Protein–RNA interactions for Protein: Q5NCC9

Trim58, E3 ubiquitin-protein ligase TRIM58, mousemouse

Predictions only

Length 485 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim58Q5NCC9 Gm38356-201ENSMUST00000194313 408 ntBASIC4.38□□□□□ -1.71
Trim58Q5NCC9 Gm43617-201ENSMUST00000196418 606 ntTSL 2 BASIC4.38□□□□□ -1.71
Trim58Q5NCC9 Gm42565-201ENSMUST00000197839 572 ntTSL 5 BASIC4.38□□□□□ -1.71
Trim58Q5NCC9 Gm8748-201ENSMUST00000211125 587 ntBASIC4.38□□□□□ -1.71
Trim58Q5NCC9 4930401A07Rik-201ENSMUST00000214657 746 ntTSL 1 (best) BASIC4.38□□□□□ -1.71
Trim58Q5NCC9 CT030247.1-201ENSMUST00000216810 267 ntBASIC4.38□□□□□ -1.71
Trim58Q5NCC9 Acbd7-202ENSMUST00000228935 534 ntAPPRIS ALT1 BASIC4.38□□□□□ -1.71
Trim58Q5NCC9 Olfr1148-201ENSMUST00000077580 945 ntAPPRIS P1 BASIC4.38□□□□□ -1.71
Trim58Q5NCC9 Dynlrb2-201ENSMUST00000078170 515 ntAPPRIS P1 TSL 1 (best) BASIC4.38□□□□□ -1.71
Trim58Q5NCC9 Gm10665-201ENSMUST00000098720 966 ntAPPRIS P1 BASIC4.38□□□□□ -1.71
Trim58Q5NCC9 Gm10666-201ENSMUST00000098722 966 ntAPPRIS P1 BASIC4.38□□□□□ -1.71
Trim58Q5NCC9 Vmn1r114-201ENSMUST00000098737 966 ntAPPRIS P1 BASIC4.38□□□□□ -1.71
Trim58Q5NCC9 Gm10670-201ENSMUST00000098744 966 ntAPPRIS P1 BASIC4.38□□□□□ -1.71
Trim58Q5NCC9 Vmn1r93-201ENSMUST00000098747 966 ntAPPRIS P1 BASIC4.38□□□□□ -1.71
Trim58Q5NCC9 Olfr1233-201ENSMUST00000099784 1042 ntAPPRIS P1 BASIC4.38□□□□□ -1.71
Trim58Q5NCC9 Gm10811-201ENSMUST00000221985 2448 ntBASIC4.38□□□□□ -1.71
Trim58Q5NCC9 Gm38286-201ENSMUST00000195128 3105 ntBASIC4.38□□□□□ -1.71
Trim58Q5NCC9 Gm13974-201ENSMUST00000144368 1454 ntTSL 1 (best) BASIC4.37□□□□□ -1.71
Trim58Q5NCC9 Gm18432-201ENSMUST00000195568 1451 ntBASIC4.37□□□□□ -1.71
Trim58Q5NCC9 Gm45848-201ENSMUST00000212932 1871 ntTSL 5 BASIC4.37□□□□□ -1.71
Trim58Q5NCC9 Gm43882-201ENSMUST00000204871 2264 ntBASIC4.37□□□□□ -1.71
Trim58Q5NCC9 Wfdc18-201ENSMUST00000001009 521 ntAPPRIS P1 TSL 1 (best) BASIC4.37□□□□□ -1.71
Trim58Q5NCC9 Gm15014-201ENSMUST00000120742 258 ntBASIC4.37□□□□□ -1.71
Trim58Q5NCC9 Gm15762-201ENSMUST00000126447 333 ntTSL 1 (best) BASIC4.37□□□□□ -1.71
Trim58Q5NCC9 Gm7855-201ENSMUST00000137737 687 ntBASIC4.37□□□□□ -1.71
Trim58Q5NCC9 Gm26000-201ENSMUST00000157991 107 ntBASIC4.37□□□□□ -1.71
Trim58Q5NCC9 C130026I21Rik-207ENSMUST00000162421 591 ntAPPRIS ALT2 TSL 1 (best) BASIC4.37□□□□□ -1.71
Trim58Q5NCC9 Gm5916-201ENSMUST00000168452 1142 ntAPPRIS P1 TSL 1 (best) BASIC4.37□□□□□ -1.71
Trim58Q5NCC9 Gm8267-202ENSMUST00000169062 1240 ntAPPRIS P2 TSL 5 BASIC4.37□□□□□ -1.71
Trim58Q5NCC9 Gm29492-201ENSMUST00000187124 457 ntBASIC4.37□□□□□ -1.71
Trim58Q5NCC9 4930590L20Rik-201ENSMUST00000193820 553 ntTSL 1 (best) BASIC4.37□□□□□ -1.71
Trim58Q5NCC9 Gm6510-201ENSMUST00000195916 574 ntBASIC4.37□□□□□ -1.71
Trim58Q5NCC9 Gm44355-201ENSMUST00000200417 104 ntBASIC4.37□□□□□ -1.71
Trim58Q5NCC9 Klra14-ps-202ENSMUST00000203601 1104 ntTSL 5 BASIC4.37□□□□□ -1.71
Trim58Q5NCC9 Gm19726-201ENSMUST00000205008 240 ntBASIC4.37□□□□□ -1.71
Trim58Q5NCC9 Gm35876-201ENSMUST00000205044 459 ntBASIC4.37□□□□□ -1.71
Trim58Q5NCC9 Gm44919-201ENSMUST00000208587 1073 ntBASIC4.37□□□□□ -1.71
Trim58Q5NCC9 1700024I08Rik-203ENSMUST00000222372 754 ntTSL 1 (best) BASIC4.37□□□□□ -1.71
Trim58Q5NCC9 CT030254.3-201ENSMUST00000225959 1231 ntBASIC4.37□□□□□ -1.71
Trim58Q5NCC9 AC125539.1-202ENSMUST00000226449 670 ntBASIC4.37□□□□□ -1.71
Trim58Q5NCC9 Gm21994-201ENSMUST00000063463 990 ntAPPRIS P1 TSL 5 BASIC4.37□□□□□ -1.71
Trim58Q5NCC9 Gm25739-201ENSMUST00000082886 107 ntBASIC4.37□□□□□ -1.71
Trim58Q5NCC9 Gm22864-201ENSMUST00000083950 130 ntBASIC4.37□□□□□ -1.71
Trim58Q5NCC9 Gm11782-201ENSMUST00000131675 2804 ntTSL 1 (best) BASIC4.37□□□□□ -1.71
Trim58Q5NCC9 Gm37936-201ENSMUST00000194647 1322 ntBASIC4.37□□□□□ -1.71
Trim58Q5NCC9 Olfr988-202ENSMUST00000111597 1702 ntAPPRIS P1 TSL 3 BASIC4.37□□□□□ -1.71
Trim58Q5NCC9 Olfr1404-202ENSMUST00000216556 3305 ntAPPRIS P1 TSL 5 BASIC4.37□□□□□ -1.71
Trim58Q5NCC9 Glmn-203ENSMUST00000100949 1759 ntTSL 1 (best) BASIC4.37□□□□□ -1.71
Trim58Q5NCC9 Fbxw14-203ENSMUST00000198844 1786 ntAPPRIS P3 TSL 1 (best) BASIC4.37□□□□□ -1.71
Trim58Q5NCC9 AC131068.3-201ENSMUST00000228438 1456 ntBASIC4.37□□□□□ -1.71
Trim58Q5NCC9 Gm5590-202ENSMUST00000186976 2315 ntTSL 1 (best) BASIC4.37□□□□□ -1.71
Trim58Q5NCC9 Ms4a2-204ENSMUST00000186978 2391 ntTSL 1 (best) BASIC4.36□□□□□ -1.71
Trim58Q5NCC9 Gm45884-201ENSMUST00000209540 3416 ntBASIC4.36□□□□□ -1.71
Trim58Q5NCC9 Vmn1r47-202ENSMUST00000227229 6733 ntAPPRIS P1 BASIC4.36□□□□□ -1.71
Trim58Q5NCC9 Vmn1r47-204ENSMUST00000228680 6717 ntAPPRIS P1 BASIC4.36□□□□□ -1.71
Trim58Q5NCC9 Igkv7-33-201ENSMUST00000103376 362 ntAPPRIS ALT2 BASIC4.36□□□□□ -1.71
Trim58Q5NCC9 Gm15018-201ENSMUST00000117090 633 ntBASIC4.36□□□□□ -1.71
Trim58Q5NCC9 Gm12125-201ENSMUST00000117261 736 ntBASIC4.36□□□□□ -1.71
Trim58Q5NCC9 Gm11406-201ENSMUST00000117418 484 ntBASIC4.36□□□□□ -1.71
Trim58Q5NCC9 Gm9157-201ENSMUST00000117673 225 ntBASIC4.36□□□□□ -1.71
Trim58Q5NCC9 Gm12427-201ENSMUST00000117719 302 ntBASIC4.36□□□□□ -1.71
Trim58Q5NCC9 Klrc1-203ENSMUST00000118447 684 ntAPPRIS P3 TSL 1 (best) BASIC4.36□□□□□ -1.71
Trim58Q5NCC9 Gm14352-201ENSMUST00000119250 449 ntBASIC4.36□□□□□ -1.71
Trim58Q5NCC9 Gm12691-201ENSMUST00000120186 456 ntBASIC4.36□□□□□ -1.71
Trim58Q5NCC9 Gm14656-201ENSMUST00000120342 502 ntBASIC4.36□□□□□ -1.71
Trim58Q5NCC9 Gm13743-201ENSMUST00000121486 724 ntBASIC4.36□□□□□ -1.71
Trim58Q5NCC9 Gm12910-201ENSMUST00000135902 724 ntTSL 5 BASIC4.36□□□□□ -1.71
Trim58Q5NCC9 Gm6969-201ENSMUST00000140065 342 ntBASIC4.36□□□□□ -1.71
Trim58Q5NCC9 Gm23702-201ENSMUST00000158840 130 ntBASIC4.36□□□□□ -1.71
Trim58Q5NCC9 Gm16243-201ENSMUST00000160351 494 ntTSL 3 BASIC4.36□□□□□ -1.71
Trim58Q5NCC9 Vmn1r5-201ENSMUST00000164307 1056 ntAPPRIS P1 BASIC4.36□□□□□ -1.71
Trim58Q5NCC9 Gm44817-201ENSMUST00000205416 453 ntBASIC4.36□□□□□ -1.71
Trim58Q5NCC9 Olfr1488-ps1-201ENSMUST00000207436 136 ntBASIC4.36□□□□□ -1.71
Trim58Q5NCC9 Gm44611-201ENSMUST00000207507 355 ntBASIC4.36□□□□□ -1.71
Trim58Q5NCC9 Gm44656-201ENSMUST00000208428 490 ntBASIC4.36□□□□□ -1.71
Trim58Q5NCC9 Gm4928-201ENSMUST00000219622 850 ntBASIC4.36□□□□□ -1.71
Trim58Q5NCC9 AC153361.1-201ENSMUST00000219679 247 ntBASIC4.36□□□□□ -1.71
Trim58Q5NCC9 Gm26571-203ENSMUST00000221865 555 ntTSL 2 BASIC4.36□□□□□ -1.71
Trim58Q5NCC9 Acrv1-201ENSMUST00000034620 1101 ntAPPRIS P1 TSL 1 (best) BASIC4.36□□□□□ -1.71
Trim58Q5NCC9 Gm4779-201ENSMUST00000056225 672 ntTSL 5 BASIC4.36□□□□□ -1.71
Trim58Q5NCC9 Gm26437-201ENSMUST00000082595 105 ntBASIC4.36□□□□□ -1.71
Trim58Q5NCC9 Neb-203ENSMUST00000075301 21456 ntAPPRIS ALT2 TSL 5 BASIC4.36□□□□□ -1.71
Trim58Q5NCC9 Olfr364-ps1-203ENSMUST00000217298 2894 ntAPPRIS P1 TSL 5 BASIC4.36□□□□□ -1.71
Trim58Q5NCC9 Olfr548-ps1-202ENSMUST00000210064 4287 ntAPPRIS P1 TSL 5 BASIC4.36□□□□□ -1.71
Trim58Q5NCC9 Gm14305-203ENSMUST00000108983 1497 ntAPPRIS P1 TSL 3 BASIC4.36□□□□□ -1.71
Trim58Q5NCC9 Gm2026-202ENSMUST00000109008 1497 ntAPPRIS P1 TSL 5 BASIC4.36□□□□□ -1.71
Trim58Q5NCC9 Gm4724-202ENSMUST00000109046 1497 ntAPPRIS P1 TSL 5 BASIC4.36□□□□□ -1.71
Trim58Q5NCC9 Gm4631-201ENSMUST00000109050 1494 ntTSL 5 BASIC4.36□□□□□ -1.71
Trim58Q5NCC9 Gm14434-203ENSMUST00000122097 1497 ntAPPRIS P1 TSL 5 BASIC4.36□□□□□ -1.71
Trim58Q5NCC9 Gm11007-202ENSMUST00000178120 1497 ntAPPRIS P1 TSL 5 BASIC4.36□□□□□ -1.71
Trim58Q5NCC9 Gm2007-202ENSMUST00000178133 1497 ntAPPRIS P1 TSL 5 BASIC4.36□□□□□ -1.71
Trim58Q5NCC9 Gm11007-203ENSMUST00000185834 1494 ntTSL 5 BASIC4.36□□□□□ -1.71
Trim58Q5NCC9 Gm2007-203ENSMUST00000189494 1494 ntTSL 5 BASIC4.36□□□□□ -1.71
Trim58Q5NCC9 Gm35835-202ENSMUST00000216984 3350 ntTSL 1 (best) BASIC4.35□□□□□ -1.71
Trim58Q5NCC9 Sacs-203ENSMUST00000119943 14991 ntAPPRIS ALT2 TSL 5 BASIC4.35□□□□□ -1.71
Trim58Q5NCC9 Gm24987-201ENSMUST00000104453 134 ntBASIC4.35□□□□□ -1.71
Trim58Q5NCC9 Gm13167-201ENSMUST00000118554 578 ntBASIC4.35□□□□□ -1.71
Trim58Q5NCC9 Gm14687-201ENSMUST00000120206 363 ntBASIC4.35□□□□□ -1.71
Trim58Q5NCC9 Gm11896-201ENSMUST00000121105 820 ntBASIC4.35□□□□□ -1.71
Trim58Q5NCC9 Gm25839-201ENSMUST00000158921 103 ntBASIC4.35□□□□□ -1.71
Retrieved 100 of 76,532 protein–RNA pairs in 96.4 ms