Protein–RNA interactions for Protein: Q61164

Ctcf, Transcriptional repressor CTCF, mousemouse

Known RBP Predictions only

Length 736 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CtcfQ61164 Gm31260-201ENSMUST00000193478 696 ntBASIC4.6□□□□□ -1.67
CtcfQ61164 Gm37441-201ENSMUST00000194430 678 ntBASIC4.6□□□□□ -1.67
CtcfQ61164 4930558C23Rik-201ENSMUST00000196239 731 ntAPPRIS P1 TSL 1 (best) BASIC4.6□□□□□ -1.67
CtcfQ61164 Gm31752-201ENSMUST00000199456 856 ntTSL 2 BASIC4.6□□□□□ -1.67
CtcfQ61164 Gm43892-201ENSMUST00000204373 265 ntBASIC4.6□□□□□ -1.67
CtcfQ61164 Gm8132-201ENSMUST00000204938 640 ntBASIC4.6□□□□□ -1.67
CtcfQ61164 Gm38991-201ENSMUST00000205504 138 ntTSL 5 BASIC4.6□□□□□ -1.67
CtcfQ61164 Gm7726-201ENSMUST00000206241 231 ntBASIC4.6□□□□□ -1.67
CtcfQ61164 Gm9375-201ENSMUST00000208899 903 ntBASIC4.6□□□□□ -1.67
CtcfQ61164 Arl2bp-203ENSMUST00000211858 318 ntTSL 5 BASIC4.6□□□□□ -1.67
CtcfQ61164 Olfr1119-ps1-201ENSMUST00000215282 634 ntBASIC4.6□□□□□ -1.67
CtcfQ61164 Gm18891-201ENSMUST00000216734 1087 ntBASIC4.6□□□□□ -1.67
CtcfQ61164 Gm33091-201ENSMUST00000217798 748 ntTSL 3 BASIC4.6□□□□□ -1.67
CtcfQ61164 AC158523.2-201ENSMUST00000222708 548 ntBASIC4.6□□□□□ -1.67
CtcfQ61164 Gm46401-202ENSMUST00000223425 803 ntTSL 5 BASIC4.6□□□□□ -1.67
CtcfQ61164 n-R5s160-201ENSMUST00000083096 120 ntBASIC4.6□□□□□ -1.67
CtcfQ61164 Olfr593-201ENSMUST00000098206 984 ntAPPRIS P2 BASIC4.6□□□□□ -1.67
CtcfQ61164 Olfr111-202ENSMUST00000214259 2620 ntAPPRIS P1 TSL 5 BASIC4.6□□□□□ -1.67
CtcfQ61164 Casp12-201ENSMUST00000027009 2649 ntAPPRIS P1 TSL 1 (best) BASIC4.6□□□□□ -1.67
CtcfQ61164 Gm6215-201ENSMUST00000119297 1386 ntBASIC4.6□□□□□ -1.67
CtcfQ61164 Olfr1019-202ENSMUST00000213515 3031 ntAPPRIS P1 TSL 5 BASIC4.6□□□□□ -1.67
CtcfQ61164 AC122357.2-201ENSMUST00000220732 1525 ntBASIC4.6□□□□□ -1.67
CtcfQ61164 Klhl13-205ENSMUST00000115319 3349 ntAPPRIS P2 TSL 1 (best) BASIC4.6□□□□□ -1.67
CtcfQ61164 Olfr575-202ENSMUST00000213477 3512 ntAPPRIS P1 TSL 5 BASIC4.6□□□□□ -1.67
CtcfQ61164 Dync2h1-204ENSMUST00000140466 14264 ntAPPRIS P2 TSL 5 BASIC4.6□□□□□ -1.67
CtcfQ61164 Cep290-206ENSMUST00000219765 7985 ntTSL 5 BASIC4.6□□□□□ -1.67
CtcfQ61164 Vmn2r-ps45-201ENSMUST00000174138 2435 ntBASIC4.6□□□□□ -1.67
CtcfQ61164 Zfp850-203ENSMUST00000180502 6163 ntAPPRIS P1 TSL 3 BASIC4.59□□□□□ -1.67
CtcfQ61164 Gm5248-201ENSMUST00000186108 4046 ntBASIC4.59□□□□□ -1.67
CtcfQ61164 Gm6913-201ENSMUST00000100019 348 ntBASIC4.59□□□□□ -1.67
CtcfQ61164 Gm22472-201ENSMUST00000104115 134 ntBASIC4.59□□□□□ -1.67
CtcfQ61164 Zfp930-201ENSMUST00000110216 1323 ntTSL 5 BASIC4.59□□□□□ -1.67
CtcfQ61164 4933413L06Rik-201ENSMUST00000110292 809 ntTSL 2 BASIC4.59□□□□□ -1.67
CtcfQ61164 Gm6806-201ENSMUST00000120092 1006 ntBASIC4.59□□□□□ -1.67
CtcfQ61164 Gm12825-201ENSMUST00000120249 563 ntBASIC4.59□□□□□ -1.67
CtcfQ61164 Gm11896-201ENSMUST00000121105 820 ntBASIC4.59□□□□□ -1.67
CtcfQ61164 Gm8080-201ENSMUST00000122046 1155 ntBASIC4.59□□□□□ -1.67
CtcfQ61164 6030471H07Rik-201ENSMUST00000125884 492 ntTSL 1 (best) BASIC4.59□□□□□ -1.67
CtcfQ61164 Olfr405-ps1-202ENSMUST00000127098 711 ntTSL 3 BASIC4.59□□□□□ -1.67
CtcfQ61164 Gm15656-201ENSMUST00000132076 615 ntTSL 3 BASIC4.59□□□□□ -1.67
CtcfQ61164 R3hcc1l-202ENSMUST00000160107 950 ntAPPRIS ALT2 TSL 2 BASIC4.59□□□□□ -1.67
CtcfQ61164 Gm6650-201ENSMUST00000166710 614 ntBASIC4.59□□□□□ -1.67
CtcfQ61164 Gm5929-201ENSMUST00000166883 487 ntBASIC4.59□□□□□ -1.67
CtcfQ61164 Fam184a-206ENSMUST00000169866 501 ntTSL 5 BASIC4.59□□□□□ -1.67
CtcfQ61164 Gm20834-201ENSMUST00000179558 684 ntAPPRIS P1 BASIC4.59□□□□□ -1.67
CtcfQ61164 Gm26914-201ENSMUST00000182262 223 ntBASIC4.59□□□□□ -1.67
CtcfQ61164 Gm18635-201ENSMUST00000199020 1060 ntBASIC4.59□□□□□ -1.67
CtcfQ61164 Gm5876-201ENSMUST00000203735 243 ntBASIC4.59□□□□□ -1.67
CtcfQ61164 Gm8035-201ENSMUST00000204625 687 ntBASIC4.59□□□□□ -1.67
CtcfQ61164 Gm19908-201ENSMUST00000204684 391 ntBASIC4.59□□□□□ -1.67
CtcfQ61164 Gm44259-201ENSMUST00000204996 298 ntBASIC4.59□□□□□ -1.67
CtcfQ61164 Gm45458-201ENSMUST00000209900 522 ntBASIC4.59□□□□□ -1.67
CtcfQ61164 Olfr1142-ps1-201ENSMUST00000213624 805 ntBASIC4.59□□□□□ -1.67
CtcfQ61164 Olfr799-204ENSMUST00000216446 1513 ntAPPRIS P1 TSL 5 BASIC4.59□□□□□ -1.67
CtcfQ61164 Olfr1031-202ENSMUST00000216807 1946 ntAPPRIS P1 TSL 5 BASIC4.59□□□□□ -1.67
CtcfQ61164 AC153568.1-201ENSMUST00000218165 341 ntTSL 2 BASIC4.59□□□□□ -1.67
CtcfQ61164 AC158641.1-201ENSMUST00000218933 229 ntBASIC4.59□□□□□ -1.67
CtcfQ61164 AC155305.1-201ENSMUST00000222207 319 ntBASIC4.59□□□□□ -1.67
CtcfQ61164 AC131068.1-201ENSMUST00000226891 482 ntBASIC4.59□□□□□ -1.67
CtcfQ61164 CT030684.2-201ENSMUST00000228946 826 ntBASIC4.59□□□□□ -1.67
CtcfQ61164 2310003L06Rik-201ENSMUST00000007601 1603 ntAPPRIS P1 TSL 1 (best) BASIC4.59□□□□□ -1.67
CtcfQ61164 Olfr191-201ENSMUST00000078517 930 ntAPPRIS P1 BASIC4.59□□□□□ -1.67
CtcfQ61164 mt-Cytb-201ENSMUST00000082421 1144 ntAPPRIS P1 BASIC4.59□□□□□ -1.67
CtcfQ61164 Gm23928-201ENSMUST00000082469 145 ntBASIC4.59□□□□□ -1.67
CtcfQ61164 Gm22350-201ENSMUST00000083924 156 ntBASIC4.59□□□□□ -1.67
CtcfQ61164 4921539E11Rik-202ENSMUST00000097944 1683 ntTSL 1 (best) BASIC4.59□□□□□ -1.67
CtcfQ61164 Has2-201ENSMUST00000050544 4237 ntAPPRIS P1 TSL 1 (best) BASIC4.59□□□□□ -1.68
CtcfQ61164 Olfr787-202ENSMUST00000213329 4958 ntAPPRIS P1 TSL 5 BASIC4.58□□□□□ -1.68
CtcfQ61164 Vmn2r7-202ENSMUST00000161972 3583 ntAPPRIS ALT2 TSL 5 BASIC4.58□□□□□ -1.68
CtcfQ61164 Olfr118-203ENSMUST00000216551 1772 ntAPPRIS P1 TSL 5 BASIC4.58□□□□□ -1.68
CtcfQ61164 Fbxw28-201ENSMUST00000112039 1497 ntAPPRIS P4 TSL 1 (best) BASIC4.58□□□□□ -1.68
CtcfQ61164 Mapk8-203ENSMUST00000111943 1310 ntTSL 1 (best) BASIC4.58□□□□□ -1.68
CtcfQ61164 Olfr1140-203ENSMUST00000217572 1327 ntAPPRIS P1 BASIC4.58□□□□□ -1.68
CtcfQ61164 Gm14172-201ENSMUST00000118255 644 ntBASIC4.58□□□□□ -1.68
CtcfQ61164 Gm14975-201ENSMUST00000118741 664 ntBASIC4.58□□□□□ -1.68
CtcfQ61164 Olfr1103-ps1-201ENSMUST00000119132 937 ntBASIC4.58□□□□□ -1.68
CtcfQ61164 Gm11398-201ENSMUST00000120330 320 ntBASIC4.58□□□□□ -1.68
CtcfQ61164 Gm12708-201ENSMUST00000126143 349 ntTSL 5 BASIC4.58□□□□□ -1.68
CtcfQ61164 Gm22536-201ENSMUST00000158171 134 ntBASIC4.58□□□□□ -1.68
CtcfQ61164 Gm17109-201ENSMUST00000163985 358 ntBASIC4.58□□□□□ -1.68
CtcfQ61164 Vmn1r163-201ENSMUST00000164537 924 ntAPPRIS P1 BASIC4.58□□□□□ -1.68
CtcfQ61164 Gm8224-201ENSMUST00000166178 497 ntBASIC4.58□□□□□ -1.68
CtcfQ61164 Vmn1r135-201ENSMUST00000170931 924 ntAPPRIS P1 BASIC4.58□□□□□ -1.68
CtcfQ61164 Mir5098-201ENSMUST00000175320 82 ntBASIC4.58□□□□□ -1.68
CtcfQ61164 Vmn1r148-201ENSMUST00000177774 924 ntAPPRIS P1 BASIC4.58□□□□□ -1.68
CtcfQ61164 Vmn1r100-201ENSMUST00000177815 924 ntAPPRIS P1 BASIC4.58□□□□□ -1.68
CtcfQ61164 Gm21894-201ENSMUST00000179631 546 ntBASIC4.58□□□□□ -1.68
CtcfQ61164 Gm26991-201ENSMUST00000180950 620 ntBASIC4.58□□□□□ -1.68
CtcfQ61164 Vmn1r181-201ENSMUST00000181796 1080 ntAPPRIS P1 BASIC4.58□□□□□ -1.68
CtcfQ61164 Gm26713-201ENSMUST00000181827 627 ntTSL 1 (best) BASIC4.58□□□□□ -1.68
CtcfQ61164 Gm27222-201ENSMUST00000183398 427 ntTSL 5 BASIC4.58□□□□□ -1.68
CtcfQ61164 Mir6393-201ENSMUST00000183709 94 ntBASIC4.58□□□□□ -1.68
CtcfQ61164 Gm27883-201ENSMUST00000183941 102 ntBASIC4.58□□□□□ -1.68
CtcfQ61164 Gm20896-202ENSMUST00000188585 921 ntAPPRIS P1 TSL 1 (best) BASIC4.58□□□□□ -1.68
CtcfQ61164 Gm29184-201ENSMUST00000190038 334 ntBASIC4.58□□□□□ -1.68
CtcfQ61164 Olfr625-ps1-202ENSMUST00000190218 927 ntAPPRIS ALT2 BASIC4.58□□□□□ -1.68
CtcfQ61164 Gm37202-201ENSMUST00000193679 361 ntTSL 3 BASIC4.58□□□□□ -1.68
CtcfQ61164 Gm37910-201ENSMUST00000194770 217 ntTSL 5 BASIC4.58□□□□□ -1.68
CtcfQ61164 Dnajc5g-202ENSMUST00000201740 581 ntAPPRIS ALT2 TSL 3 BASIC4.58□□□□□ -1.68
CtcfQ61164 Gm42530-201ENSMUST00000202683 550 ntTSL 1 (best) BASIC4.58□□□□□ -1.68
Retrieved 100 of 76,532 protein–RNA pairs in 88.9 ms