Protein–RNA interactions for Protein: Q3UAW9

Brf2, Transcription factor IIIB 50 kDa subunit, mousemouse

Predictions only

Length 420 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Brf2Q3UAW9 Gm43975-201ENSMUST00000203023 481 ntBASIC4.06□□□□□ -1.76
Brf2Q3UAW9 AC154374.1-201ENSMUST00000215351 351 ntBASIC4.06□□□□□ -1.76
Brf2Q3UAW9 Gm18016-201ENSMUST00000216119 801 ntBASIC4.06□□□□□ -1.76
Brf2Q3UAW9 Olfr153-201ENSMUST00000217113 1258 ntAPPRIS P1 BASIC4.06□□□□□ -1.76
Brf2Q3UAW9 AC152951.1-201ENSMUST00000218907 266 ntBASIC4.06□□□□□ -1.76
Brf2Q3UAW9 Gm32300-201ENSMUST00000221735 515 ntBASIC4.06□□□□□ -1.76
Brf2Q3UAW9 Gm26571-203ENSMUST00000221865 555 ntTSL 2 BASIC4.06□□□□□ -1.76
Brf2Q3UAW9 AC102352.1-201ENSMUST00000224187 582 ntBASIC4.06□□□□□ -1.76
Brf2Q3UAW9 AC154506.3-201ENSMUST00000225417 213 ntBASIC4.06□□□□□ -1.76
Brf2Q3UAW9 CT025552.2-201ENSMUST00000225497 317 ntBASIC4.06□□□□□ -1.76
Brf2Q3UAW9 AC126253.2-201ENSMUST00000226518 205 ntBASIC4.06□□□□□ -1.76
Brf2Q3UAW9 Olfr727-201ENSMUST00000079142 1035 ntAPPRIS P1 BASIC4.06□□□□□ -1.76
Brf2Q3UAW9 Gm26121-201ENSMUST00000083364 162 ntBASIC4.06□□□□□ -1.76
Brf2Q3UAW9 Vmn1r132-201ENSMUST00000098736 894 ntAPPRIS P1 BASIC4.06□□□□□ -1.76
Brf2Q3UAW9 Olfr1098-201ENSMUST00000099872 948 ntAPPRIS P1 BASIC4.06□□□□□ -1.76
Brf2Q3UAW9 Olfr1040-201ENSMUST00000099909 942 ntAPPRIS P1 BASIC4.06□□□□□ -1.76
Brf2Q3UAW9 Gm43527-201ENSMUST00000198749 3178 ntBASIC4.06□□□□□ -1.76
Brf2Q3UAW9 Rps6ka3-204ENSMUST00000112493 3671 ntTSL 5 BASIC4.06□□□□□ -1.76
Brf2Q3UAW9 Cntn6-205ENSMUST00000162872 3467 ntAPPRIS P1 TSL 1 (best) BASIC4.06□□□□□ -1.76
Brf2Q3UAW9 Gm45792-201ENSMUST00000207795 4268 ntTSL 1 (best) BASIC4.06□□□□□ -1.76
Brf2Q3UAW9 Fam205c-202ENSMUST00000107978 1451 ntAPPRIS ALT2 TSL 1 (best) BASIC4.05□□□□□ -1.76
Brf2Q3UAW9 Gm43498-201ENSMUST00000202002 1486 ntBASIC4.05□□□□□ -1.76
Brf2Q3UAW9 Gm11284-201ENSMUST00000121910 1887 ntBASIC4.05□□□□□ -1.76
Brf2Q3UAW9 Gm14304-201ENSMUST00000117272 446 ntBASIC4.05□□□□□ -1.76
Brf2Q3UAW9 Gm16431-201ENSMUST00000117454 431 ntBASIC4.05□□□□□ -1.76
Brf2Q3UAW9 Gm11878-201ENSMUST00000117908 400 ntBASIC4.05□□□□□ -1.76
Brf2Q3UAW9 Gm13550-201ENSMUST00000118185 525 ntBASIC4.05□□□□□ -1.76
Brf2Q3UAW9 Vps29-203ENSMUST00000118765 713 ntTSL 3 BASIC4.05□□□□□ -1.76
Brf2Q3UAW9 Gm11262-201ENSMUST00000119326 833 ntBASIC4.05□□□□□ -1.76
Brf2Q3UAW9 Nectin3-204ENSMUST00000119941 529 ntTSL 3 BASIC4.05□□□□□ -1.76
Brf2Q3UAW9 Dnajc19-ps-201ENSMUST00000120890 351 ntBASIC4.05□□□□□ -1.76
Brf2Q3UAW9 Gm6591-201ENSMUST00000121063 434 ntBASIC4.05□□□□□ -1.76
Brf2Q3UAW9 Gm13973-201ENSMUST00000121371 894 ntBASIC4.05□□□□□ -1.76
Brf2Q3UAW9 Gm14408-202ENSMUST00000126726 279 ntAPPRIS P1 TSL 5 BASIC4.05□□□□□ -1.76
Brf2Q3UAW9 Gm14505-201ENSMUST00000145383 831 ntTSL 3 BASIC4.05□□□□□ -1.76
Brf2Q3UAW9 Cldn34-ps-201ENSMUST00000145498 600 ntBASIC4.05□□□□□ -1.76
Brf2Q3UAW9 Gm15226-201ENSMUST00000156526 2971 ntTSL 1 (best) BASIC4.05□□□□□ -1.76
Brf2Q3UAW9 Gm8221-201ENSMUST00000178052 564 ntBASIC4.05□□□□□ -1.76
Brf2Q3UAW9 Mir7056-201ENSMUST00000183776 59 ntBASIC4.05□□□□□ -1.76
Brf2Q3UAW9 Gm20897-201ENSMUST00000185240 923 ntAPPRIS P1 TSL 1 (best) BASIC4.05□□□□□ -1.76
Brf2Q3UAW9 Gm20883-201ENSMUST00000185245 922 ntAPPRIS P1 TSL 1 (best) BASIC4.05□□□□□ -1.76
Brf2Q3UAW9 Gm21117-202ENSMUST00000185327 925 ntAPPRIS P1 TSL 1 (best) BASIC4.05□□□□□ -1.76
Brf2Q3UAW9 Gm20916-202ENSMUST00000185338 923 ntAPPRIS P1 TSL 1 (best) BASIC4.05□□□□□ -1.76
Brf2Q3UAW9 Gm28897-201ENSMUST00000185340 923 ntAPPRIS P1 TSL 1 (best) BASIC4.05□□□□□ -1.76
Brf2Q3UAW9 Gm20736-202ENSMUST00000185550 923 ntAPPRIS P1 TSL 1 (best) BASIC4.05□□□□□ -1.76
Brf2Q3UAW9 Gm20835-201ENSMUST00000185565 923 ntAPPRIS P1 TSL 5 BASIC4.05□□□□□ -1.76
Brf2Q3UAW9 Gm29564-201ENSMUST00000185575 923 ntAPPRIS P1 TSL 1 (best) BASIC4.05□□□□□ -1.76
Brf2Q3UAW9 Gm29299-201ENSMUST00000185609 923 ntBASIC4.05□□□□□ -1.76
Brf2Q3UAW9 Gm21317-201ENSMUST00000185636 923 ntAPPRIS P1 TSL 1 (best) BASIC4.05□□□□□ -1.76
Brf2Q3UAW9 Gm21095-202ENSMUST00000185776 923 ntAPPRIS P1 TSL 1 (best) BASIC4.05□□□□□ -1.76
Brf2Q3UAW9 Gm28553-201ENSMUST00000185924 923 ntAPPRIS P1 TSL 1 (best) BASIC4.05□□□□□ -1.76
Brf2Q3UAW9 Gm20908-201ENSMUST00000186004 922 ntAPPRIS P1 TSL 1 (best) BASIC4.05□□□□□ -1.76
Brf2Q3UAW9 Gm20906-201ENSMUST00000186493 923 ntAPPRIS P1 TSL 1 (best) BASIC4.05□□□□□ -1.76
Brf2Q3UAW9 Gm20929-201ENSMUST00000186578 923 ntAPPRIS P1 TSL 1 (best) BASIC4.05□□□□□ -1.76
Brf2Q3UAW9 Gm20824-201ENSMUST00000186739 919 ntAPPRIS P1 TSL 1 (best) BASIC4.05□□□□□ -1.76
Brf2Q3UAW9 Gm21518-202ENSMUST00000186938 922 ntAPPRIS P1 TSL 1 (best) BASIC4.05□□□□□ -1.76
Brf2Q3UAW9 Gm20855-202ENSMUST00000186996 924 ntAPPRIS P1 TSL 1 (best) BASIC4.05□□□□□ -1.76
Brf2Q3UAW9 Gm20911-201ENSMUST00000187135 924 ntAPPRIS P1 TSL 1 (best) BASIC4.05□□□□□ -1.76
Brf2Q3UAW9 Gm28102-201ENSMUST00000187146 924 ntAPPRIS P1 TSL 1 (best) BASIC4.05□□□□□ -1.76
Brf2Q3UAW9 Gm28827-201ENSMUST00000187165 923 ntAPPRIS P1 TSL 1 (best) BASIC4.05□□□□□ -1.76
Brf2Q3UAW9 Gm20931-202ENSMUST00000187293 922 ntAPPRIS P1 TSL 1 (best) BASIC4.05□□□□□ -1.76
Brf2Q3UAW9 Gm18505-201ENSMUST00000187360 790 ntBASIC4.05□□□□□ -1.76
Brf2Q3UAW9 Gm21760-202ENSMUST00000187433 923 ntAPPRIS P1 TSL 1 (best) BASIC4.05□□□□□ -1.76
Brf2Q3UAW9 Gm20920-201ENSMUST00000187477 922 ntAPPRIS P1 TSL 1 (best) BASIC4.05□□□□□ -1.76
Brf2Q3UAW9 Gm21627-201ENSMUST00000187768 918 ntAPPRIS P1 TSL 1 (best) BASIC4.05□□□□□ -1.76
Brf2Q3UAW9 Gm29554-201ENSMUST00000187922 821 ntAPPRIS P1 TSL 5 BASIC4.05□□□□□ -1.76
Brf2Q3UAW9 Gm20850-201ENSMUST00000188672 924 ntAPPRIS P1 TSL 1 (best) BASIC4.05□□□□□ -1.76
Brf2Q3UAW9 Gm21488-201ENSMUST00000188744 923 ntAPPRIS P1 TSL 1 (best) BASIC4.05□□□□□ -1.76
Brf2Q3UAW9 Gm20820-201ENSMUST00000188754 921 ntAPPRIS P1 TSL 1 (best) BASIC4.05□□□□□ -1.76
Brf2Q3UAW9 Gm6657-203ENSMUST00000188791 531 ntAPPRIS ALT2 TSL 5 BASIC4.05□□□□□ -1.76
Brf2Q3UAW9 Gm20894-201ENSMUST00000188864 923 ntAPPRIS P1 TSL 1 (best) BASIC4.05□□□□□ -1.76
Brf2Q3UAW9 Gm20869-201ENSMUST00000188958 924 ntAPPRIS P1 TSL 1 (best) BASIC4.05□□□□□ -1.76
Brf2Q3UAW9 Gm21173-201ENSMUST00000189238 923 ntAPPRIS P1 TSL 1 (best) BASIC4.05□□□□□ -1.76
Brf2Q3UAW9 Gm20870-201ENSMUST00000189315 922 ntAPPRIS P1 TSL 5 BASIC4.05□□□□□ -1.76
Brf2Q3UAW9 Gm20903-201ENSMUST00000189346 923 ntAPPRIS P1 TSL 1 (best) BASIC4.05□□□□□ -1.76
Brf2Q3UAW9 Gm21209-202ENSMUST00000189354 922 ntAPPRIS P1 TSL 1 (best) BASIC4.05□□□□□ -1.76
Brf2Q3UAW9 Gm20937-203ENSMUST00000189422 923 ntAPPRIS P1 TSL 1 (best) BASIC4.05□□□□□ -1.76
Brf2Q3UAW9 Gm20890-201ENSMUST00000189518 923 ntAPPRIS P1 TSL 1 (best) BASIC4.05□□□□□ -1.76
Brf2Q3UAW9 Gm21477-202ENSMUST00000189543 924 ntAPPRIS P1 TSL 1 (best) BASIC4.05□□□□□ -1.76
Brf2Q3UAW9 Gm29110-201ENSMUST00000189924 922 ntAPPRIS P1 TSL 1 (best) BASIC4.05□□□□□ -1.76
Brf2Q3UAW9 Gm20814-201ENSMUST00000190173 922 ntAPPRIS P1 TSL 1 (best) BASIC4.05□□□□□ -1.76
Brf2Q3UAW9 Gm29573-201ENSMUST00000190291 919 ntBASIC4.05□□□□□ -1.76
Brf2Q3UAW9 Sly-202ENSMUST00000190292 922 ntAPPRIS P2 TSL 1 (best) BASIC4.05□□□□□ -1.76
Brf2Q3UAW9 Gm21650-202ENSMUST00000190551 923 ntAPPRIS P1 TSL 1 (best) BASIC4.05□□□□□ -1.76
Brf2Q3UAW9 Gm28510-201ENSMUST00000190572 928 ntAPPRIS P1 TSL 1 (best) BASIC4.05□□□□□ -1.76
Brf2Q3UAW9 Gm20905-201ENSMUST00000190782 923 ntAPPRIS P1 TSL 1 (best) BASIC4.05□□□□□ -1.76
Brf2Q3UAW9 Gm20817-201ENSMUST00000191123 923 ntAPPRIS P1 TSL 1 (best) BASIC4.05□□□□□ -1.76
Brf2Q3UAW9 Gm20843-202ENSMUST00000191305 925 ntAPPRIS P1 TSL 1 (best) BASIC4.05□□□□□ -1.76
Brf2Q3UAW9 Gm21258-202ENSMUST00000191553 923 ntAPPRIS P1 TSL 1 (best) BASIC4.05□□□□□ -1.76
Brf2Q3UAW9 Gm37803-201ENSMUST00000191620 711 ntTSL 5 BASIC4.05□□□□□ -1.76
Brf2Q3UAW9 Gm29866-201ENSMUST00000191675 923 ntAPPRIS P1 TSL 1 (best) BASIC4.05□□□□□ -1.76
Brf2Q3UAW9 Gm31571-201ENSMUST00000192521 922 ntAPPRIS P1 TSL 1 (best) BASIC4.05□□□□□ -1.76
Brf2Q3UAW9 Gm30737-201ENSMUST00000192683 923 ntAPPRIS P1 TSL 1 (best) BASIC4.05□□□□□ -1.76
Brf2Q3UAW9 Gm21366-201ENSMUST00000192892 923 ntAPPRIS P1 TSL 1 (best) BASIC4.05□□□□□ -1.76
Brf2Q3UAW9 Gm35134-201ENSMUST00000194086 923 ntAPPRIS P1 TSL 1 (best) BASIC4.05□□□□□ -1.76
Brf2Q3UAW9 Gm43491-201ENSMUST00000197133 784 ntBASIC4.05□□□□□ -1.76
Brf2Q3UAW9 Gm43710-201ENSMUST00000199583 452 ntBASIC4.05□□□□□ -1.76
Brf2Q3UAW9 Gm42850-201ENSMUST00000202094 201 ntBASIC4.05□□□□□ -1.76
Brf2Q3UAW9 2900064F13Rik-201ENSMUST00000202166 1008 ntBASIC4.05□□□□□ -1.76
Brf2Q3UAW9 Gm40293-201ENSMUST00000202596 485 ntTSL 3 BASIC4.05□□□□□ -1.76
Retrieved 100 of 76,532 protein–RNA pairs in 100.3 ms