Protein–RNA interactions for Protein: Q8BWR4

Usp40, Ubiquitin carboxyl-terminal hydrolase 40, mousemouse

Predictions only

Length 1,235 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp40Q8BWR4 Vmn1r-ps149-201ENSMUST00000176997 183 ntBASIC6.16□□□□□ -1.42
Usp40Q8BWR4 Rpl23a-ps12-201ENSMUST00000179178 468 ntBASIC6.16□□□□□ -1.42
Usp40Q8BWR4 Mir6537-201ENSMUST00000184150 110 ntBASIC6.16□□□□□ -1.42
Usp40Q8BWR4 Gm29031-201ENSMUST00000185316 614 ntBASIC6.16□□□□□ -1.42
Usp40Q8BWR4 Gm29000-201ENSMUST00000185444 614 ntBASIC6.16□□□□□ -1.42
Usp40Q8BWR4 Gm28204-201ENSMUST00000185934 614 ntBASIC6.16□□□□□ -1.42
Usp40Q8BWR4 Gm28290-201ENSMUST00000186505 614 ntBASIC6.16□□□□□ -1.42
Usp40Q8BWR4 Gm28161-201ENSMUST00000186669 614 ntBASIC6.16□□□□□ -1.42
Usp40Q8BWR4 Ly6a-203ENSMUST00000187171 853 ntAPPRIS P1 TSL 1 (best) BASIC6.16□□□□□ -1.42
Usp40Q8BWR4 Gm5116-201ENSMUST00000187732 463 ntBASIC6.16□□□□□ -1.42
Usp40Q8BWR4 Gm29627-201ENSMUST00000187984 463 ntBASIC6.16□□□□□ -1.42
Usp40Q8BWR4 Gm9443-201ENSMUST00000188406 816 ntBASIC6.16□□□□□ -1.42
Usp40Q8BWR4 Gm28749-209ENSMUST00000189599 614 ntBASIC6.16□□□□□ -1.42
Usp40Q8BWR4 Gm38050-201ENSMUST00000191904 238 ntBASIC6.16□□□□□ -1.42
Usp40Q8BWR4 Gm33163-201ENSMUST00000194504 614 ntBASIC6.16□□□□□ -1.42
Usp40Q8BWR4 Gm42924-201ENSMUST00000197261 185 ntBASIC6.16□□□□□ -1.42
Usp40Q8BWR4 Trav7-5-201ENSMUST00000200609 337 ntAPPRIS P1 BASIC6.16□□□□□ -1.42
Usp40Q8BWR4 Gm5876-201ENSMUST00000203735 243 ntBASIC6.16□□□□□ -1.42
Usp40Q8BWR4 Gm44133-201ENSMUST00000203823 701 ntTSL 2 BASIC6.16□□□□□ -1.42
Usp40Q8BWR4 Gm30784-201ENSMUST00000204491 794 ntTSL 2 BASIC6.16□□□□□ -1.42
Usp40Q8BWR4 Olfr712-ps1-201ENSMUST00000207690 950 ntBASIC6.16□□□□□ -1.42
Usp40Q8BWR4 Olfr593-202ENSMUST00000210686 951 ntAPPRIS ALT2 BASIC6.16□□□□□ -1.42
Usp40Q8BWR4 AC134334.1-201ENSMUST00000214277 255 ntBASIC6.16□□□□□ -1.42
Usp40Q8BWR4 Olfr1070-ps1-201ENSMUST00000215939 388 ntBASIC6.16□□□□□ -1.42
Usp40Q8BWR4 Gm29818-201ENSMUST00000218070 165 ntBASIC6.16□□□□□ -1.42
Usp40Q8BWR4 Gm18113-201ENSMUST00000220630 303 ntBASIC6.16□□□□□ -1.42
Usp40Q8BWR4 Olfr136-201ENSMUST00000077203 939 ntAPPRIS P1 BASIC6.16□□□□□ -1.42
Usp40Q8BWR4 Olfr506-201ENSMUST00000077343 1008 ntAPPRIS P1 BASIC6.16□□□□□ -1.42
Usp40Q8BWR4 Mir383-201ENSMUST00000083523 70 ntBASIC6.16□□□□□ -1.42
Usp40Q8BWR4 Olfr593-201ENSMUST00000098206 984 ntAPPRIS P2 BASIC6.16□□□□□ -1.42
Usp40Q8BWR4 Vmn1r90-202ENSMUST00000226264 7796 ntAPPRIS P2 BASIC6.16□□□□□ -1.42
Usp40Q8BWR4 Clca4b-201ENSMUST00000098549 2997 ntAPPRIS P1 TSL 1 (best) BASIC6.16□□□□□ -1.42
Usp40Q8BWR4 Cyp2j12-201ENSMUST00000097972 1675 ntAPPRIS P1 TSL 5 BASIC6.16□□□□□ -1.42
Usp40Q8BWR4 Olfr430-202ENSMUST00000213425 3873 ntAPPRIS P1 TSL 5 BASIC6.16□□□□□ -1.42
Usp40Q8BWR4 Rd3l-203ENSMUST00000189759 1427 ntAPPRIS P1 TSL 1 (best) BASIC6.16□□□□□ -1.42
Usp40Q8BWR4 Klhl13-201ENSMUST00000035973 2996 ntTSL 5 BASIC6.15□□□□□ -1.42
Usp40Q8BWR4 Gm36229-201ENSMUST00000218737 1855 ntTSL 1 (best) BASIC6.15□□□□□ -1.42
Usp40Q8BWR4 Gm14988-201ENSMUST00000117224 1548 ntBASIC6.15□□□□□ -1.42
Usp40Q8BWR4 Gm42520-201ENSMUST00000199642 1502 ntBASIC6.15□□□□□ -1.42
Usp40Q8BWR4 AC142245.1-201ENSMUST00000226611 1505 ntBASIC6.15□□□□□ -1.42
Usp40Q8BWR4 Gm42991-201ENSMUST00000196468 3837 ntBASIC6.15□□□□□ -1.42
Usp40Q8BWR4 Fap-202ENSMUST00000102732 2751 ntAPPRIS P2 TSL 1 (best) BASIC6.15□□□□□ -1.42
Usp40Q8BWR4 Gm43024-201ENSMUST00000196770 4352 ntBASIC6.15□□□□□ -1.42
Usp40Q8BWR4 Olfr273-202ENSMUST00000107670 4796 ntAPPRIS P1 TSL 5 BASIC6.15□□□□□ -1.42
Usp40Q8BWR4 Creb5-203ENSMUST00000203528 7917 ntAPPRIS P2 TSL 5 BASIC6.15□□□□□ -1.42
Usp40Q8BWR4 Gm42910-201ENSMUST00000198917 2921 ntBASIC6.15□□□□□ -1.42
Usp40Q8BWR4 Igkv12-98-201ENSMUST00000103327 344 ntAPPRIS ALT2 BASIC6.15□□□□□ -1.42
Usp40Q8BWR4 Gm15426-201ENSMUST00000117823 556 ntBASIC6.15□□□□□ -1.42
Usp40Q8BWR4 Gm13087-201ENSMUST00000118298 256 ntBASIC6.15□□□□□ -1.42
Usp40Q8BWR4 Gm14753-201ENSMUST00000118503 246 ntBASIC6.15□□□□□ -1.42
Usp40Q8BWR4 Mup-ps17-201ENSMUST00000120723 218 ntBASIC6.15□□□□□ -1.42
Usp40Q8BWR4 2610024D14Rik-201ENSMUST00000121233 294 ntBASIC6.15□□□□□ -1.42
Usp40Q8BWR4 Gm10444-201ENSMUST00000126708 148 ntBASIC6.15□□□□□ -1.42
Usp40Q8BWR4 Gm15860-202ENSMUST00000137257 506 ntTSL 3 BASIC6.15□□□□□ -1.42
Usp40Q8BWR4 Gm13274-202ENSMUST00000137624 271 ntTSL 3 BASIC6.15□□□□□ -1.42
Usp40Q8BWR4 Gm13794-201ENSMUST00000148637 468 ntTSL 3 BASIC6.15□□□□□ -1.42
Usp40Q8BWR4 Gm15767-202ENSMUST00000153786 544 ntTSL 3 BASIC6.15□□□□□ -1.42
Usp40Q8BWR4 1700080G11Rik-201ENSMUST00000156401 436 ntTSL 1 (best) BASIC6.15□□□□□ -1.42
Usp40Q8BWR4 Gm23028-201ENSMUST00000158773 265 ntBASIC6.15□□□□□ -1.42
Usp40Q8BWR4 1700029M03Rik-201ENSMUST00000187300 444 ntTSL 1 (best) BASIC6.15□□□□□ -1.42
Usp40Q8BWR4 Gm29281-201ENSMUST00000188077 381 ntBASIC6.15□□□□□ -1.42
Usp40Q8BWR4 Gm4045-201ENSMUST00000204076 310 ntBASIC6.15□□□□□ -1.42
Usp40Q8BWR4 Gm30717-201ENSMUST00000206549 494 ntTSL 5 BASIC6.15□□□□□ -1.42
Usp40Q8BWR4 Gm17737-201ENSMUST00000210183 1147 ntBASIC6.15□□□□□ -1.42
Usp40Q8BWR4 AC119241.1-201ENSMUST00000223651 534 ntBASIC6.15□□□□□ -1.42
Usp40Q8BWR4 CT009733.1-201ENSMUST00000225322 425 ntBASIC6.15□□□□□ -1.42
Usp40Q8BWR4 Olfr971-201ENSMUST00000075467 924 ntAPPRIS P1 BASIC6.15□□□□□ -1.42
Usp40Q8BWR4 Gm25403-201ENSMUST00000082971 143 ntBASIC6.15□□□□□ -1.42
Usp40Q8BWR4 Gm25818-201ENSMUST00000083282 164 ntBASIC6.15□□□□□ -1.42
Usp40Q8BWR4 Vdac3-ps1-201ENSMUST00000099736 853 ntBASIC6.15□□□□□ -1.42
Usp40Q8BWR4 AC115970.1-201ENSMUST00000218910 1758 ntBASIC6.15□□□□□ -1.43
Usp40Q8BWR4 Rtl4-201ENSMUST00000096301 1758 ntAPPRIS P1 BASIC6.15□□□□□ -1.43
Usp40Q8BWR4 AC158605.2-201ENSMUST00000220287 2726 ntAPPRIS P1 TSL 2 BASIC6.15□□□□□ -1.43
Usp40Q8BWR4 Gm26835-201ENSMUST00000181888 3274 ntTSL 5 BASIC6.15□□□□□ -1.43
Usp40Q8BWR4 Gm44224-201ENSMUST00000204131 1463 ntBASIC6.15□□□□□ -1.43
Usp40Q8BWR4 Gm37124-201ENSMUST00000192140 1992 ntBASIC6.15□□□□□ -1.43
Usp40Q8BWR4 Vmn2r-ps43-201ENSMUST00000173798 2473 ntBASIC6.15□□□□□ -1.43
Usp40Q8BWR4 Gm3665-201ENSMUST00000177214 2461 ntBASIC6.15□□□□□ -1.43
Usp40Q8BWR4 Vmn2r-ps51-201ENSMUST00000177271 2461 ntBASIC6.15□□□□□ -1.43
Usp40Q8BWR4 Gm13340-201ENSMUST00000117219 1545 ntBASIC6.15□□□□□ -1.43
Usp40Q8BWR4 Gm37911-201ENSMUST00000193099 1545 ntBASIC6.15□□□□□ -1.43
Usp40Q8BWR4 Gm43781-201ENSMUST00000197634 2681 ntBASIC6.14□□□□□ -1.43
Usp40Q8BWR4 Gm43613-201ENSMUST00000199409 1613 ntBASIC6.14□□□□□ -1.43
Usp40Q8BWR4 Zbtb20-204ENSMUST00000114694 26901 ntAPPRIS P3 TSL 5 BASIC6.14□□□□□ -1.43
Usp40Q8BWR4 Gm37470-201ENSMUST00000193378 2798 ntBASIC6.14□□□□□ -1.43
Usp40Q8BWR4 Gm43319-201ENSMUST00000198036 2270 ntBASIC6.14□□□□□ -1.43
Usp40Q8BWR4 Cdh10-201ENSMUST00000040562 3407 ntAPPRIS P1 TSL 1 (best) BASIC6.14□□□□□ -1.43
Usp40Q8BWR4 Fign-203ENSMUST00000131615 9734 ntAPPRIS P1 TSL 1 (best) BASIC6.14□□□□□ -1.43
Usp40Q8BWR4 Olfr986-204ENSMUST00000218134 3487 ntAPPRIS P1 TSL 5 BASIC6.14□□□□□ -1.43
Usp40Q8BWR4 Gm34069-201ENSMUST00000214060 2441 ntTSL 5 BASIC6.14□□□□□ -1.43
Usp40Q8BWR4 Mir466n-201ENSMUST00000104798 94 ntBASIC6.14□□□□□ -1.43
Usp40Q8BWR4 Gm12985-201ENSMUST00000118376 183 ntBASIC6.14□□□□□ -1.43
Usp40Q8BWR4 Gm15193-201ENSMUST00000120224 865 ntBASIC6.14□□□□□ -1.43
Usp40Q8BWR4 Gm14916-201ENSMUST00000121904 204 ntBASIC6.14□□□□□ -1.43
Usp40Q8BWR4 Gm11775-201ENSMUST00000136500 773 ntTSL 5 BASIC6.14□□□□□ -1.43
Usp40Q8BWR4 Gm25965-201ENSMUST00000157170 93 ntBASIC6.14□□□□□ -1.43
Usp40Q8BWR4 Gm22601-201ENSMUST00000157595 250 ntBASIC6.14□□□□□ -1.43
Usp40Q8BWR4 Gm8338-201ENSMUST00000163928 363 ntBASIC6.14□□□□□ -1.43
Usp40Q8BWR4 Gm18522-201ENSMUST00000173947 650 ntBASIC6.14□□□□□ -1.43
Usp40Q8BWR4 Gm23977-201ENSMUST00000177871 74 ntBASIC6.14□□□□□ -1.43
Retrieved 100 of 76,532 protein–RNA pairs in 62.6 ms