Protein–RNA interactions for Protein: Q6IRU2

Tpm4, Tropomyosin alpha-4 chain, mousemouse

Predictions only

Length 248 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tpm4Q6IRU2 Gm23948-201ENSMUST00000104030 132 ntBASIC3.79□□□□□ -1.8
Tpm4Q6IRU2 Mier1-203ENSMUST00000106855 1079 ntAPPRIS ALT2 TSL 1 (best) BASIC3.79□□□□□ -1.8
Tpm4Q6IRU2 Gm14050-201ENSMUST00000117052 346 ntBASIC3.79□□□□□ -1.8
Tpm4Q6IRU2 Gm12125-201ENSMUST00000117261 736 ntBASIC3.79□□□□□ -1.8
Tpm4Q6IRU2 Gm15268-201ENSMUST00000118845 352 ntBASIC3.79□□□□□ -1.8
Tpm4Q6IRU2 Gm23775-201ENSMUST00000158991 249 ntBASIC3.79□□□□□ -1.8
Tpm4Q6IRU2 Gm13698-201ENSMUST00000178325 732 ntTSL 5 BASIC3.79□□□□□ -1.8
Tpm4Q6IRU2 Gm13694-202ENSMUST00000178655 732 ntTSL 5 BASIC3.79□□□□□ -1.8
Tpm4Q6IRU2 Gm13696-201ENSMUST00000179311 732 ntTSL 5 BASIC3.79□□□□□ -1.8
Tpm4Q6IRU2 Gm13693-202ENSMUST00000179448 732 ntTSL 5 BASIC3.79□□□□□ -1.8
Tpm4Q6IRU2 Gm13695-202ENSMUST00000179504 732 ntTSL 5 BASIC3.79□□□□□ -1.8
Tpm4Q6IRU2 Gm13697-202ENSMUST00000179552 732 ntTSL 5 BASIC3.79□□□□□ -1.8
Tpm4Q6IRU2 Scgb2b21-201ENSMUST00000185407 520 ntAPPRIS P1 TSL 5 BASIC3.79□□□□□ -1.8
Tpm4Q6IRU2 Gm29329-201ENSMUST00000189053 621 ntTSL 5 BASIC3.79□□□□□ -1.8
Tpm4Q6IRU2 Gm29443-202ENSMUST00000190297 410 ntTSL 3 BASIC3.79□□□□□ -1.8
Tpm4Q6IRU2 Gm28331-201ENSMUST00000191102 621 ntTSL 5 BASIC3.79□□□□□ -1.8
Tpm4Q6IRU2 4930428D20Rik-201ENSMUST00000201886 546 ntTSL 1 (best) BASIC3.79□□□□□ -1.8
Tpm4Q6IRU2 Gm44748-201ENSMUST00000206040 658 ntTSL 5 BASIC3.79□□□□□ -1.8
Tpm4Q6IRU2 Gm45639-201ENSMUST00000211205 710 ntTSL 5 BASIC3.79□□□□□ -1.8
Tpm4Q6IRU2 Vmn1r2-202ENSMUST00000226198 1126 ntAPPRIS P1 BASIC3.79□□□□□ -1.8
Tpm4Q6IRU2 AC100733.1-201ENSMUST00000228494 407 ntBASIC3.79□□□□□ -1.8
Tpm4Q6IRU2 Olfr844-201ENSMUST00000054106 930 ntBASIC3.79□□□□□ -1.8
Tpm4Q6IRU2 Gm25480-201ENSMUST00000083217 133 ntBASIC3.79□□□□□ -1.8
Tpm4Q6IRU2 Zfp72-201ENSMUST00000091481 1629 ntAPPRIS P1 TSL 1 (best) BASIC3.79□□□□□ -1.8
Tpm4Q6IRU2 Vmn1r46-203ENSMUST00000226715 10861 ntAPPRIS P1 BASIC3.79□□□□□ -1.8
Tpm4Q6IRU2 Vmn1r46-205ENSMUST00000228349 10861 ntAPPRIS P1 BASIC3.79□□□□□ -1.8
Tpm4Q6IRU2 Gm18337-201ENSMUST00000219023 5762 ntBASIC3.79□□□□□ -1.8
Tpm4Q6IRU2 Gm3956-201ENSMUST00000164882 2560 ntBASIC3.79□□□□□ -1.8
Tpm4Q6IRU2 Vmn2r36-201ENSMUST00000170402 2561 ntAPPRIS P1 TSL 5 BASIC3.79□□□□□ -1.8
Tpm4Q6IRU2 Olfr109-203ENSMUST00000214938 5550 ntAPPRIS P1 TSL 5 BASIC3.79□□□□□ -1.8
Tpm4Q6IRU2 Gm43958-201ENSMUST00000204360 3544 ntBASIC3.79□□□□□ -1.8
Tpm4Q6IRU2 AC124586.1-201ENSMUST00000221673 2795 ntBASIC3.79□□□□□ -1.8
Tpm4Q6IRU2 Gm13058-201ENSMUST00000117097 1435 ntBASIC3.78□□□□□ -1.8
Tpm4Q6IRU2 Neurod4-201ENSMUST00000061571 3345 ntAPPRIS P1 TSL 1 (best) BASIC3.78□□□□□ -1.8
Tpm4Q6IRU2 Rbm31y-201ENSMUST00000179408 1955 ntAPPRIS P1 BASIC3.78□□□□□ -1.8
Tpm4Q6IRU2 Gm21379-201ENSMUST00000179772 1955 ntBASIC3.78□□□□□ -1.8
Tpm4Q6IRU2 Trbv15-201ENSMUST00000103273 370 ntAPPRIS P1 BASIC3.78□□□□□ -1.8
Tpm4Q6IRU2 Igkv14-111-201ENSMUST00000103320 368 ntAPPRIS P1 BASIC3.78□□□□□ -1.8
Tpm4Q6IRU2 Gm16216-201ENSMUST00000118970 1111 ntBASIC3.78□□□□□ -1.8
Tpm4Q6IRU2 Gm22034-201ENSMUST00000157283 134 ntBASIC3.78□□□□□ -1.8
Tpm4Q6IRU2 Gm22840-201ENSMUST00000158444 136 ntBASIC3.78□□□□□ -1.8
Tpm4Q6IRU2 Vmn2r-ps121-201ENSMUST00000176230 802 ntBASIC3.78□□□□□ -1.8
Tpm4Q6IRU2 1700066N21Rik-201ENSMUST00000190123 783 ntTSL 1 (best) BASIC3.78□□□□□ -1.8
Tpm4Q6IRU2 Gm7182-201ENSMUST00000193351 732 ntBASIC3.78□□□□□ -1.8
Tpm4Q6IRU2 4930513D17Rik-203ENSMUST00000202800 1159 ntTSL 1 (best) BASIC3.78□□□□□ -1.8
Tpm4Q6IRU2 Gm45608-201ENSMUST00000210948 389 ntBASIC3.78□□□□□ -1.8
Tpm4Q6IRU2 Prl4a1-201ENSMUST00000021779 876 ntAPPRIS P1 TSL 1 (best) BASIC3.78□□□□□ -1.8
Tpm4Q6IRU2 AC140254.1-201ENSMUST00000220063 331 ntBASIC3.78□□□□□ -1.8
Tpm4Q6IRU2 Gm46369-201ENSMUST00000221577 401 ntBASIC3.78□□□□□ -1.8
Tpm4Q6IRU2 AC132315.1-201ENSMUST00000221771 390 ntBASIC3.78□□□□□ -1.8
Tpm4Q6IRU2 Smim15-204ENSMUST00000224390 645 ntAPPRIS P1 BASIC3.78□□□□□ -1.8
Tpm4Q6IRU2 Olfr873-201ENSMUST00000053919 1062 ntAPPRIS P2 BASIC3.78□□□□□ -1.8
Tpm4Q6IRU2 Olfr812-201ENSMUST00000057775 1043 ntAPPRIS P1 BASIC3.78□□□□□ -1.8
Tpm4Q6IRU2 Olfr780-201ENSMUST00000063168 1025 ntAPPRIS P1 BASIC3.78□□□□□ -1.8
Tpm4Q6IRU2 Olfr1136-201ENSMUST00000077471 1067 ntAPPRIS P1 BASIC3.78□□□□□ -1.8
Tpm4Q6IRU2 Prl2b1-201ENSMUST00000091678 891 ntAPPRIS ALT2 TSL 1 (best) BASIC3.78□□□□□ -1.8
Tpm4Q6IRU2 Gm156-201ENSMUST00000095409 682 ntAPPRIS P1 TSL 1 (best) BASIC3.78□□□□□ -1.8
Tpm4Q6IRU2 Gm42888-201ENSMUST00000202425 4361 ntBASIC3.78□□□□□ -1.8
Tpm4Q6IRU2 Olfr361-202ENSMUST00000214969 2749 ntAPPRIS P1 TSL 5 BASIC3.78□□□□□ -1.8
Tpm4Q6IRU2 4931412I15Rik-201ENSMUST00000207844 1448 ntBASIC3.78□□□□□ -1.8
Tpm4Q6IRU2 AC149294.7-201ENSMUST00000227475 1432 ntBASIC3.78□□□□□ -1.8
Tpm4Q6IRU2 Ccr2-202ENSMUST00000165984 3515 ntAPPRIS P1 BASIC3.77□□□□□ -1.81
Tpm4Q6IRU2 Cfh-206ENSMUST00000192880 3746 ntTSL 5 BASIC3.77□□□□□ -1.81
Tpm4Q6IRU2 Olfr17-202ENSMUST00000210568 3666 ntAPPRIS P1 TSL 5 BASIC3.77□□□□□ -1.81
Tpm4Q6IRU2 Gm15356-201ENSMUST00000140669 2741 ntTSL 1 (best) BASIC3.77□□□□□ -1.81
Tpm4Q6IRU2 Mir193b-201ENSMUST00000103784 79 ntBASIC3.77□□□□□ -1.81
Tpm4Q6IRU2 Gm15421-202ENSMUST00000118224 399 ntBASIC3.77□□□□□ -1.81
Tpm4Q6IRU2 Gm15195-201ENSMUST00000118775 263 ntBASIC3.77□□□□□ -1.81
Tpm4Q6IRU2 Gm16055-201ENSMUST00000161366 626 ntTSL 2 BASIC3.77□□□□□ -1.81
Tpm4Q6IRU2 Clec5a-204ENSMUST00000177178 665 ntAPPRIS ALT2 TSL 1 (best) BASIC3.77□□□□□ -1.81
Tpm4Q6IRU2 Gm31693-201ENSMUST00000200150 909 ntTSL 1 (best) BASIC3.77□□□□□ -1.81
Tpm4Q6IRU2 Gm44941-201ENSMUST00000204216 627 ntTSL 2 BASIC3.77□□□□□ -1.81
Tpm4Q6IRU2 Gm18016-201ENSMUST00000216119 801 ntBASIC3.77□□□□□ -1.81
Tpm4Q6IRU2 AC159622.3-201ENSMUST00000221010 361 ntTSL 1 (best) BASIC3.77□□□□□ -1.81
Tpm4Q6IRU2 Eif1-ps2-201ENSMUST00000221990 339 ntBASIC3.77□□□□□ -1.81
Tpm4Q6IRU2 Gm9964-201ENSMUST00000068448 728 ntAPPRIS P1 BASIC3.77□□□□□ -1.81
Tpm4Q6IRU2 Olfr262-201ENSMUST00000087818 939 ntAPPRIS P1 BASIC3.77□□□□□ -1.81
Tpm4Q6IRU2 AC132336.1-201ENSMUST00000222844 1740 ntBASIC3.77□□□□□ -1.81
Tpm4Q6IRU2 Gm38090-201ENSMUST00000195733 1942 ntBASIC3.77□□□□□ -1.81
Tpm4Q6IRU2 Gm12128-201ENSMUST00000131013 2914 ntTSL 1 (best) BASIC3.77□□□□□ -1.81
Tpm4Q6IRU2 Zfp951-201ENSMUST00000089906 1356 ntAPPRIS ALT2 TSL 5 BASIC3.76□□□□□ -1.81
Tpm4Q6IRU2 Gm38699-201ENSMUST00000221301 1740 ntBASIC3.76□□□□□ -1.81
Tpm4Q6IRU2 Gm14308-203ENSMUST00000119149 1458 ntTSL 1 (best) BASIC3.76□□□□□ -1.81
Tpm4Q6IRU2 Gm14434-202ENSMUST00000120959 1458 ntTSL 1 (best) BASIC3.76□□□□□ -1.81
Tpm4Q6IRU2 Olfr1049-202ENSMUST00000216185 1471 ntAPPRIS P1 TSL 5 BASIC3.76□□□□□ -1.81
Tpm4Q6IRU2 Fbxw16-201ENSMUST00000084984 1497 ntAPPRIS P1 TSL 1 (best) BASIC3.76□□□□□ -1.81
Tpm4Q6IRU2 Gm10488-201ENSMUST00000101657 874 ntAPPRIS P1 TSL 1 (best) BASIC3.76□□□□□ -1.81
Tpm4Q6IRU2 Gm5935-201ENSMUST00000101667 875 ntAPPRIS P1 TSL 1 (best) BASIC3.76□□□□□ -1.81
Tpm4Q6IRU2 Gm24890-201ENSMUST00000104389 102 ntBASIC3.76□□□□□ -1.81
Tpm4Q6IRU2 Gm11874-201ENSMUST00000117437 130 ntBASIC3.76□□□□□ -1.81
Tpm4Q6IRU2 Vmn1r-ps126-201ENSMUST00000117681 926 ntBASIC3.76□□□□□ -1.81
Tpm4Q6IRU2 Gm14975-201ENSMUST00000118741 664 ntBASIC3.76□□□□□ -1.81
Tpm4Q6IRU2 Gm13228-201ENSMUST00000118937 634 ntBASIC3.76□□□□□ -1.81
Tpm4Q6IRU2 Gm12739-201ENSMUST00000119769 382 ntBASIC3.76□□□□□ -1.81
Tpm4Q6IRU2 Gm14991-201ENSMUST00000119913 598 ntBASIC3.76□□□□□ -1.81
Tpm4Q6IRU2 Olfr990-ps1-201ENSMUST00000120485 904 ntBASIC3.76□□□□□ -1.81
Tpm4Q6IRU2 Gm13431-201ENSMUST00000122948 476 ntTSL 2 BASIC3.76□□□□□ -1.81
Tpm4Q6IRU2 Gm14095-201ENSMUST00000134264 516 ntTSL 3 BASIC3.76□□□□□ -1.81
Tpm4Q6IRU2 Gm15461-201ENSMUST00000143488 235 ntTSL 3 BASIC3.76□□□□□ -1.81
Tpm4Q6IRU2 Gm15323-201ENSMUST00000156109 429 ntTSL 3 BASIC3.76□□□□□ -1.81
Retrieved 100 of 76,532 protein–RNA pairs in 87.7 ms