Protein–RNA interactions for Protein: Q3UDK1

Trafd1, TRAF-type zinc finger domain-containing protein 1, mousemouse

Predictions only

Length 580 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trafd1Q3UDK1 Gm43958-201ENSMUST00000204360 3544 ntBASIC3.73□□□□□ -1.81
Trafd1Q3UDK1 Ghr-208ENSMUST00000161561 2749 ntAPPRIS P1 TSL 1 (best) BASIC3.72□□□□□ -1.81
Trafd1Q3UDK1 Pik3c2a-201ENSMUST00000170430 8044 ntAPPRIS P1 TSL 5 BASIC3.72□□□□□ -1.81
Trafd1Q3UDK1 Kctd12b-201ENSMUST00000039424 4795 ntAPPRIS P1 TSL 1 (best) BASIC3.72□□□□□ -1.81
Trafd1Q3UDK1 Olfr105-ps-202ENSMUST00000215518 3778 ntAPPRIS P1 TSL 5 BASIC3.72□□□□□ -1.81
Trafd1Q3UDK1 Gm5447-201ENSMUST00000070258 1773 ntAPPRIS P1 BASIC3.72□□□□□ -1.81
Trafd1Q3UDK1 Gm26418-201ENSMUST00000104275 137 ntBASIC3.72□□□□□ -1.81
Trafd1Q3UDK1 Mier1-203ENSMUST00000106855 1079 ntAPPRIS ALT2 TSL 1 (best) BASIC3.72□□□□□ -1.81
Trafd1Q3UDK1 Gm14299-201ENSMUST00000117586 397 ntBASIC3.72□□□□□ -1.81
Trafd1Q3UDK1 Gm12788-201ENSMUST00000119090 308 ntBASIC3.72□□□□□ -1.81
Trafd1Q3UDK1 Vmn1r-ps109-201ENSMUST00000119308 725 ntBASIC3.72□□□□□ -1.81
Trafd1Q3UDK1 Gm12873-201ENSMUST00000119988 422 ntBASIC3.72□□□□□ -1.81
Trafd1Q3UDK1 Gm11479-201ENSMUST00000134275 387 ntTSL 1 (best) BASIC3.72□□□□□ -1.81
Trafd1Q3UDK1 Gm13092-201ENSMUST00000136346 260 ntBASIC3.72□□□□□ -1.81
Trafd1Q3UDK1 Gm26148-201ENSMUST00000157430 68 ntBASIC3.72□□□□□ -1.81
Trafd1Q3UDK1 Gm23257-201ENSMUST00000158322 132 ntBASIC3.72□□□□□ -1.81
Trafd1Q3UDK1 Gm24739-201ENSMUST00000158855 292 ntBASIC3.72□□□□□ -1.81
Trafd1Q3UDK1 Gm17727-201ENSMUST00000171898 643 ntAPPRIS P1 TSL 5 BASIC3.72□□□□□ -1.81
Trafd1Q3UDK1 Gm20476-201ENSMUST00000172644 492 ntTSL 2 BASIC3.72□□□□□ -1.81
Trafd1Q3UDK1 Vmn1r-ps56-201ENSMUST00000172769 965 ntBASIC3.72□□□□□ -1.81
Trafd1Q3UDK1 Gm18522-201ENSMUST00000173947 650 ntBASIC3.72□□□□□ -1.81
Trafd1Q3UDK1 Snord92-201ENSMUST00000175548 85 ntBASIC3.72□□□□□ -1.81
Trafd1Q3UDK1 Gm20693-201ENSMUST00000177431 211 ntBASIC3.72□□□□□ -1.81
Trafd1Q3UDK1 Gm26871-205ENSMUST00000181926 742 ntTSL 3 BASIC3.72□□□□□ -1.81
Trafd1Q3UDK1 Gm9947-202ENSMUST00000187401 687 ntTSL 5 BASIC3.72□□□□□ -1.81
Trafd1Q3UDK1 Gm38141-201ENSMUST00000192540 317 ntTSL 5 BASIC3.72□□□□□ -1.81
Trafd1Q3UDK1 Gm44300-201ENSMUST00000196792 121 ntBASIC3.72□□□□□ -1.81
Trafd1Q3UDK1 Gm18611-201ENSMUST00000200334 1118 ntBASIC3.72□□□□□ -1.81
Trafd1Q3UDK1 1700065L07Rik-201ENSMUST00000204961 614 ntTSL 1 (best) BASIC3.72□□□□□ -1.81
Trafd1Q3UDK1 Gm44995-201ENSMUST00000207056 504 ntTSL 3 BASIC3.72□□□□□ -1.81
Trafd1Q3UDK1 Cyp3a61-ps1-201ENSMUST00000218470 592 ntBASIC3.72□□□□□ -1.81
Trafd1Q3UDK1 Fkbp1b-202ENSMUST00000219880 246 ntTSL 1 (best) BASIC3.72□□□□□ -1.81
Trafd1Q3UDK1 AC118006.1-201ENSMUST00000224211 501 ntBASIC3.72□□□□□ -1.81
Trafd1Q3UDK1 Olfr502-201ENSMUST00000078933 1059 ntAPPRIS P1 BASIC3.72□□□□□ -1.81
Trafd1Q3UDK1 Mir132-201ENSMUST00000083603 66 ntBASIC3.72□□□□□ -1.81
Trafd1Q3UDK1 Olfr833-ps1-201ENSMUST00000086493 913 ntBASIC3.72□□□□□ -1.81
Trafd1Q3UDK1 Rpl32-ps-201ENSMUST00000091052 506 ntBASIC3.72□□□□□ -1.81
Trafd1Q3UDK1 Olfr1290-201ENSMUST00000099616 939 ntAPPRIS P1 BASIC3.72□□□□□ -1.81
Trafd1Q3UDK1 Gm10801-201ENSMUST00000099684 504 ntAPPRIS P1 TSL 5 BASIC3.72□□□□□ -1.81
Trafd1Q3UDK1 Olfr1183-203ENSMUST00000219871 8353 ntAPPRIS P1 TSL 5 BASIC3.72□□□□□ -1.81
Trafd1Q3UDK1 Vmn1r80-202ENSMUST00000227205 10892 ntAPPRIS P1 BASIC3.72□□□□□ -1.81
Trafd1Q3UDK1 Zfp951-201ENSMUST00000089906 1356 ntAPPRIS ALT2 TSL 5 BASIC3.72□□□□□ -1.81
Trafd1Q3UDK1 AC164102.1-201ENSMUST00000220524 1553 ntBASIC3.72□□□□□ -1.81
Trafd1Q3UDK1 Gm36962-201ENSMUST00000192114 1761 ntBASIC3.71□□□□□ -1.81
Trafd1Q3UDK1 Gm45792-201ENSMUST00000207795 4268 ntTSL 1 (best) BASIC3.71□□□□□ -1.82
Trafd1Q3UDK1 Gm38073-201ENSMUST00000195141 3665 ntBASIC3.71□□□□□ -1.82
Trafd1Q3UDK1 Olfr1446-203ENSMUST00000216805 2417 ntAPPRIS P1 TSL 3 BASIC3.71□□□□□ -1.82
Trafd1Q3UDK1 Gm3616-201ENSMUST00000174430 2514 ntBASIC3.71□□□□□ -1.82
Trafd1Q3UDK1 Gm3683-201ENSMUST00000175701 2513 ntBASIC3.71□□□□□ -1.82
Trafd1Q3UDK1 Fam122c-201ENSMUST00000114835 745 ntAPPRIS P1 TSL 1 (best) BASIC3.71□□□□□ -1.82
Trafd1Q3UDK1 Olfr475-ps1-201ENSMUST00000117982 932 ntAPPRIS P1 BASIC3.71□□□□□ -1.82
Trafd1Q3UDK1 Gm16383-201ENSMUST00000118122 232 ntBASIC3.71□□□□□ -1.82
Trafd1Q3UDK1 Gm24960-201ENSMUST00000157923 90 ntBASIC3.71□□□□□ -1.82
Trafd1Q3UDK1 Gm23112-201ENSMUST00000158606 125 ntBASIC3.71□□□□□ -1.82
Trafd1Q3UDK1 Gm16567-201ENSMUST00000160967 576 ntTSL 5 BASIC3.71□□□□□ -1.82
Trafd1Q3UDK1 Adgrg4-206ENSMUST00000168724 531 ntBASIC3.71□□□□□ -1.82
Trafd1Q3UDK1 Ap3m1-ps-201ENSMUST00000177652 1258 ntBASIC3.71□□□□□ -1.82
Trafd1Q3UDK1 Gm29320-201ENSMUST00000185235 615 ntBASIC3.71□□□□□ -1.82
Trafd1Q3UDK1 1700109I08Rik-201ENSMUST00000185680 396 ntTSL 1 (best) BASIC3.71□□□□□ -1.82
Trafd1Q3UDK1 Gm29179-202ENSMUST00000186138 615 ntBASIC3.71□□□□□ -1.82
Trafd1Q3UDK1 Gm29448-201ENSMUST00000186675 615 ntBASIC3.71□□□□□ -1.82
Trafd1Q3UDK1 Gm29314-201ENSMUST00000186800 615 ntBASIC3.71□□□□□ -1.82
Trafd1Q3UDK1 Gm28253-202ENSMUST00000187971 615 ntBASIC3.71□□□□□ -1.82
Trafd1Q3UDK1 Gm28191-201ENSMUST00000189112 211 ntBASIC3.71□□□□□ -1.82
Trafd1Q3UDK1 Gm29169-201ENSMUST00000189835 615 ntBASIC3.71□□□□□ -1.82
Trafd1Q3UDK1 Gm45659-201ENSMUST00000209295 564 ntTSL 2 BASIC3.71□□□□□ -1.82
Trafd1Q3UDK1 Gm3690-201ENSMUST00000211341 262 ntBASIC3.71□□□□□ -1.82
Trafd1Q3UDK1 AC167669.1-201ENSMUST00000224932 384 ntBASIC3.71□□□□□ -1.82
Trafd1Q3UDK1 AC134335.1-201ENSMUST00000227626 329 ntBASIC3.71□□□□□ -1.82
Trafd1Q3UDK1 Prl8a9-201ENSMUST00000006662 942 ntAPPRIS P1 TSL 1 (best) BASIC3.71□□□□□ -1.82
Trafd1Q3UDK1 Gm9964-201ENSMUST00000068448 728 ntAPPRIS P1 BASIC3.71□□□□□ -1.82
Trafd1Q3UDK1 Olfr811-201ENSMUST00000076437 960 ntAPPRIS P1 BASIC3.71□□□□□ -1.82
Trafd1Q3UDK1 4930512M02Rik-201ENSMUST00000081896 715 ntAPPRIS P1 TSL 1 (best) BASIC3.71□□□□□ -1.82
Trafd1Q3UDK1 Ang6-201ENSMUST00000096869 444 ntAPPRIS P1 BASIC3.71□□□□□ -1.82
Trafd1Q3UDK1 Gm37672-201ENSMUST00000192682 4014 ntBASIC3.71□□□□□ -1.82
Trafd1Q3UDK1 Rab27b-203ENSMUST00000121693 6891 ntAPPRIS P1 TSL 1 (best) BASIC3.71□□□□□ -1.82
Trafd1Q3UDK1 Vmn2r82-201ENSMUST00000170596 3045 ntAPPRIS P1 TSL 5 BASIC3.71□□□□□ -1.82
Trafd1Q3UDK1 Iigp1-201ENSMUST00000032473 3121 ntAPPRIS P1 TSL 3 BASIC3.71□□□□□ -1.82
Trafd1Q3UDK1 Gm336-201ENSMUST00000186376 1480 ntBASIC3.71□□□□□ -1.82
Trafd1Q3UDK1 Gm16294-201ENSMUST00000070382 1459 ntTSL 2 BASIC3.71□□□□□ -1.82
Trafd1Q3UDK1 Zfp518a-201ENSMUST00000050092 6840 ntAPPRIS P1 TSL 2 BASIC3.71□□□□□ -1.82
Trafd1Q3UDK1 Gm38212-201ENSMUST00000194081 2756 ntBASIC3.71□□□□□ -1.82
Trafd1Q3UDK1 Tbx22-201ENSMUST00000068451 2947 ntTSL 1 (best) BASIC3.71□□□□□ -1.82
Trafd1Q3UDK1 Olfr1270-206ENSMUST00000217139 4803 ntAPPRIS P1 TSL 5 BASIC3.7□□□□□ -1.82
Trafd1Q3UDK1 Olfr665-204ENSMUST00000216971 3248 ntAPPRIS P1 TSL 5 BASIC3.7□□□□□ -1.82
Trafd1Q3UDK1 AC149294.7-201ENSMUST00000227475 1432 ntBASIC3.7□□□□□ -1.82
Trafd1Q3UDK1 Gm24935-201ENSMUST00000103770 110 ntBASIC3.7□□□□□ -1.82
Trafd1Q3UDK1 Gm12880-201ENSMUST00000120652 494 ntBASIC3.7□□□□□ -1.82
Trafd1Q3UDK1 Gm3835-201ENSMUST00000120752 403 ntBASIC3.7□□□□□ -1.82
Trafd1Q3UDK1 Gm16373-201ENSMUST00000129517 303 ntBASIC3.7□□□□□ -1.82
Trafd1Q3UDK1 Gm14228-201ENSMUST00000131908 798 ntTSL 1 (best) BASIC3.7□□□□□ -1.82
Trafd1Q3UDK1 4931428L18Rik-202ENSMUST00000135245 889 ntAPPRIS P5 TSL 1 (best) BASIC3.7□□□□□ -1.82
Trafd1Q3UDK1 Far1os-201ENSMUST00000138253 893 ntTSL 1 (best) BASIC3.7□□□□□ -1.82
Trafd1Q3UDK1 Gm23824-201ENSMUST00000158741 276 ntBASIC3.7□□□□□ -1.82
Trafd1Q3UDK1 Gm17075-201ENSMUST00000171924 670 ntBASIC3.7□□□□□ -1.82
Trafd1Q3UDK1 Vmn2r-ps126-201ENSMUST00000176711 1149 ntBASIC3.7□□□□□ -1.82
Trafd1Q3UDK1 Gm24417-201ENSMUST00000178123 79 ntBASIC3.7□□□□□ -1.82
Trafd1Q3UDK1 Gm24653-201ENSMUST00000178541 79 ntBASIC3.7□□□□□ -1.82
Trafd1Q3UDK1 Gm25934-201ENSMUST00000178642 79 ntBASIC3.7□□□□□ -1.82
Trafd1Q3UDK1 Gm15099-201ENSMUST00000179833 573 ntTSL 5 BASIC3.7□□□□□ -1.82
Retrieved 100 of 76,532 protein–RNA pairs in 133.6 ms