Protein–RNA interactions for Protein: Q6PDX6

Rnf220, E3 ubiquitin-protein ligase Rnf220, mousemouse

Predictions only

Length 566 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf220Q6PDX6 Primpol-201ENSMUST00000040468 3772 ntAPPRIS P1 TSL 1 (best) BASIC4.7□□□□□ -1.66
Rnf220Q6PDX6 Dmd-201ENSMUST00000113991 4438 ntTSL 1 (best) BASIC4.7□□□□□ -1.66
Rnf220Q6PDX6 Olfr905-202ENSMUST00000214377 4429 ntAPPRIS P1 TSL 5 BASIC4.7□□□□□ -1.66
Rnf220Q6PDX6 D7Ertd443e-202ENSMUST00000106129 1306 ntAPPRIS ALT2 TSL 1 (best) BASIC4.7□□□□□ -1.66
Rnf220Q6PDX6 Gm17916-201ENSMUST00000186137 1342 ntTSL 1 (best) BASIC4.7□□□□□ -1.66
Rnf220Q6PDX6 Trappc13-205ENSMUST00000144060 3538 ntAPPRIS ALT1 TSL 1 (best) BASIC4.69□□□□□ -1.66
Rnf220Q6PDX6 Gpr141-201ENSMUST00000065335 3433 ntAPPRIS P1 TSL 1 (best) BASIC4.69□□□□□ -1.66
Rnf220Q6PDX6 Cdr1-201ENSMUST00000166381 2313 ntAPPRIS P1 BASIC4.69□□□□□ -1.66
Rnf220Q6PDX6 Gm5925-201ENSMUST00000105016 1497 ntBASIC4.69□□□□□ -1.66
Rnf220Q6PDX6 Fbxw24-201ENSMUST00000073962 1488 ntAPPRIS P1 TSL 1 (best) BASIC4.69□□□□□ -1.66
Rnf220Q6PDX6 Olfr1185-ps1-201ENSMUST00000075025 3344 ntAPPRIS P1 TSL 5 BASIC4.69□□□□□ -1.66
Rnf220Q6PDX6 Gm4211-201ENSMUST00000181103 2220 ntTSL 1 (best) BASIC4.69□□□□□ -1.66
Rnf220Q6PDX6 4933423P22Rik-201ENSMUST00000126219 4595 ntTSL 1 (best) BASIC4.69□□□□□ -1.66
Rnf220Q6PDX6 Prune2-201ENSMUST00000087689 12512 ntAPPRIS P1 TSL 5 BASIC4.69□□□□□ -1.66
Rnf220Q6PDX6 Sycp2-201ENSMUST00000081134 5717 ntAPPRIS P1 TSL 1 (best) BASIC4.69□□□□□ -1.66
Rnf220Q6PDX6 Gm22374-201ENSMUST00000104583 132 ntBASIC4.69□□□□□ -1.66
Rnf220Q6PDX6 C87499-202ENSMUST00000107142 672 ntAPPRIS ALT2 TSL 2 BASIC4.69□□□□□ -1.66
Rnf220Q6PDX6 Fam107b-205ENSMUST00000115055 515 ntAPPRIS P1 TSL 2 BASIC4.69□□□□□ -1.66
Rnf220Q6PDX6 Mir669d-2-201ENSMUST00000116854 86 ntBASIC4.69□□□□□ -1.66
Rnf220Q6PDX6 Gm13491-201ENSMUST00000118267 235 ntBASIC4.69□□□□□ -1.66
Rnf220Q6PDX6 Gm12852-201ENSMUST00000119478 719 ntBASIC4.69□□□□□ -1.66
Rnf220Q6PDX6 Gm9225-201ENSMUST00000121921 836 ntBASIC4.69□□□□□ -1.66
Rnf220Q6PDX6 n-R5s98-201ENSMUST00000122549 119 ntBASIC4.69□□□□□ -1.66
Rnf220Q6PDX6 Gm14343-201ENSMUST00000154524 731 ntTSL 3 BASIC4.69□□□□□ -1.66
Rnf220Q6PDX6 Sox5os4-201ENSMUST00000155562 365 ntTSL 3 BASIC4.69□□□□□ -1.66
Rnf220Q6PDX6 Gm26373-201ENSMUST00000157833 103 ntBASIC4.69□□□□□ -1.66
Rnf220Q6PDX6 Gm17538-201ENSMUST00000168236 327 ntBASIC4.69□□□□□ -1.66
Rnf220Q6PDX6 Vmn1r-ps66-201ENSMUST00000173436 612 ntBASIC4.69□□□□□ -1.66
Rnf220Q6PDX6 Gm5849-201ENSMUST00000180151 351 ntAPPRIS P1 TSL 3 BASIC4.69□□□□□ -1.66
Rnf220Q6PDX6 Gm27460-201ENSMUST00000184213 100 ntBASIC4.69□□□□□ -1.66
Rnf220Q6PDX6 Gm5116-201ENSMUST00000187732 463 ntBASIC4.69□□□□□ -1.66
Rnf220Q6PDX6 Gm29627-201ENSMUST00000187984 463 ntBASIC4.69□□□□□ -1.66
Rnf220Q6PDX6 Scgb2b16-ps-201ENSMUST00000188720 333 ntBASIC4.69□□□□□ -1.66
Rnf220Q6PDX6 Gm21256-202ENSMUST00000188881 932 ntAPPRIS P1 TSL 1 (best) BASIC4.69□□□□□ -1.66
Rnf220Q6PDX6 Gm29276-201ENSMUST00000190453 932 ntAPPRIS P1 TSL 1 (best) BASIC4.69□□□□□ -1.66
Rnf220Q6PDX6 Gm20871-201ENSMUST00000191322 931 ntBASIC4.69□□□□□ -1.66
Rnf220Q6PDX6 Gm38044-201ENSMUST00000192964 487 ntBASIC4.69□□□□□ -1.66
Rnf220Q6PDX6 Smr2-203ENSMUST00000196477 676 ntAPPRIS ALT2 TSL 1 (best) BASIC4.69□□□□□ -1.66
Rnf220Q6PDX6 Csn1s2a-203ENSMUST00000196749 917 ntAPPRIS ALT2 TSL 1 (best) BASIC4.69□□□□□ -1.66
Rnf220Q6PDX6 Gm8041-201ENSMUST00000199755 616 ntBASIC4.69□□□□□ -1.66
Rnf220Q6PDX6 Mir219c-201ENSMUST00000199860 60 ntBASIC4.69□□□□□ -1.66
Rnf220Q6PDX6 Gm42604-201ENSMUST00000200077 801 ntTSL 3 BASIC4.69□□□□□ -1.66
Rnf220Q6PDX6 Gm38832-201ENSMUST00000205674 400 ntTSL 1 (best) BASIC4.69□□□□□ -1.66
Rnf220Q6PDX6 Olfr556-202ENSMUST00000213485 3825 ntAPPRIS P1 TSL 5 BASIC4.69□□□□□ -1.66
Rnf220Q6PDX6 Gm32171-201ENSMUST00000217419 1043 ntTSL 5 BASIC4.69□□□□□ -1.66
Rnf220Q6PDX6 AC152979.1-201ENSMUST00000218214 289 ntBASIC4.69□□□□□ -1.66
Rnf220Q6PDX6 AC121788.1-201ENSMUST00000218514 1046 ntTSL 5 BASIC4.69□□□□□ -1.66
Rnf220Q6PDX6 AC156559.2-201ENSMUST00000224403 384 ntBASIC4.69□□□□□ -1.66
Rnf220Q6PDX6 AC158392.2-201ENSMUST00000225402 969 ntBASIC4.69□□□□□ -1.66
Rnf220Q6PDX6 CT010506.2-201ENSMUST00000225618 183 ntBASIC4.69□□□□□ -1.66
Rnf220Q6PDX6 AC122397.2-201ENSMUST00000227422 686 ntBASIC4.69□□□□□ -1.66
Rnf220Q6PDX6 Olfr138-201ENSMUST00000071871 939 ntAPPRIS P1 BASIC4.69□□□□□ -1.66
Rnf220Q6PDX6 Csn1s2a-201ENSMUST00000076379 920 ntAPPRIS P3 TSL 1 (best) BASIC4.69□□□□□ -1.66
Rnf220Q6PDX6 Olfr857-201ENSMUST00000077023 930 ntAPPRIS P1 BASIC4.69□□□□□ -1.66
Rnf220Q6PDX6 Snord38a-201ENSMUST00000083746 71 ntBASIC4.69□□□□□ -1.66
Rnf220Q6PDX6 Smr2-201ENSMUST00000087043 676 ntAPPRIS P3 TSL 1 (best) BASIC4.69□□□□□ -1.66
Rnf220Q6PDX6 Olfr689-201ENSMUST00000098153 1076 ntAPPRIS P1 BASIC4.69□□□□□ -1.66
Rnf220Q6PDX6 Gm45223-201ENSMUST00000207037 5138 ntBASIC4.69□□□□□ -1.66
Rnf220Q6PDX6 Uty-204ENSMUST00000139365 4684 ntAPPRIS ALT2 TSL 1 (best) BASIC4.69□□□□□ -1.66
Rnf220Q6PDX6 Gm9923-201ENSMUST00000217785 1836 ntBASIC4.69□□□□□ -1.66
Rnf220Q6PDX6 Gm2824-202ENSMUST00000180955 3522 ntTSL 1 (best) BASIC4.69□□□□□ -1.66
Rnf220Q6PDX6 4930503L19Rik-204ENSMUST00000212155 1585 ntAPPRIS ALT2 TSL 1 (best) BASIC4.69□□□□□ -1.66
Rnf220Q6PDX6 Sucnr1-201ENSMUST00000029326 1571 ntAPPRIS P1 TSL 1 (best) BASIC4.69□□□□□ -1.66
Rnf220Q6PDX6 Rev3l-207ENSMUST00000164763 10399 ntAPPRIS P1 TSL 5 BASIC4.69□□□□□ -1.66
Rnf220Q6PDX6 Sema3a-201ENSMUST00000030714 5930 ntAPPRIS P1 TSL 1 (best) BASIC4.69□□□□□ -1.66
Rnf220Q6PDX6 Gm38010-201ENSMUST00000192592 2784 ntBASIC4.69□□□□□ -1.66
Rnf220Q6PDX6 Vmn1r200-204ENSMUST00000227326 5449 ntAPPRIS ALT2 BASIC4.69□□□□□ -1.66
Rnf220Q6PDX6 Olfr330-202ENSMUST00000213188 2836 ntAPPRIS P1 TSL 2 BASIC4.68□□□□□ -1.66
Rnf220Q6PDX6 Gm37412-201ENSMUST00000194866 4321 ntBASIC4.68□□□□□ -1.66
Rnf220Q6PDX6 Cd84-205ENSMUST00000155802 3291 ntAPPRIS P3 TSL 1 (best) BASIC4.68□□□□□ -1.66
Rnf220Q6PDX6 Gm17131-201ENSMUST00000164420 3846 ntBASIC4.68□□□□□ -1.66
Rnf220Q6PDX6 Olfr91-202ENSMUST00000216376 3832 ntAPPRIS P1 TSL 5 BASIC4.68□□□□□ -1.66
Rnf220Q6PDX6 Olfr622-202ENSMUST00000213536 2219 ntAPPRIS P1 TSL 5 BASIC4.68□□□□□ -1.66
Rnf220Q6PDX6 Olfr205-202ENSMUST00000213910 1650 ntAPPRIS P1 TSL 5 BASIC4.68□□□□□ -1.66
Rnf220Q6PDX6 Olfr920-201ENSMUST00000074740 5711 ntAPPRIS P1 TSL 1 (best) BASIC4.68□□□□□ -1.66
Rnf220Q6PDX6 Gm20287-201ENSMUST00000172848 2367 ntBASIC4.68□□□□□ -1.66
Rnf220Q6PDX6 Gm13089-201ENSMUST00000073532 1807 ntAPPRIS P1 TSL 1 (best) BASIC4.68□□□□□ -1.66
Rnf220Q6PDX6 Vmn1r167-202ENSMUST00000227713 2677 ntAPPRIS P1 BASIC4.68□□□□□ -1.66
Rnf220Q6PDX6 5330434G04Rik-202ENSMUST00000136406 3545 ntTSL 1 (best) BASIC4.68□□□□□ -1.66
Rnf220Q6PDX6 Olfr1467-202ENSMUST00000215096 3671 ntAPPRIS P1 TSL 5 BASIC4.68□□□□□ -1.66
Rnf220Q6PDX6 Gm24951-201ENSMUST00000102182 109 ntBASIC4.68□□□□□ -1.66
Rnf220Q6PDX6 Gm12261-201ENSMUST00000117499 645 ntBASIC4.68□□□□□ -1.66
Rnf220Q6PDX6 Gm13804-201ENSMUST00000119552 172 ntBASIC4.68□□□□□ -1.66
Rnf220Q6PDX6 Gm12482-201ENSMUST00000120435 630 ntBASIC4.68□□□□□ -1.66
Rnf220Q6PDX6 Gm13232-201ENSMUST00000121816 632 ntBASIC4.68□□□□□ -1.66
Rnf220Q6PDX6 Gm23211-201ENSMUST00000122717 308 ntBASIC4.68□□□□□ -1.66
Rnf220Q6PDX6 Gm13625-201ENSMUST00000149283 480 ntTSL 5 BASIC4.68□□□□□ -1.66
Rnf220Q6PDX6 Gm23669-201ENSMUST00000157470 128 ntBASIC4.68□□□□□ -1.66
Rnf220Q6PDX6 Gm25907-201ENSMUST00000158486 125 ntBASIC4.68□□□□□ -1.66
Rnf220Q6PDX6 Gm25445-201ENSMUST00000158996 299 ntBASIC4.68□□□□□ -1.66
Rnf220Q6PDX6 Gm17155-201ENSMUST00000165969 473 ntBASIC4.68□□□□□ -1.66
Rnf220Q6PDX6 Obox3-ps5-201ENSMUST00000176412 1003 ntBASIC4.68□□□□□ -1.66
Rnf220Q6PDX6 Gm20777-201ENSMUST00000177818 699 ntAPPRIS P1 BASIC4.68□□□□□ -1.66
Rnf220Q6PDX6 Gm21874-201ENSMUST00000178374 699 ntAPPRIS P1 BASIC4.68□□□□□ -1.66
Rnf220Q6PDX6 Gm20873-201ENSMUST00000179410 699 ntAPPRIS P1 BASIC4.68□□□□□ -1.66
Rnf220Q6PDX6 Trav12n-3-201ENSMUST00000179583 353 ntAPPRIS P1 BASIC4.68□□□□□ -1.66
Rnf220Q6PDX6 Gm20737-201ENSMUST00000179665 699 ntAPPRIS P1 BASIC4.68□□□□□ -1.66
Rnf220Q6PDX6 Vmn2r-ps19-201ENSMUST00000179720 269 ntBASIC4.68□□□□□ -1.66
Rnf220Q6PDX6 Gm24968-201ENSMUST00000179817 107 ntBASIC4.68□□□□□ -1.66
Rnf220Q6PDX6 Gm21310-201ENSMUST00000180130 699 ntAPPRIS P1 BASIC4.68□□□□□ -1.66
Retrieved 100 of 76,532 protein–RNA pairs in 88.8 ms