9009 ntAPPRIS P1 TSL 1 (best) BASIC4.47□□□□□ -1.69
Atg4aQ8C9S8 Gm24935-201ENSMUST00000103770 110 ntBASIC4.47□□□□□ -1.69
Atg4aQ8C9S8 Olfr828-201ENSMUST00000104914 939 ntAPPRIS P1 BASIC4.47□□□□□ -1.69
Atg4aQ8C9S8 Gm13973-201ENSMUST00000121371 894 ntBASIC4.47□□□□□ -1.69
Atg4aQ8C9S8 Prl2c5-202ENSMUST00000126540 971 ntAPPRIS ALT2 TSL 1 (best) BASIC4.47□□□□□ -1.69
Atg4aQ8C9S8 Gm15656-201ENSMUST00000132076 615 ntTSL 3 BASIC4.47□□□□□ -1.69
Atg4aQ8C9S8 Gm16212-202ENSMUST00000143555 420 ntTSL 3 BASIC4.47□□□□□ -1.69
Atg4aQ8C9S8 Gm16084-201ENSMUST00000148122 620 ntTSL 3 BASIC4.47□□□□□ -1.69
Atg4aQ8C9S8 Gm23123-201ENSMUST00000157648 144 ntBASIC4.47□□□□□ -1.69
Atg4aQ8C9S8 Gm24727-201ENSMUST00000158231 144 ntBASIC4.47□□□□□ -1.69
Atg4aQ8C9S8 Gm10357-201ENSMUST00000159886 264 ntBASIC4.47□□□□□ -1.69
Atg4aQ8C9S8 Skint3-202ENSMUST00000170945 3843 ntAPPRIS ALT2 TSL 1 (best) BASIC4.47□□□□□ -1.69
Atg4aQ8C9S8 Olfr625-ps1-202ENSMUST00000190218 927 ntAPPRIS ALT2 BASIC4.47□□□□□ -1.69
Atg4aQ8C9S8 Gm20915-201ENSMUST00000191575 663 ntBASIC4.47□□□□□ -1.69
Atg4aQ8C9S8 Gm38166-201ENSMUST00000191660 471 ntBASIC4.47□□□□□ -1.69
Atg4aQ8C9S8 Gm37576-201ENSMUST00000194228 372 ntBASIC4.47□□□□□ -1.69
Atg4aQ8C9S8 Gm567-201ENSMUST00000197127 469 ntTSL 3 BASIC4.47□□□□□ -1.69
Atg4aQ8C9S8 Gm4859-201ENSMUST00000199625 787 ntBASIC4.47□□□□□ -1.69
Atg4aQ8C9S8 Gm8319-201ENSMUST00000205708 641 ntBASIC4.47□□□□□ -1.69
Atg4aQ8C9S8 Gm44748-201ENSMUST00000206040 658 ntTSL 5 BASIC4.47□□□□□ -1.69
Atg4aQ8C9S8 Gm45379-201ENSMUST00000211772 549 ntBASIC4.47□□□□□ -1.69
Atg4aQ8C9S8 Gm26564-201ENSMUST00000216701 378 ntTSL 3 BASIC4.47□□□□□ -1.69
Atg4aQ8C9S8 Gm46103-201ENSMUST00000217614 341 ntBASIC4.47□□□□□ -1.69
Atg4aQ8C9S8 AC139638.1-201ENSMUST00000218027 364 ntBASIC4.47□□□□□ -1.69
Atg4aQ8C9S8 Sult1e1-201ENSMUST00000031201 1242 ntAPPRIS P1 TSL 1 (best) BASIC4.47□□□□□ -1.69
Atg4aQ8C9S8 Klra7-201ENSMUST00000032286 1042 ntAPPRIS ALT2 TSL 1 (best) BASIC4.47□□□□□ -1.69
Atg4aQ8C9S8 Olfr617-201ENSMUST00000048265 957 ntAPPRIS P1 BASIC4.47□□□□□ -1.69
Atg4aQ8C9S8 Cldn34c4-201ENSMUST00000052500 814 ntAPPRIS P1 TSL 1 (best) BASIC4.47□□□□□ -1.69
Atg4aQ8C9S8 Olfr921-201ENSMUST00000071681 1181 ntAPPRIS P1 BASIC4.47□□□□□ -1.69
Retrieved 100 of 76,532 protein–RNA pairs in 76 ms