Protein–RNA interactions for Protein: Q3UWA4

Trim40, Tripartite motif-containing protein 40, mousemouse

Predictions only

Length 246 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim40Q3UWA4 Gm10356-201ENSMUST00000097152 1258 ntBASIC3.72□□□□□ -1.81
Trim40Q3UWA4 Olfr679-201ENSMUST00000098158 952 ntAPPRIS P1 BASIC3.72□□□□□ -1.81
Trim40Q3UWA4 Fam111a-204ENSMUST00000151307 3687 ntAPPRIS ALT2 TSL 5 BASIC3.72□□□□□ -1.81
Trim40Q3UWA4 Muc15-202ENSMUST00000111016 3421 ntAPPRIS P1 TSL 1 (best) BASIC3.72□□□□□ -1.81
Trim40Q3UWA4 Olfr1058-202ENSMUST00000213998 1710 ntAPPRIS P1 TSL 5 BASIC3.72□□□□□ -1.81
Trim40Q3UWA4 Spata31d1c-201ENSMUST00000099427 3390 ntAPPRIS P1 TSL 1 (best) BASIC3.72□□□□□ -1.81
Trim40Q3UWA4 Gm20756-201ENSMUST00000201080 1595 ntTSL 1 (best) BASIC3.72□□□□□ -1.81
Trim40Q3UWA4 Olfr1469-202ENSMUST00000216910 4106 ntAPPRIS P1 TSL 5 BASIC3.72□□□□□ -1.81
Trim40Q3UWA4 Olfr1140-203ENSMUST00000217572 1327 ntAPPRIS P1 BASIC3.71□□□□□ -1.81
Trim40Q3UWA4 Olfr577-202ENSMUST00000214080 3282 ntAPPRIS P1 TSL 5 BASIC3.71□□□□□ -1.81
Trim40Q3UWA4 Gm14062-201ENSMUST00000134795 4134 ntTSL 1 (best) BASIC3.71□□□□□ -1.82
Trim40Q3UWA4 Gm37916-201ENSMUST00000192153 2435 ntBASIC3.71□□□□□ -1.82
Trim40Q3UWA4 Gm37298-201ENSMUST00000193770 3868 ntBASIC3.71□□□□□ -1.82
Trim40Q3UWA4 Gm37802-201ENSMUST00000194998 2643 ntBASIC3.71□□□□□ -1.82
Trim40Q3UWA4 Gm4736-201ENSMUST00000100870 380 ntBASIC3.71□□□□□ -1.82
Trim40Q3UWA4 Igkv3-7-201ENSMUST00000103399 299 ntAPPRIS P1 BASIC3.71□□□□□ -1.82
Trim40Q3UWA4 Gm24788-201ENSMUST00000104283 156 ntBASIC3.71□□□□□ -1.82
Trim40Q3UWA4 Gm24318-201ENSMUST00000104490 131 ntBASIC3.71□□□□□ -1.82
Trim40Q3UWA4 Gm14050-201ENSMUST00000117052 346 ntBASIC3.71□□□□□ -1.82
Trim40Q3UWA4 Klrd1-203ENSMUST00000119520 919 ntAPPRIS ALT2 TSL 5 BASIC3.71□□□□□ -1.82
Trim40Q3UWA4 Gm12685-201ENSMUST00000121702 214 ntBASIC3.71□□□□□ -1.82
Trim40Q3UWA4 Gm9003-201ENSMUST00000121810 482 ntBASIC3.71□□□□□ -1.82
Trim40Q3UWA4 Gm14916-201ENSMUST00000121904 204 ntBASIC3.71□□□□□ -1.82
Trim40Q3UWA4 Gm22345-201ENSMUST00000122644 107 ntBASIC3.71□□□□□ -1.82
Trim40Q3UWA4 Gm12708-201ENSMUST00000126143 349 ntTSL 5 BASIC3.71□□□□□ -1.82
Trim40Q3UWA4 Gm16068-201ENSMUST00000136557 504 ntTSL 3 BASIC3.71□□□□□ -1.82
Trim40Q3UWA4 Gm12762-201ENSMUST00000140881 483 ntTSL 2 BASIC3.71□□□□□ -1.82
Trim40Q3UWA4 AI847159-204ENSMUST00000148997 753 ntTSL 3 BASIC3.71□□□□□ -1.82
Trim40Q3UWA4 Gm23591-201ENSMUST00000157663 286 ntBASIC3.71□□□□□ -1.82
Trim40Q3UWA4 Serpina3l-ps-201ENSMUST00000163975 1264 ntBASIC3.71□□□□□ -1.82
Trim40Q3UWA4 Gm5277-201ENSMUST00000164923 556 ntBASIC3.71□□□□□ -1.82
Trim40Q3UWA4 Gm20468-201ENSMUST00000172664 452 ntTSL 3 BASIC3.71□□□□□ -1.82
Trim40Q3UWA4 Gm24811-201ENSMUST00000175313 100 ntBASIC3.71□□□□□ -1.82
Trim40Q3UWA4 Gm20674-201ENSMUST00000177452 369 ntBASIC3.71□□□□□ -1.82
Trim40Q3UWA4 Ear1-202ENSMUST00000179200 519 ntAPPRIS P1 TSL 1 (best) BASIC3.71□□□□□ -1.82
Trim40Q3UWA4 Olr1-204ENSMUST00000183258 468 ntAPPRIS ALT2 TSL 1 (best) BASIC3.71□□□□□ -1.82
Trim40Q3UWA4 Gm27201-201ENSMUST00000183818 416 ntTSL 3 BASIC3.71□□□□□ -1.82
Trim40Q3UWA4 Gm27522-201ENSMUST00000183949 230 ntBASIC3.71□□□□□ -1.82
Trim40Q3UWA4 Gm27387-201ENSMUST00000184583 116 ntBASIC3.71□□□□□ -1.82
Trim40Q3UWA4 Gm29460-201ENSMUST00000188607 714 ntBASIC3.71□□□□□ -1.82
Trim40Q3UWA4 Gm38201-201ENSMUST00000192143 387 ntBASIC3.71□□□□□ -1.82
Trim40Q3UWA4 Gm37853-201ENSMUST00000195748 660 ntTSL 3 BASIC3.71□□□□□ -1.82
Trim40Q3UWA4 Gm30275-202ENSMUST00000198124 416 ntTSL 3 BASIC3.71□□□□□ -1.82
Trim40Q3UWA4 Gm43228-201ENSMUST00000200735 264 ntBASIC3.71□□□□□ -1.82
Trim40Q3UWA4 Gm43659-201ENSMUST00000200894 628 ntBASIC3.71□□□□□ -1.82
Trim40Q3UWA4 Gm40293-201ENSMUST00000202596 485 ntTSL 3 BASIC3.71□□□□□ -1.82
Trim40Q3UWA4 2200007N16Rik-201ENSMUST00000206367 238 ntBASIC3.71□□□□□ -1.82
Trim40Q3UWA4 Olfr500-ps1-201ENSMUST00000208818 933 ntBASIC3.71□□□□□ -1.82
Trim40Q3UWA4 AL929265.1-201ENSMUST00000213427 125 ntBASIC3.71□□□□□ -1.82
Trim40Q3UWA4 Gm34113-201ENSMUST00000213796 388 ntTSL 2 BASIC3.71□□□□□ -1.82
Trim40Q3UWA4 Rpl29-ps2-203ENSMUST00000222043 1036 ntTSL 5 BASIC3.71□□□□□ -1.82
Trim40Q3UWA4 AC119241.1-201ENSMUST00000223651 534 ntBASIC3.71□□□□□ -1.82
Trim40Q3UWA4 CT010511.1-201ENSMUST00000224570 315 ntBASIC3.71□□□□□ -1.82
Trim40Q3UWA4 CT030684.2-201ENSMUST00000228946 826 ntBASIC3.71□□□□□ -1.82
Trim40Q3UWA4 Defb1-201ENSMUST00000051017 872 ntAPPRIS P1 TSL 1 (best) BASIC3.71□□□□□ -1.82
Trim40Q3UWA4 Olfr1013-201ENSMUST00000065626 918 ntAPPRIS P1 BASIC3.71□□□□□ -1.82
Trim40Q3UWA4 Olfr357-201ENSMUST00000069578 1092 ntAPPRIS P1 BASIC3.71□□□□□ -1.82
Trim40Q3UWA4 Olfr1014-201ENSMUST00000076250 918 ntAPPRIS P1 BASIC3.71□□□□□ -1.82
Trim40Q3UWA4 n-R5s7-201ENSMUST00000083755 121 ntBASIC3.71□□□□□ -1.82
Trim40Q3UWA4 Spink11-201ENSMUST00000097587 746 ntAPPRIS P1 TSL 1 (best) BASIC3.71□□□□□ -1.82
Trim40Q3UWA4 Olfr1154-201ENSMUST00000099844 933 ntAPPRIS P1 BASIC3.71□□□□□ -1.82
Trim40Q3UWA4 Vmn2r82-201ENSMUST00000170596 3045 ntAPPRIS P1 TSL 5 BASIC3.71□□□□□ -1.82
Trim40Q3UWA4 4932431L22Rik-201ENSMUST00000193456 3140 ntBASIC3.71□□□□□ -1.82
Trim40Q3UWA4 Gm14308-203ENSMUST00000119149 1458 ntTSL 1 (best) BASIC3.71□□□□□ -1.82
Trim40Q3UWA4 Gm14434-202ENSMUST00000120959 1458 ntTSL 1 (best) BASIC3.71□□□□□ -1.82
Trim40Q3UWA4 AC123035.1-201ENSMUST00000213846 2671 ntTSL 5 BASIC3.71□□□□□ -1.82
Trim40Q3UWA4 Olfr186-202ENSMUST00000206463 2208 ntAPPRIS P1 TSL 3 BASIC3.71□□□□□ -1.82
Trim40Q3UWA4 Zmym2-201ENSMUST00000022511 6974 ntAPPRIS P1 TSL 1 (best) BASIC3.71□□□□□ -1.82
Trim40Q3UWA4 Olfr1242-203ENSMUST00000143935 2406 ntAPPRIS P1 TSL 5 BASIC3.71□□□□□ -1.82
Trim40Q3UWA4 Olfr1274-ps-202ENSMUST00000216111 3395 ntAPPRIS P1 TSL 5 BASIC3.71□□□□□ -1.82
Trim40Q3UWA4 Gm14406-202ENSMUST00000108945 1348 ntAPPRIS P1 TSL 3 BASIC3.7□□□□□ -1.82
Trim40Q3UWA4 Adam26a-201ENSMUST00000049577 2489 ntAPPRIS P1 TSL 1 (best) BASIC3.7□□□□□ -1.82
Trim40Q3UWA4 AC155830.1-201ENSMUST00000220050 3836 ntBASIC3.7□□□□□ -1.82
Trim40Q3UWA4 Calcrl-202ENSMUST00000099944 3973 ntAPPRIS P1 TSL 1 (best) BASIC3.7□□□□□ -1.82
Trim40Q3UWA4 Cfh-206ENSMUST00000192880 3746 ntTSL 5 BASIC3.7□□□□□ -1.82
Trim40Q3UWA4 Gm26367-201ENSMUST00000104165 132 ntBASIC3.7□□□□□ -1.82
Trim40Q3UWA4 Tmco2-201ENSMUST00000106268 719 ntAPPRIS P1 TSL 1 (best) BASIC3.7□□□□□ -1.82
Trim40Q3UWA4 Gm2348-201ENSMUST00000108782 300 ntBASIC3.7□□□□□ -1.82
Trim40Q3UWA4 Gm16089-201ENSMUST00000117679 336 ntBASIC3.7□□□□□ -1.82
Trim40Q3UWA4 Klrc2-203ENSMUST00000118401 707 ntAPPRIS ALT2 TSL 1 (best) BASIC3.7□□□□□ -1.82
Trim40Q3UWA4 Vmn1r-ps100-201ENSMUST00000120610 867 ntBASIC3.7□□□□□ -1.82
Trim40Q3UWA4 Gm14162-201ENSMUST00000121985 601 ntBASIC3.7□□□□□ -1.82
Trim40Q3UWA4 Gm15735-201ENSMUST00000136187 514 ntTSL 3 BASIC3.7□□□□□ -1.82
Trim40Q3UWA4 Gm13194-201ENSMUST00000142299 311 ntBASIC3.7□□□□□ -1.82
Trim40Q3UWA4 Gm24739-201ENSMUST00000158855 292 ntBASIC3.7□□□□□ -1.82
Trim40Q3UWA4 Gm15796-201ENSMUST00000162135 204 ntBASIC3.7□□□□□ -1.82
Trim40Q3UWA4 Vmn1r-ps52-201ENSMUST00000177426 862 ntBASIC3.7□□□□□ -1.82
Trim40Q3UWA4 Mrgprb1-202ENSMUST00000188095 472 ntTSL 3 BASIC3.7□□□□□ -1.82
Trim40Q3UWA4 Gm38149-201ENSMUST00000191943 339 ntBASIC3.7□□□□□ -1.82
Trim40Q3UWA4 Gm37947-201ENSMUST00000192740 894 ntTSL 5 BASIC3.7□□□□□ -1.82
Trim40Q3UWA4 Gm32950-201ENSMUST00000193336 232 ntTSL 1 (best) BASIC3.7□□□□□ -1.82
Trim40Q3UWA4 Gm42919-201ENSMUST00000197753 1284 ntBASIC3.7□□□□□ -1.82
Trim40Q3UWA4 Clec2f-202ENSMUST00000204981 657 ntTSL 1 (best) BASIC3.7□□□□□ -1.82
Trim40Q3UWA4 Gm45690-201ENSMUST00000210775 246 ntBASIC3.7□□□□□ -1.82
Trim40Q3UWA4 Olfr337-ps1-202ENSMUST00000213375 526 ntBASIC3.7□□□□□ -1.82
Trim40Q3UWA4 Olfr1266-ps1-201ENSMUST00000214850 180 ntBASIC3.7□□□□□ -1.82
Trim40Q3UWA4 Gm46234-201ENSMUST00000218702 259 ntBASIC3.7□□□□□ -1.82
Trim40Q3UWA4 AC121286.1-201ENSMUST00000218811 380 ntTSL 3 BASIC3.7□□□□□ -1.82
Trim40Q3UWA4 4930555G07Rik-202ENSMUST00000219879 750 ntTSL 1 (best) BASIC3.7□□□□□ -1.82
Trim40Q3UWA4 Gm45965-201ENSMUST00000221192 1284 ntBASIC3.7□□□□□ -1.82
Retrieved 100 of 76,532 protein–RNA pairs in 82.1 ms