Protein–RNA interactions for Protein: Q78JW9

Ubfd1, Ubiquitin domain-containing protein UBFD1, mousemouse

Predictions only

Length 368 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ubfd1Q78JW9 Gm24446-201ENSMUST00000083982 156 ntBASIC4.47□□□□□ -1.69
Ubfd1Q78JW9 Vmn1r52-207ENSMUST00000228394 3069 ntAPPRIS P1 BASIC4.47□□□□□ -1.69
Ubfd1Q78JW9 Gm26996-201ENSMUST00000204418 1359 ntBASIC4.47□□□□□ -1.69
Ubfd1Q78JW9 D030025E07Rik-203ENSMUST00000197413 2346 ntTSL 1 (best) BASIC4.47□□□□□ -1.69
Ubfd1Q78JW9 AC154329.1-201ENSMUST00000224408 3129 ntBASIC4.47□□□□□ -1.69
Ubfd1Q78JW9 Olfr535-207ENSMUST00000217235 5186 ntAPPRIS P1 TSL 5 BASIC4.47□□□□□ -1.69
Ubfd1Q78JW9 5930435M05Rik-201ENSMUST00000207572 3712 ntBASIC4.47□□□□□ -1.69
Ubfd1Q78JW9 Zfp715-202ENSMUST00000048015 4333 ntAPPRIS P1 TSL 1 (best) BASIC4.47□□□□□ -1.69
Ubfd1Q78JW9 Olfr884-202ENSMUST00000181088 3185 ntAPPRIS P1 TSL 2 BASIC4.47□□□□□ -1.69
Ubfd1Q78JW9 Vmn1r184-202ENSMUST00000227230 7999 ntAPPRIS P1 BASIC4.46□□□□□ -1.69
Ubfd1Q78JW9 Gm42729-201ENSMUST00000201770 2930 ntBASIC4.46□□□□□ -1.69
Ubfd1Q78JW9 AC155805.1-201ENSMUST00000222419 3808 ntBASIC4.46□□□□□ -1.69
Ubfd1Q78JW9 Ndst4-205ENSMUST00000174648 4996 ntTSL 1 (best) BASIC4.46□□□□□ -1.7
Ubfd1Q78JW9 Vmn1r35-202ENSMUST00000227346 1854 ntBASIC4.46□□□□□ -1.7
Ubfd1Q78JW9 Iglv3-201ENSMUST00000103751 381 ntAPPRIS P1 BASIC4.46□□□□□ -1.7
Ubfd1Q78JW9 Gm25726-201ENSMUST00000104529 129 ntBASIC4.46□□□□□ -1.7
Ubfd1Q78JW9 Gm15113-201ENSMUST00000119280 836 ntBASIC4.46□□□□□ -1.7
Ubfd1Q78JW9 Gm12909-201ENSMUST00000134190 620 ntTSL 2 BASIC4.46□□□□□ -1.7
Ubfd1Q78JW9 Gm25913-201ENSMUST00000157617 135 ntBASIC4.46□□□□□ -1.7
Ubfd1Q78JW9 Gm23499-201ENSMUST00000157736 268 ntBASIC4.46□□□□□ -1.7
Ubfd1Q78JW9 Gm24402-201ENSMUST00000157873 91 ntBASIC4.46□□□□□ -1.7
Ubfd1Q78JW9 Gm23023-201ENSMUST00000158767 109 ntBASIC4.46□□□□□ -1.7
Ubfd1Q78JW9 Hmgb1-ps7-201ENSMUST00000173370 648 ntBASIC4.46□□□□□ -1.7
Ubfd1Q78JW9 Gm20689-201ENSMUST00000176033 279 ntBASIC4.46□□□□□ -1.7
Ubfd1Q78JW9 Esp16-201ENSMUST00000178037 1243 ntAPPRIS P1 TSL 1 (best) BASIC4.46□□□□□ -1.7
Ubfd1Q78JW9 Gm5527-201ENSMUST00000179821 642 ntBASIC4.46□□□□□ -1.7
Ubfd1Q78JW9 Gm37727-201ENSMUST00000191637 819 ntBASIC4.46□□□□□ -1.7
Ubfd1Q78JW9 Gm31123-201ENSMUST00000192094 666 ntBASIC4.46□□□□□ -1.7
Ubfd1Q78JW9 Fbxw15-203ENSMUST00000198397 927 ntAPPRIS ALT2 TSL 1 (best) BASIC4.46□□□□□ -1.7
Ubfd1Q78JW9 Gm7946-201ENSMUST00000203326 958 ntBASIC4.46□□□□□ -1.7
Ubfd1Q78JW9 Spcs2-202ENSMUST00000207063 727 ntTSL 2 BASIC4.46□□□□□ -1.7
Ubfd1Q78JW9 Gm45392-201ENSMUST00000210441 214 ntBASIC4.46□□□□□ -1.7
Ubfd1Q78JW9 5330439M10Rik-201ENSMUST00000218667 348 ntTSL 1 (best) BASIC4.46□□□□□ -1.7
Ubfd1Q78JW9 AC112972.1-201ENSMUST00000227329 365 ntBASIC4.46□□□□□ -1.7
Ubfd1Q78JW9 AC129208.2-201ENSMUST00000228506 320 ntBASIC4.46□□□□□ -1.7
Ubfd1Q78JW9 Olfr16-201ENSMUST00000038432 1050 ntAPPRIS P1 BASIC4.46□□□□□ -1.7
Ubfd1Q78JW9 Cypt3-201ENSMUST00000056754 666 ntAPPRIS P3 TSL 1 (best) BASIC4.46□□□□□ -1.7
Ubfd1Q78JW9 Olfr807-201ENSMUST00000059038 997 ntAPPRIS P1 BASIC4.46□□□□□ -1.7
Ubfd1Q78JW9 Olfr476-201ENSMUST00000077249 933 ntAPPRIS P1 BASIC4.46□□□□□ -1.7
Ubfd1Q78JW9 4930524N10Rik-201ENSMUST00000082357 919 ntAPPRIS P1 TSL 1 (best) BASIC4.46□□□□□ -1.7
Ubfd1Q78JW9 Gm23939-201ENSMUST00000082880 133 ntBASIC4.46□□□□□ -1.7
Ubfd1Q78JW9 Gm23464-201ENSMUST00000083145 147 ntBASIC4.46□□□□□ -1.7
Ubfd1Q78JW9 Gm25126-201ENSMUST00000083343 102 ntBASIC4.46□□□□□ -1.7
Ubfd1Q78JW9 Olfr1100-201ENSMUST00000094913 969 ntAPPRIS P1 BASIC4.46□□□□□ -1.7
Ubfd1Q78JW9 Olfr52-201ENSMUST00000099905 960 ntAPPRIS P1 BASIC4.46□□□□□ -1.7
Ubfd1Q78JW9 AC133076.2-201ENSMUST00000227678 3532 ntBASIC4.46□□□□□ -1.7
Ubfd1Q78JW9 Cep290-201ENSMUST00000164751 8006 ntAPPRIS P1 TSL 5 BASIC4.46□□□□□ -1.7
Ubfd1Q78JW9 Xirp2-202ENSMUST00000112347 11979 ntTSL 1 (best) BASIC4.46□□□□□ -1.7
Ubfd1Q78JW9 Olfr788-202ENSMUST00000213222 4747 ntAPPRIS P1 TSL 5 BASIC4.46□□□□□ -1.7
Ubfd1Q78JW9 Scn7a-201ENSMUST00000042792 7338 ntAPPRIS P1 TSL 1 (best) BASIC4.46□□□□□ -1.7
Ubfd1Q78JW9 Olfr1353-203ENSMUST00000205193 1924 ntAPPRIS P1 TSL 5 BASIC4.46□□□□□ -1.7
Ubfd1Q78JW9 Olfr812-203ENSMUST00000205013 1718 ntAPPRIS P1 TSL 5 BASIC4.46□□□□□ -1.7
Ubfd1Q78JW9 Serpina6-201ENSMUST00000044159 1605 ntAPPRIS P1 TSL 1 (best) BASIC4.46□□□□□ -1.7
Ubfd1Q78JW9 Msr1-202ENSMUST00000170091 3636 ntTSL 1 (best) BASIC4.46□□□□□ -1.7
Ubfd1Q78JW9 AC122357.2-201ENSMUST00000220732 1525 ntBASIC4.46□□□□□ -1.7
Ubfd1Q78JW9 Gm9972-201ENSMUST00000069051 1533 ntAPPRIS P1 BASIC4.46□□□□□ -1.7
Ubfd1Q78JW9 Wac-217ENSMUST00000172018 1965 ntTSL 5 BASIC4.45□□□□□ -1.7
Ubfd1Q78JW9 Fcrl5-201ENSMUST00000049926 1791 ntAPPRIS P4 TSL 5 BASIC4.45□□□□□ -1.7
Ubfd1Q78JW9 Vmn1r14-203ENSMUST00000227574 7394 ntAPPRIS ALT2 BASIC4.45□□□□□ -1.7
Ubfd1Q78JW9 Gm28940-201ENSMUST00000187929 1682 ntTSL 1 (best) BASIC4.45□□□□□ -1.7
Ubfd1Q78JW9 Olfr622-202ENSMUST00000213536 2219 ntAPPRIS P1 TSL 5 BASIC4.45□□□□□ -1.7
Ubfd1Q78JW9 Olfr799-205ENSMUST00000217364 1580 ntAPPRIS P1 TSL 5 BASIC4.45□□□□□ -1.7
Ubfd1Q78JW9 Hdx-202ENSMUST00000113422 9534 ntAPPRIS P1 TSL 1 (best) BASIC4.45□□□□□ -1.7
Ubfd1Q78JW9 Olfr685-204ENSMUST00000217432 3246 ntAPPRIS ALT2 TSL 5 BASIC4.45□□□□□ -1.7
Ubfd1Q78JW9 Igf1-202ENSMUST00000095360 7052 ntAPPRIS P1 TSL 1 (best) BASIC4.45□□□□□ -1.7
Ubfd1Q78JW9 Eda2r-201ENSMUST00000037353 4752 ntAPPRIS P1 TSL 1 (best) BASIC4.45□□□□□ -1.7
Ubfd1Q78JW9 Zfp972-203ENSMUST00000108986 192 ntTSL 5 BASIC4.45□□□□□ -1.7
Ubfd1Q78JW9 Gm11110-201ENSMUST00000112915 1013 ntAPPRIS P1 TSL 5 BASIC4.45□□□□□ -1.7
Ubfd1Q78JW9 Gm12814-201ENSMUST00000117091 846 ntBASIC4.45□□□□□ -1.7
Ubfd1Q78JW9 Gm12062-201ENSMUST00000117533 259 ntBASIC4.45□□□□□ -1.7
Ubfd1Q78JW9 Gm15176-201ENSMUST00000117734 135 ntBASIC4.45□□□□□ -1.7
Ubfd1Q78JW9 Gm11878-201ENSMUST00000117908 400 ntBASIC4.45□□□□□ -1.7
Ubfd1Q78JW9 Gm14067-201ENSMUST00000119340 314 ntBASIC4.45□□□□□ -1.7
Ubfd1Q78JW9 Vmn2r-ps2-201ENSMUST00000121053 765 ntBASIC4.45□□□□□ -1.7
Ubfd1Q78JW9 Gm14697-201ENSMUST00000147144 648 ntTSL 1 (best) BASIC4.45□□□□□ -1.7
Ubfd1Q78JW9 Gm26347-201ENSMUST00000157526 131 ntBASIC4.45□□□□□ -1.7
Ubfd1Q78JW9 Gm23352-201ENSMUST00000158428 64 ntBASIC4.45□□□□□ -1.7
Ubfd1Q78JW9 Gm15689-201ENSMUST00000160604 1159 ntTSL 1 (best) BASIC4.45□□□□□ -1.7
Ubfd1Q78JW9 Gm17421-201ENSMUST00000167845 674 ntBASIC4.45□□□□□ -1.7
Ubfd1Q78JW9 Gm17133-201ENSMUST00000170636 289 ntTSL 3 BASIC4.45□□□□□ -1.7
Ubfd1Q78JW9 Gm11007-201ENSMUST00000177700 195 ntTSL 1 (best) BASIC4.45□□□□□ -1.7
Ubfd1Q78JW9 Gm2007-201ENSMUST00000177981 195 ntTSL 5 BASIC4.45□□□□□ -1.7
Ubfd1Q78JW9 Cldn34c3-201ENSMUST00000178148 702 ntAPPRIS P1 TSL 5 BASIC4.45□□□□□ -1.7
Ubfd1Q78JW9 Cldn34c2-201ENSMUST00000178457 702 ntAPPRIS P1 TSL 5 BASIC4.45□□□□□ -1.7
Ubfd1Q78JW9 Gm2004-203ENSMUST00000179349 195 ntTSL 1 (best) BASIC4.45□□□□□ -1.7
Ubfd1Q78JW9 Mir669a-7-201ENSMUST00000180364 87 ntBASIC4.45□□□□□ -1.7
Ubfd1Q78JW9 Gm27883-201ENSMUST00000183941 102 ntBASIC4.45□□□□□ -1.7
Ubfd1Q78JW9 Mir6391-201ENSMUST00000184391 104 ntBASIC4.45□□□□□ -1.7
Ubfd1Q78JW9 Gm28597-201ENSMUST00000187664 666 ntBASIC4.45□□□□□ -1.7
Ubfd1Q78JW9 Gm28625-201ENSMUST00000188309 205 ntBASIC4.45□□□□□ -1.7
Ubfd1Q78JW9 Faiml-202ENSMUST00000188555 560 ntAPPRIS P1 TSL 5 BASIC4.45□□□□□ -1.7
Ubfd1Q78JW9 Gm38008-201ENSMUST00000195333 518 ntBASIC4.45□□□□□ -1.7
Ubfd1Q78JW9 Mir669a-6-201ENSMUST00000196127 87 ntBASIC4.45□□□□□ -1.7
Ubfd1Q78JW9 Gm42465-201ENSMUST00000197036 492 ntBASIC4.45□□□□□ -1.7
Ubfd1Q78JW9 Mir669a-12-201ENSMUST00000197274 87 ntBASIC4.45□□□□□ -1.7
Ubfd1Q78JW9 Mir669a-5-201ENSMUST00000197439 87 ntBASIC4.45□□□□□ -1.7
Ubfd1Q78JW9 Mir669a-10-201ENSMUST00000197745 87 ntBASIC4.45□□□□□ -1.7
Ubfd1Q78JW9 Mir669a-11-201ENSMUST00000197952 87 ntBASIC4.45□□□□□ -1.7
Ubfd1Q78JW9 Mir669a-4-201ENSMUST00000198665 87 ntBASIC4.45□□□□□ -1.7
Ubfd1Q78JW9 Gm43825-201ENSMUST00000199650 734 ntBASIC4.45□□□□□ -1.7
Retrieved 100 of 76,532 protein–RNA pairs in 62.4 ms