Protein–RNA interactions for Protein: Q6PFF0

Scaf4, SR-related CTD-associated factor 4, mousemouse

Known RBP Predictions only

Length 1,209 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scaf4Q6PFF0 AL672194.1-201ENSMUST00000224841 603 ntBASIC5.04□□□□□ -1.6
Scaf4Q6PFF0 AC160980.2-201ENSMUST00000225131 949 ntBASIC5.04□□□□□ -1.6
Scaf4Q6PFF0 AC166369.1-201ENSMUST00000228126 351 ntBASIC5.04□□□□□ -1.6
Scaf4Q6PFF0 Gm22572-201ENSMUST00000082985 105 ntBASIC5.04□□□□□ -1.6
Scaf4Q6PFF0 Gm4017-201ENSMUST00000084813 338 ntBASIC5.04□□□□□ -1.6
Scaf4Q6PFF0 Gm37488-201ENSMUST00000195434 3374 ntBASIC5.04□□□□□ -1.6
Scaf4Q6PFF0 Olfr516-202ENSMUST00000216092 1493 ntAPPRIS P1 TSL 5 BASIC5.04□□□□□ -1.6
Scaf4Q6PFF0 Rgs21-202ENSMUST00000184189 1674 ntAPPRIS P1 TSL 5 BASIC5.04□□□□□ -1.6
Scaf4Q6PFF0 Ktn1-219ENSMUST00000190182 3984 ntAPPRIS ALT2 TSL 5 BASIC5.04□□□□□ -1.6
Scaf4Q6PFF0 Gm26767-201ENSMUST00000180936 4476 ntTSL 5 BASIC5.04□□□□□ -1.6
Scaf4Q6PFF0 Gm40020-201ENSMUST00000215677 1635 ntBASIC5.04□□□□□ -1.6
Scaf4Q6PFF0 Gm38590-202ENSMUST00000210654 1803 ntTSL 5 BASIC5.04□□□□□ -1.6
Scaf4Q6PFF0 Vmn1r81-204ENSMUST00000228482 13495 ntAPPRIS ALT2 BASIC5.04□□□□□ -1.6
Scaf4Q6PFF0 Gm29293-201ENSMUST00000189416 2188 ntBASIC5.04□□□□□ -1.6
Scaf4Q6PFF0 Dmxl2-202ENSMUST00000118600 9465 ntAPPRIS ALT2 TSL 5 BASIC5.04□□□□□ -1.6
Scaf4Q6PFF0 Ankar-202ENSMUST00000211837 4543 ntAPPRIS ALT2 TSL 1 (best) BASIC5.04□□□□□ -1.6
Scaf4Q6PFF0 Gm21244-202ENSMUST00000189201 3115 ntAPPRIS P1 TSL 5 BASIC5.03□□□□□ -1.6
Scaf4Q6PFF0 Mtm1-213ENSMUST00000171933 3488 ntAPPRIS P1 TSL 1 (best) BASIC5.03□□□□□ -1.6
Scaf4Q6PFF0 Dock11-202ENSMUST00000115264 1725 ntTSL 5 BASIC5.03□□□□□ -1.6
Scaf4Q6PFF0 Gm45222-201ENSMUST00000207029 4307 ntBASIC5.03□□□□□ -1.6
Scaf4Q6PFF0 Olfr1279-203ENSMUST00000216697 3385 ntAPPRIS ALT1 TSL 5 BASIC5.03□□□□□ -1.6
Scaf4Q6PFF0 B230206I08Rik-201ENSMUST00000207479 3191 ntBASIC5.03□□□□□ -1.6
Scaf4Q6PFF0 Olfr1195-202ENSMUST00000213545 2585 ntAPPRIS P1 TSL 5 BASIC5.03□□□□□ -1.6
Scaf4Q6PFF0 Gm23691-201ENSMUST00000101878 107 ntBASIC5.03□□□□□ -1.6
Scaf4Q6PFF0 Gm24350-201ENSMUST00000104163 133 ntBASIC5.03□□□□□ -1.6
Scaf4Q6PFF0 Gm22021-201ENSMUST00000104353 107 ntBASIC5.03□□□□□ -1.6
Scaf4Q6PFF0 Gnrh1-201ENSMUST00000111095 486 ntAPPRIS P1 TSL 1 (best) BASIC5.03□□□□□ -1.6
Scaf4Q6PFF0 Gm13085-201ENSMUST00000118356 171 ntBASIC5.03□□□□□ -1.6
Scaf4Q6PFF0 Gm11737-201ENSMUST00000118713 468 ntBASIC5.03□□□□□ -1.6
Scaf4Q6PFF0 Gm14761-201ENSMUST00000121363 262 ntBASIC5.03□□□□□ -1.6
Scaf4Q6PFF0 Gtsf1-202ENSMUST00000123724 747 ntTSL 5 BASIC5.03□□□□□ -1.6
Scaf4Q6PFF0 Gm22596-201ENSMUST00000157601 316 ntBASIC5.03□□□□□ -1.6
Scaf4Q6PFF0 Gm22336-201ENSMUST00000157719 107 ntBASIC5.03□□□□□ -1.6
Scaf4Q6PFF0 Gm25334-201ENSMUST00000158036 110 ntBASIC5.03□□□□□ -1.6
Scaf4Q6PFF0 Gm23224-201ENSMUST00000158122 271 ntBASIC5.03□□□□□ -1.6
Scaf4Q6PFF0 Gm17081-201ENSMUST00000167363 478 ntBASIC5.03□□□□□ -1.6
Scaf4Q6PFF0 Gm10717-208ENSMUST00000179839 681 ntTSL 5 BASIC5.03□□□□□ -1.6
Scaf4Q6PFF0 Gm10717-209ENSMUST00000179982 681 ntTSL 5 BASIC5.03□□□□□ -1.6
Scaf4Q6PFF0 4930461G14Rik-201ENSMUST00000181967 843 ntTSL 1 (best) BASIC5.03□□□□□ -1.6
Scaf4Q6PFF0 Gm6693-201ENSMUST00000189583 813 ntBASIC5.03□□□□□ -1.6
Scaf4Q6PFF0 Gm8325-202ENSMUST00000193411 182 ntTSL 1 (best) BASIC5.03□□□□□ -1.6
Scaf4Q6PFF0 Gm38167-201ENSMUST00000195704 1178 ntBASIC5.03□□□□□ -1.6
Scaf4Q6PFF0 Gm43043-201ENSMUST00000196579 412 ntBASIC5.03□□□□□ -1.6
Scaf4Q6PFF0 Ranbp2-ps11-201ENSMUST00000197185 387 ntBASIC5.03□□□□□ -1.6
Scaf4Q6PFF0 Gm43083-201ENSMUST00000199594 476 ntBASIC5.03□□□□□ -1.6
Scaf4Q6PFF0 Igkv11-114-201ENSMUST00000200013 346 ntBASIC5.03□□□□□ -1.6
Scaf4Q6PFF0 Vmn1r-ps13-201ENSMUST00000204697 134 ntBASIC5.03□□□□□ -1.6
Scaf4Q6PFF0 Gm16351-202ENSMUST00000209660 337 ntTSL 5 BASIC5.03□□□□□ -1.6
Scaf4Q6PFF0 Gm18258-201ENSMUST00000210413 542 ntBASIC5.03□□□□□ -1.6
Scaf4Q6PFF0 Gm45249-201ENSMUST00000211021 348 ntBASIC5.03□□□□□ -1.6
Scaf4Q6PFF0 Fkbp1b-202ENSMUST00000219880 246 ntTSL 1 (best) BASIC5.03□□□□□ -1.6
Scaf4Q6PFF0 AC154271.1-201ENSMUST00000224780 383 ntBASIC5.03□□□□□ -1.6
Scaf4Q6PFF0 Olfr830-201ENSMUST00000078861 948 ntAPPRIS P2 BASIC5.03□□□□□ -1.6
Scaf4Q6PFF0 Gm26206-201ENSMUST00000082908 110 ntBASIC5.03□□□□□ -1.6
Scaf4Q6PFF0 Gm10717-204ENSMUST00000099056 669 ntTSL 5 BASIC5.03□□□□□ -1.6
Scaf4Q6PFF0 Gm14391-203ENSMUST00000109056 1956 ntTSL 3 BASIC5.03□□□□□ -1.6
Scaf4Q6PFF0 Tfec-201ENSMUST00000031533 1787 ntAPPRIS P1 TSL 1 (best) BASIC5.03□□□□□ -1.6
Scaf4Q6PFF0 Gm37509-201ENSMUST00000194867 3169 ntBASIC5.03□□□□□ -1.6
Scaf4Q6PFF0 Slc5a12-201ENSMUST00000045972 3529 ntTSL 1 (best) BASIC5.03□□□□□ -1.6
Scaf4Q6PFF0 Olfr391-ps-201ENSMUST00000214485 2080 ntAPPRIS P1 TSL 2 BASIC5.03□□□□□ -1.6
Scaf4Q6PFF0 Mdn1-201ENSMUST00000071642 17970 ntAPPRIS ALT2 TSL 5 BASIC5.03□□□□□ -1.6
Scaf4Q6PFF0 A730004F24Rik-202ENSMUST00000195454 1704 ntTSL 1 (best) BASIC5.03□□□□□ -1.6
Scaf4Q6PFF0 Gm37226-201ENSMUST00000191644 3255 ntBASIC5.03□□□□□ -1.6
Scaf4Q6PFF0 Gm29968-201ENSMUST00000222815 1387 ntTSL 1 (best) BASIC5.03□□□□□ -1.6
Scaf4Q6PFF0 Prame-201ENSMUST00000033786 1395 ntAPPRIS P1 TSL 5 BASIC5.03□□□□□ -1.6
Scaf4Q6PFF0 Gm43281-201ENSMUST00000202522 2704 ntBASIC5.03□□□□□ -1.6
Scaf4Q6PFF0 Vmn2r1-201ENSMUST00000029406 2739 ntAPPRIS P1 TSL 1 (best) BASIC5.03□□□□□ -1.6
Scaf4Q6PFF0 Cbx5-202ENSMUST00000118152 8803 ntAPPRIS P1 TSL 1 (best) BASIC5.02□□□□□ -1.61
Scaf4Q6PFF0 Olfr113-201ENSMUST00000216181 1671 ntAPPRIS P1 TSL 5 BASIC5.02□□□□□ -1.61
Scaf4Q6PFF0 Gm45555-201ENSMUST00000210028 2602 ntBASIC5.02□□□□□ -1.61
Scaf4Q6PFF0 Pax6os1-202ENSMUST00000149133 1464 ntTSL 1 (best) BASIC5.02□□□□□ -1.61
Scaf4Q6PFF0 Fbxw16-201ENSMUST00000084984 1497 ntAPPRIS P1 TSL 1 (best) BASIC5.02□□□□□ -1.61
Scaf4Q6PFF0 Olfr364-ps1-201ENSMUST00000104995 1766 ntAPPRIS P1 TSL 5 BASIC5.02□□□□□ -1.61
Scaf4Q6PFF0 Meis1-206ENSMUST00000144988 7553 ntTSL 2 BASIC5.02□□□□□ -1.61
Scaf4Q6PFF0 Uhmk1-203ENSMUST00000150821 7676 ntTSL 1 (best) BASIC5.02□□□□□ -1.61
Scaf4Q6PFF0 Pramel3-202ENSMUST00000118821 3698 ntAPPRIS ALT2 TSL 1 (best) BASIC5.02□□□□□ -1.61
Scaf4Q6PFF0 Gm14163-201ENSMUST00000117342 217 ntBASIC5.02□□□□□ -1.61
Scaf4Q6PFF0 Rpl38-ps2-201ENSMUST00000117356 213 ntBASIC5.02□□□□□ -1.61
Scaf4Q6PFF0 Gm8129-201ENSMUST00000118230 213 ntBASIC5.02□□□□□ -1.61
Scaf4Q6PFF0 Gm13082-201ENSMUST00000118877 561 ntBASIC5.02□□□□□ -1.61
Scaf4Q6PFF0 Gm12482-201ENSMUST00000120435 630 ntBASIC5.02□□□□□ -1.61
Scaf4Q6PFF0 Gm14269-201ENSMUST00000120455 306 ntBASIC5.02□□□□□ -1.61
Scaf4Q6PFF0 Gm12422-201ENSMUST00000121431 302 ntBASIC5.02□□□□□ -1.61
Scaf4Q6PFF0 Gm15167-201ENSMUST00000121997 187 ntBASIC5.02□□□□□ -1.61
Scaf4Q6PFF0 Gm25325-201ENSMUST00000122559 86 ntBASIC5.02□□□□□ -1.61
Scaf4Q6PFF0 Ftx-201ENSMUST00000123841 673 ntTSL 1 (best) BASIC5.02□□□□□ -1.61
Scaf4Q6PFF0 Gm15700-201ENSMUST00000139791 821 ntTSL 3 BASIC5.02□□□□□ -1.61
Scaf4Q6PFF0 Gm12762-201ENSMUST00000140881 483 ntTSL 2 BASIC5.02□□□□□ -1.61
Scaf4Q6PFF0 Gm11861-201ENSMUST00000141571 382 ntTSL 3 BASIC5.02□□□□□ -1.61
Scaf4Q6PFF0 Gm24343-201ENSMUST00000158708 111 ntBASIC5.02□□□□□ -1.61
Scaf4Q6PFF0 Rps8-ps1-201ENSMUST00000172445 624 ntBASIC5.02□□□□□ -1.61
Scaf4Q6PFF0 4930518C09Rik-201ENSMUST00000172700 478 ntTSL 1 (best) BASIC5.02□□□□□ -1.61
Scaf4Q6PFF0 Gm22857-201ENSMUST00000174969 134 ntBASIC5.02□□□□□ -1.61
Scaf4Q6PFF0 Gm8247-202ENSMUST00000178759 375 ntAPPRIS ALT2 TSL 5 BASIC5.02□□□□□ -1.61
Scaf4Q6PFF0 Gm8816-201ENSMUST00000182280 1163 ntBASIC5.02□□□□□ -1.61
Scaf4Q6PFF0 Gm27234-201ENSMUST00000183362 581 ntTSL 5 BASIC5.02□□□□□ -1.61
Scaf4Q6PFF0 Gm27887-201ENSMUST00000184367 102 ntBASIC5.02□□□□□ -1.61
Scaf4Q6PFF0 Gm3428-202ENSMUST00000184555 416 ntTSL 5 BASIC5.02□□□□□ -1.61
Scaf4Q6PFF0 9830004L10Rik-202ENSMUST00000188074 687 ntTSL 5 BASIC5.02□□□□□ -1.61
Scaf4Q6PFF0 Gm34768-201ENSMUST00000193884 565 ntBASIC5.02□□□□□ -1.61
Retrieved 100 of 76,532 protein–RNA pairs in 92.9 ms