Protein–RNA interactions for Protein: Q3UJV1

Ccdc61, Coiled-coil domain-containing protein 61, mousemouse

Predictions only

Length 511 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc61Q3UJV1 Zmynd11-201ENSMUST00000062658 3796 ntTSL 1 (best) BASIC6.14□□□□□ -1.43
Ccdc61Q3UJV1 Olfr705-203ENSMUST00000216009 3085 ntAPPRIS P1 TSL 5 BASIC6.14□□□□□ -1.43
Ccdc61Q3UJV1 Gm10310-202ENSMUST00000213667 4661 ntAPPRIS P5 TSL 5 BASIC6.14□□□□□ -1.43
Ccdc61Q3UJV1 Zfp970-202ENSMUST00000108952 1569 ntAPPRIS P1 TSL 2 BASIC6.14□□□□□ -1.43
Ccdc61Q3UJV1 Gm20756-202ENSMUST00000201324 1565 ntTSL 1 (best) BASIC6.14□□□□□ -1.43
Ccdc61Q3UJV1 Gm44440-201ENSMUST00000203139 2373 ntBASIC6.14□□□□□ -1.43
Ccdc61Q3UJV1 Il22ra2-201ENSMUST00000036564 2498 ntAPPRIS P1 TSL 1 (best) BASIC6.14□□□□□ -1.43
Ccdc61Q3UJV1 Zdhhc17-201ENSMUST00000041723 4548 ntAPPRIS P1 TSL 1 (best) BASIC6.13□□□□□ -1.43
Ccdc61Q3UJV1 Igsf10-203ENSMUST00000194546 8393 ntAPPRIS P1 TSL 5 BASIC6.13□□□□□ -1.43
Ccdc61Q3UJV1 Mgam2-ps-201ENSMUST00000195870 3745 ntBASIC6.13□□□□□ -1.43
Ccdc61Q3UJV1 AC133079.1-201ENSMUST00000220943 1881 ntBASIC6.13□□□□□ -1.43
Ccdc61Q3UJV1 Akap4-203ENSMUST00000115751 2838 ntAPPRIS ALT2 TSL 1 (best) BASIC6.13□□□□□ -1.43
Ccdc61Q3UJV1 Olfr537-ps1-202ENSMUST00000210949 2821 ntAPPRIS P1 TSL 3 BASIC6.13□□□□□ -1.43
Ccdc61Q3UJV1 BC002059-202ENSMUST00000190415 1964 ntTSL 2 BASIC6.13□□□□□ -1.43
Ccdc61Q3UJV1 Fbxl13-202ENSMUST00000115234 2143 ntTSL 5 BASIC6.13□□□□□ -1.43
Ccdc61Q3UJV1 Pja2-201ENSMUST00000024888 4531 ntAPPRIS P4 TSL 5 BASIC6.13□□□□□ -1.43
Ccdc61Q3UJV1 Platr25-204ENSMUST00000221996 2458 ntAPPRIS ALT2 TSL 2 BASIC6.13□□□□□ -1.43
Ccdc61Q3UJV1 Igkv10-96-201ENSMUST00000103328 359 ntAPPRIS P1 BASIC6.13□□□□□ -1.43
Ccdc61Q3UJV1 Gm15660-201ENSMUST00000118997 478 ntBASIC6.13□□□□□ -1.43
Ccdc61Q3UJV1 Gm12156-201ENSMUST00000119188 554 ntBASIC6.13□□□□□ -1.43
Ccdc61Q3UJV1 Gm11415-201ENSMUST00000128214 480 ntTSL 1 (best) BASIC6.13□□□□□ -1.43
Ccdc61Q3UJV1 Gm16125-201ENSMUST00000159003 339 ntBASIC6.13□□□□□ -1.43
Ccdc61Q3UJV1 Gm27410-201ENSMUST00000183851 115 ntBASIC6.13□□□□□ -1.43
Ccdc61Q3UJV1 Mir7008-201ENSMUST00000184398 63 ntBASIC6.13□□□□□ -1.43
Ccdc61Q3UJV1 Gm29012-201ENSMUST00000187882 469 ntTSL 3 BASIC6.13□□□□□ -1.43
Ccdc61Q3UJV1 Gm28640-201ENSMUST00000190918 550 ntBASIC6.13□□□□□ -1.43
Ccdc61Q3UJV1 Gm10030-203ENSMUST00000197321 3824 ntTSL 1 (best) BASIC6.13□□□□□ -1.43
Ccdc61Q3UJV1 Mir6906-201ENSMUST00000198998 58 ntBASIC6.13□□□□□ -1.43
Ccdc61Q3UJV1 Gm32754-201ENSMUST00000199442 257 ntTSL 5 BASIC6.13□□□□□ -1.43
Ccdc61Q3UJV1 Gm43812-201ENSMUST00000200976 581 ntTSL 5 BASIC6.13□□□□□ -1.43
Ccdc61Q3UJV1 Gm35931-201ENSMUST00000203931 448 ntBASIC6.13□□□□□ -1.43
Ccdc61Q3UJV1 Gm44157-201ENSMUST00000204720 410 ntBASIC6.13□□□□□ -1.43
Ccdc61Q3UJV1 Gm30034-201ENSMUST00000219589 248 ntTSL 5 BASIC6.13□□□□□ -1.43
Ccdc61Q3UJV1 AL669819.1-201ENSMUST00000225143 330 ntBASIC6.13□□□□□ -1.43
Ccdc61Q3UJV1 Olfr945-201ENSMUST00000076903 963 ntAPPRIS P2 BASIC6.13□□□□□ -1.43
Ccdc61Q3UJV1 Mir331-201ENSMUST00000083673 96 ntBASIC6.13□□□□□ -1.43
Ccdc61Q3UJV1 Acsm3-203ENSMUST00000106527 2557 ntAPPRIS P1 TSL 1 (best) BASIC6.13□□□□□ -1.43
Ccdc61Q3UJV1 Dnajc13-203ENSMUST00000186788 6747 ntTSL 1 (best) BASIC6.13□□□□□ -1.43
Ccdc61Q3UJV1 Zzz3-201ENSMUST00000089982 4197 ntAPPRIS ALT2 TSL 1 (best) BASIC6.13□□□□□ -1.43
Ccdc61Q3UJV1 Foxp2-201ENSMUST00000031545 5647 ntAPPRIS P3 TSL 1 (best) BASIC6.13□□□□□ -1.43
Ccdc61Q3UJV1 Pirt-201ENSMUST00000123434 4200 ntAPPRIS P1 TSL 1 (best) BASIC6.13□□□□□ -1.43
Ccdc61Q3UJV1 Olfr1176-202ENSMUST00000213778 2823 ntAPPRIS P1 TSL 5 BASIC6.13□□□□□ -1.43
Ccdc61Q3UJV1 Gm15088-201ENSMUST00000117973 1508 ntBASIC6.13□□□□□ -1.43
Ccdc61Q3UJV1 Gm15098-201ENSMUST00000119036 1508 ntBASIC6.13□□□□□ -1.43
Ccdc61Q3UJV1 Gm14324-201ENSMUST00000121358 3051 ntBASIC6.13□□□□□ -1.43
Ccdc61Q3UJV1 B530045E10Rik-202ENSMUST00000189035 3138 ntTSL 1 (best) BASIC6.13□□□□□ -1.43
Ccdc61Q3UJV1 4932416K20Rik-201ENSMUST00000093229 3554 ntBASIC6.13□□□□□ -1.43
Ccdc61Q3UJV1 Gm37930-201ENSMUST00000194308 1886 ntBASIC6.13□□□□□ -1.43
Ccdc61Q3UJV1 Gm10436-201ENSMUST00000071580 1883 ntAPPRIS P2 TSL 1 (best) BASIC6.13□□□□□ -1.43
Ccdc61Q3UJV1 Vmn1r79-202ENSMUST00000226953 5636 ntAPPRIS P1 BASIC6.12□□□□□ -1.43
Ccdc61Q3UJV1 4732416N19Rik-201ENSMUST00000203932 3479 ntBASIC6.12□□□□□ -1.43
Ccdc61Q3UJV1 Rap2c-201ENSMUST00000053593 3545 ntAPPRIS P1 TSL 1 (best) BASIC6.12□□□□□ -1.43
Ccdc61Q3UJV1 Slc12a6-203ENSMUST00000110987 3722 ntTSL 1 (best) BASIC6.12□□□□□ -1.43
Ccdc61Q3UJV1 Prg4-206ENSMUST00000161611 3821 ntAPPRIS P1 TSL 5 BASIC6.12□□□□□ -1.43
Ccdc61Q3UJV1 Fchsd2-202ENSMUST00000098250 4316 ntAPPRIS P1 TSL 1 (best) BASIC6.12□□□□□ -1.43
Ccdc61Q3UJV1 Pcdh15-201ENSMUST00000064562 8830 ntTSL 5 BASIC6.12□□□□□ -1.43
Ccdc61Q3UJV1 Usp29-203ENSMUST00000198068 4420 ntAPPRIS P1 TSL 5 BASIC6.12□□□□□ -1.43
Ccdc61Q3UJV1 Gm6760-201ENSMUST00000114682 604 ntAPPRIS P1 TSL 1 (best) BASIC6.12□□□□□ -1.43
Ccdc61Q3UJV1 Gm16423-201ENSMUST00000120078 947 ntBASIC6.12□□□□□ -1.43
Ccdc61Q3UJV1 Gm12482-201ENSMUST00000120435 630 ntBASIC6.12□□□□□ -1.43
Ccdc61Q3UJV1 Gm12486-201ENSMUST00000120887 541 ntBASIC6.12□□□□□ -1.43
Ccdc61Q3UJV1 Gm14808-201ENSMUST00000129259 361 ntTSL 3 BASIC6.12□□□□□ -1.43
Ccdc61Q3UJV1 Gm11680-201ENSMUST00000146550 439 ntTSL 5 BASIC6.12□□□□□ -1.43
Ccdc61Q3UJV1 Gm23120-201ENSMUST00000157654 287 ntBASIC6.12□□□□□ -1.43
Ccdc61Q3UJV1 Gm24858-201ENSMUST00000158058 323 ntBASIC6.12□□□□□ -1.43
Ccdc61Q3UJV1 Gm5935-202ENSMUST00000178986 639 ntAPPRIS P1 TSL 5 BASIC6.12□□□□□ -1.43
Ccdc61Q3UJV1 Gm26189-201ENSMUST00000179879 107 ntBASIC6.12□□□□□ -1.43
Ccdc61Q3UJV1 Pou6f2-206ENSMUST00000184299 793 ntAPPRIS P1 TSL 1 (best) BASIC6.12□□□□□ -1.43
Ccdc61Q3UJV1 Trav6-4-202ENSMUST00000184650 338 ntAPPRIS ALT2 BASIC6.12□□□□□ -1.43
Ccdc61Q3UJV1 Trav17-202ENSMUST00000186545 338 ntAPPRIS ALT2 BASIC6.12□□□□□ -1.43
Ccdc61Q3UJV1 Ly6e-215ENSMUST00000191436 1122 ntAPPRIS P1 TSL 1 (best) BASIC6.12□□□□□ -1.43
Ccdc61Q3UJV1 Gm18384-201ENSMUST00000195974 808 ntBASIC6.12□□□□□ -1.43
Ccdc61Q3UJV1 Gm36831-201ENSMUST00000196485 631 ntTSL 2 BASIC6.12□□□□□ -1.43
Ccdc61Q3UJV1 Gm6260-202ENSMUST00000197170 921 ntTSL 1 (best) BASIC6.12□□□□□ -1.43
Ccdc61Q3UJV1 Gm44193-201ENSMUST00000204822 2523 ntBASIC6.12□□□□□ -1.43
Ccdc61Q3UJV1 Gm44894-201ENSMUST00000205280 2174 ntBASIC6.12□□□□□ -1.43
Ccdc61Q3UJV1 Olfr505-ps1-201ENSMUST00000207626 976 ntBASIC6.12□□□□□ -1.43
Ccdc61Q3UJV1 Olfr203-202ENSMUST00000215893 1521 ntAPPRIS P1 TSL 5 BASIC6.12□□□□□ -1.43
Ccdc61Q3UJV1 AC160635.2-201ENSMUST00000216368 734 ntTSL 5 BASIC6.12□□□□□ -1.43
Ccdc61Q3UJV1 Gm29884-201ENSMUST00000218403 453 ntBASIC6.12□□□□□ -1.43
Ccdc61Q3UJV1 Gm7042-201ENSMUST00000223027 384 ntBASIC6.12□□□□□ -1.43
Ccdc61Q3UJV1 AC164297.2-201ENSMUST00000224388 1508 ntBASIC6.12□□□□□ -1.43
Ccdc61Q3UJV1 AC167013.5-201ENSMUST00000227597 2947 ntBASIC6.12□□□□□ -1.43
Ccdc61Q3UJV1 Olfr365-201ENSMUST00000074168 939 ntAPPRIS P1 BASIC6.12□□□□□ -1.43
Ccdc61Q3UJV1 Rabgap1-203ENSMUST00000112920 4847 ntAPPRIS P4 TSL 5 BASIC6.12□□□□□ -1.43
Ccdc61Q3UJV1 Gm45413-201ENSMUST00000210389 3538 ntBASIC6.12□□□□□ -1.43
Ccdc61Q3UJV1 Gm37833-201ENSMUST00000194342 3256 ntBASIC6.12□□□□□ -1.43
Ccdc61Q3UJV1 Olfr1057-202ENSMUST00000217435 3249 ntAPPRIS P1 TSL 5 BASIC6.12□□□□□ -1.43
Ccdc61Q3UJV1 Gm17056-201ENSMUST00000164804 2299 ntTSL 1 (best) BASIC6.11□□□□□ -1.43
Ccdc61Q3UJV1 Gm9077-201ENSMUST00000210657 2298 ntBASIC6.11□□□□□ -1.43
Ccdc61Q3UJV1 Atr-213ENSMUST00000215311 8102 ntAPPRIS P1 TSL 5 BASIC6.11□□□□□ -1.43
Ccdc61Q3UJV1 Olfr1155-202ENSMUST00000214641 2048 ntAPPRIS P1 TSL 5 BASIC6.11□□□□□ -1.43
Ccdc61Q3UJV1 Olfr922-202ENSMUST00000213164 4028 ntAPPRIS P1 TSL 5 BASIC6.11□□□□□ -1.43
Ccdc61Q3UJV1 Olfr542-ps1-202ENSMUST00000218525 4039 ntTSL 5 BASIC6.11□□□□□ -1.43
Ccdc61Q3UJV1 Gm14391-204ENSMUST00000109058 1854 ntAPPRIS P1 TSL 3 BASIC6.11□□□□□ -1.43
Ccdc61Q3UJV1 Lrrc49-201ENSMUST00000053171 3086 ntTSL 1 (best) BASIC6.11□□□□□ -1.43
Ccdc61Q3UJV1 Gm26514-201ENSMUST00000181087 4231 ntTSL 1 (best) BASIC6.11□□□□□ -1.43
Ccdc61Q3UJV1 Clock-204ENSMUST00000202122 5508 ntAPPRIS ALT2 TSL 1 (best) BASIC6.11□□□□□ -1.43
Ccdc61Q3UJV1 Vmn1r6-206ENSMUST00000227847 8073 ntAPPRIS P2 BASIC6.11□□□□□ -1.43
Ccdc61Q3UJV1 Gm24886-201ENSMUST00000104384 123 ntBASIC6.11□□□□□ -1.43
Retrieved 100 of 76,532 protein–RNA pairs in 77.4 ms