Protein–RNA interactions for Protein: Q3TL54

Trim43a, Tripartite motif-containing protein 43A, mousemouse

Predictions only

Length 445 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim43aQ3TL54 Csnka2ip-202ENSMUST00000209382 2859 ntAPPRIS ALT2 TSL 5 BASIC3.82□□□□□ -1.8
Trim43aQ3TL54 Gm37064-201ENSMUST00000193851 2231 ntBASIC3.82□□□□□ -1.8
Trim43aQ3TL54 Olfr168-202ENSMUST00000213480 2205 ntAPPRIS P1 TSL 5 BASIC3.82□□□□□ -1.8
Trim43aQ3TL54 Gm37041-201ENSMUST00000195873 3853 ntTSL 1 (best) BASIC3.82□□□□□ -1.8
Trim43aQ3TL54 Gm23532-201ENSMUST00000104569 112 ntBASIC3.82□□□□□ -1.8
Trim43aQ3TL54 Fam122c-201ENSMUST00000114835 745 ntAPPRIS P1 TSL 1 (best) BASIC3.82□□□□□ -1.8
Trim43aQ3TL54 Gm14788-201ENSMUST00000119457 375 ntBASIC3.82□□□□□ -1.8
Trim43aQ3TL54 Gm14927-201ENSMUST00000120283 454 ntBASIC3.82□□□□□ -1.8
Trim43aQ3TL54 Spink2-202ENSMUST00000120429 594 ntTSL 1 (best) BASIC3.82□□□□□ -1.8
Trim43aQ3TL54 Gm12858-201ENSMUST00000121913 208 ntBASIC3.82□□□□□ -1.8
Trim43aQ3TL54 Gm15038-201ENSMUST00000122144 296 ntBASIC3.82□□□□□ -1.8
Trim43aQ3TL54 Gm11656-201ENSMUST00000137462 395 ntTSL 5 BASIC3.82□□□□□ -1.8
Trim43aQ3TL54 Gm13595-201ENSMUST00000145994 494 ntTSL 3 BASIC3.82□□□□□ -1.8
Trim43aQ3TL54 Gm12971-201ENSMUST00000154720 511 ntTSL 5 BASIC3.82□□□□□ -1.8
Trim43aQ3TL54 Gm11917-201ENSMUST00000154813 373 ntTSL 2 BASIC3.82□□□□□ -1.8
Trim43aQ3TL54 Gm25438-201ENSMUST00000158281 110 ntBASIC3.82□□□□□ -1.8
Trim43aQ3TL54 Gm7281-201ENSMUST00000160010 543 ntBASIC3.82□□□□□ -1.8
Trim43aQ3TL54 Gm9890-201ENSMUST00000171867 537 ntBASIC3.82□□□□□ -1.8
Trim43aQ3TL54 Mir713-201ENSMUST00000178651 108 ntBASIC3.82□□□□□ -1.8
Trim43aQ3TL54 Vmn1r227-202ENSMUST00000179914 1026 ntBASIC3.82□□□□□ -1.8
Trim43aQ3TL54 Pnrc2-203ENSMUST00000180300 171 ntTSL 1 (best) BASIC3.82□□□□□ -1.8
Trim43aQ3TL54 BE692007-201ENSMUST00000186054 954 ntTSL 1 (best) BASIC3.82□□□□□ -1.8
Trim43aQ3TL54 1700006F04Rik-201ENSMUST00000188582 441 ntTSL 1 (best) BASIC3.82□□□□□ -1.8
Trim43aQ3TL54 1700020G17Rik-202ENSMUST00000190237 739 ntTSL 1 (best) BASIC3.82□□□□□ -1.8
Trim43aQ3TL54 Gm19774-201ENSMUST00000190667 114 ntBASIC3.82□□□□□ -1.8
Trim43aQ3TL54 Gm8197-201ENSMUST00000192906 363 ntTSL 5 BASIC3.82□□□□□ -1.8
Trim43aQ3TL54 Olfr1244-ps1-201ENSMUST00000213226 683 ntBASIC3.82□□□□□ -1.8
Trim43aQ3TL54 Trdn-202ENSMUST00000217779 1182 ntAPPRIS ALT2 TSL 1 (best) BASIC3.82□□□□□ -1.8
Trim43aQ3TL54 Gm32443-202ENSMUST00000220011 773 ntTSL 5 BASIC3.82□□□□□ -1.8
Trim43aQ3TL54 AC154358.1-201ENSMUST00000224871 218 ntBASIC3.82□□□□□ -1.8
Trim43aQ3TL54 AC167013.2-202ENSMUST00000227035 333 ntBASIC3.82□□□□□ -1.8
Trim43aQ3TL54 Vmn1r72-201ENSMUST00000053134 921 ntAPPRIS P1 BASIC3.82□□□□□ -1.8
Trim43aQ3TL54 Gm4779-201ENSMUST00000056225 672 ntTSL 5 BASIC3.82□□□□□ -1.8
Trim43aQ3TL54 Olfr168-201ENSMUST00000078554 939 ntAPPRIS P1 BASIC3.82□□□□□ -1.8
Trim43aQ3TL54 Olfr1286-202ENSMUST00000184954 3398 ntAPPRIS P1 TSL 3 BASIC3.82□□□□□ -1.8
Trim43aQ3TL54 Gm30292-201ENSMUST00000194198 3000 ntTSL 3 BASIC3.82□□□□□ -1.8
Trim43aQ3TL54 Cfh-202ENSMUST00000111976 4365 ntAPPRIS P2 TSL 1 (best) BASIC3.82□□□□□ -1.8
Trim43aQ3TL54 Cfh-201ENSMUST00000066859 4361 ntAPPRIS ALT2 TSL 1 (best) BASIC3.82□□□□□ -1.8
Trim43aQ3TL54 Dst-203ENSMUST00000115104 23279 ntAPPRIS ALT2 TSL 5 BASIC3.81□□□□□ -1.8
Trim43aQ3TL54 Cp-204ENSMUST00000108328 4504 ntAPPRIS ALT2 TSL 1 (best) BASIC3.81□□□□□ -1.8
Trim43aQ3TL54 Gm18594-201ENSMUST00000175733 1403 ntBASIC3.81□□□□□ -1.8
Trim43aQ3TL54 Olfr1242-202ENSMUST00000111540 2189 ntAPPRIS P1 TSL 3 BASIC3.81□□□□□ -1.8
Trim43aQ3TL54 Gm25420-201ENSMUST00000104216 127 ntBASIC3.81□□□□□ -1.8
Trim43aQ3TL54 Olfr828-201ENSMUST00000104914 939 ntAPPRIS P1 BASIC3.81□□□□□ -1.8
Trim43aQ3TL54 Psmb7-ps2-201ENSMUST00000118546 820 ntBASIC3.81□□□□□ -1.8
Trim43aQ3TL54 Gm11625-201ENSMUST00000119535 296 ntBASIC3.81□□□□□ -1.8
Trim43aQ3TL54 Rab9b-ps1-201ENSMUST00000119785 606 ntBASIC3.81□□□□□ -1.8
Trim43aQ3TL54 Mup-ps21-201ENSMUST00000119998 448 ntBASIC3.81□□□□□ -1.8
Trim43aQ3TL54 Gm23112-201ENSMUST00000158606 125 ntBASIC3.81□□□□□ -1.8
Trim43aQ3TL54 Mir5127-201ENSMUST00000175295 71 ntBASIC3.81□□□□□ -1.8
Trim43aQ3TL54 Ang-ps2-201ENSMUST00000178173 433 ntBASIC3.81□□□□□ -1.8
Trim43aQ3TL54 Ighv6-5-201ENSMUST00000179796 297 ntAPPRIS P1 BASIC3.81□□□□□ -1.8
Trim43aQ3TL54 A630033H20Rik-206ENSMUST00000180182 2997 ntAPPRIS P1 TSL 2 BASIC3.81□□□□□ -1.8
Trim43aQ3TL54 Gm20574-201ENSMUST00000182867 917 ntBASIC3.81□□□□□ -1.8
Trim43aQ3TL54 Gm29408-201ENSMUST00000187536 216 ntBASIC3.81□□□□□ -1.8
Trim43aQ3TL54 Gm29478-201ENSMUST00000191272 688 ntTSL 3 BASIC3.81□□□□□ -1.8
Trim43aQ3TL54 4930433B08Rik-201ENSMUST00000192010 644 ntTSL 1 (best) BASIC3.81□□□□□ -1.8
Trim43aQ3TL54 Gm43405-201ENSMUST00000198642 337 ntBASIC3.81□□□□□ -1.8
Trim43aQ3TL54 Gm44174-201ENSMUST00000205022 141 ntTSL 2 BASIC3.81□□□□□ -1.8
Trim43aQ3TL54 Gm19237-201ENSMUST00000205036 1132 ntBASIC3.81□□□□□ -1.8
Trim43aQ3TL54 Nasp-ps1-201ENSMUST00000205050 691 ntBASIC3.81□□□□□ -1.8
Trim43aQ3TL54 Gm44583-201ENSMUST00000207478 281 ntBASIC3.81□□□□□ -1.8
Trim43aQ3TL54 Gm36243-201ENSMUST00000211546 610 ntTSL 3 BASIC3.81□□□□□ -1.8
Trim43aQ3TL54 Gm45796-201ENSMUST00000212483 114 ntBASIC3.81□□□□□ -1.8
Trim43aQ3TL54 Olfr956-ps1-201ENSMUST00000216492 867 ntBASIC3.81□□□□□ -1.8
Trim43aQ3TL54 Gm7034-201ENSMUST00000218638 645 ntBASIC3.81□□□□□ -1.8
Trim43aQ3TL54 AC158536.1-201ENSMUST00000222510 256 ntBASIC3.81□□□□□ -1.8
Trim43aQ3TL54 Acbd7-202ENSMUST00000228935 534 ntAPPRIS ALT1 BASIC3.81□□□□□ -1.8
Trim43aQ3TL54 Olfr1408-201ENSMUST00000073663 1037 ntAPPRIS P1 BASIC3.81□□□□□ -1.8
Trim43aQ3TL54 Gm25592-201ENSMUST00000082635 131 ntBASIC3.81□□□□□ -1.8
Trim43aQ3TL54 Vmn1r81-201ENSMUST00000086232 921 ntAPPRIS P2 BASIC3.81□□□□□ -1.8
Trim43aQ3TL54 Olfr1218-201ENSMUST00000099798 936 ntAPPRIS P1 BASIC3.81□□□□□ -1.8
Trim43aQ3TL54 Olfr1180-201ENSMUST00000099824 1063 ntAPPRIS P1 BASIC3.81□□□□□ -1.8
Trim43aQ3TL54 Phex-201ENSMUST00000079945 6265 ntAPPRIS P1 TSL 1 (best) BASIC3.81□□□□□ -1.8
Trim43aQ3TL54 Vmn1r18-202ENSMUST00000228574 14315 ntAPPRIS P1 BASIC3.81□□□□□ -1.8
Trim43aQ3TL54 Gm20619-201ENSMUST00000175814 2008 ntTSL 1 (best) BASIC3.81□□□□□ -1.8
Trim43aQ3TL54 Vmn1r56-201ENSMUST00000169556 1832 ntAPPRIS P1 BASIC3.81□□□□□ -1.8
Trim43aQ3TL54 Olfr263-202ENSMUST00000215804 3963 ntAPPRIS P1 TSL 5 BASIC3.81□□□□□ -1.8
Trim43aQ3TL54 Gm37494-202ENSMUST00000188038 16021 ntTSL 5 BASIC3.81□□□□□ -1.8
Trim43aQ3TL54 Lrrd1-201ENSMUST00000044039 2951 ntAPPRIS P1 TSL 1 (best) BASIC3.81□□□□□ -1.8
Trim43aQ3TL54 Ccr2-202ENSMUST00000165984 3515 ntAPPRIS P1 BASIC3.81□□□□□ -1.8
Trim43aQ3TL54 B3galt2-201ENSMUST00000038252 9288 ntAPPRIS P1 TSL 1 (best) BASIC3.81□□□□□ -1.8
Trim43aQ3TL54 Sacs-203ENSMUST00000119943 14991 ntAPPRIS ALT2 TSL 5 BASIC3.8□□□□□ -1.8
Trim43aQ3TL54 Olfr142-202ENSMUST00000213968 3630 ntAPPRIS P1 TSL 5 BASIC3.8□□□□□ -1.8
Trim43aQ3TL54 Gm45884-201ENSMUST00000209540 3416 ntBASIC3.8□□□□□ -1.8
Trim43aQ3TL54 Gm25765-201ENSMUST00000104100 132 ntBASIC3.8□□□□□ -1.8
Trim43aQ3TL54 Mir1193-201ENSMUST00000116761 121 ntBASIC3.8□□□□□ -1.8
Trim43aQ3TL54 Gm15387-201ENSMUST00000120421 648 ntBASIC3.8□□□□□ -1.8
Trim43aQ3TL54 Gm11982-201ENSMUST00000121480 314 ntBASIC3.8□□□□□ -1.8
Trim43aQ3TL54 Gm15263-201ENSMUST00000121556 642 ntBASIC3.8□□□□□ -1.8
Trim43aQ3TL54 Gm14684-201ENSMUST00000145722 123 ntTSL 5 BASIC3.8□□□□□ -1.8
Trim43aQ3TL54 Gm23234-201ENSMUST00000157304 134 ntBASIC3.8□□□□□ -1.8
Trim43aQ3TL54 Gm22501-201ENSMUST00000158981 127 ntBASIC3.8□□□□□ -1.8
Trim43aQ3TL54 Gm18604-201ENSMUST00000172535 558 ntBASIC3.8□□□□□ -1.8
Trim43aQ3TL54 Hmgb1-ps7-201ENSMUST00000173370 648 ntBASIC3.8□□□□□ -1.8
Trim43aQ3TL54 Gm22120-201ENSMUST00000175590 70 ntBASIC3.8□□□□□ -1.8
Trim43aQ3TL54 Obox4-ps8-201ENSMUST00000175831 714 ntBASIC3.8□□□□□ -1.8
Trim43aQ3TL54 Scgb2a2-201ENSMUST00000179814 1107 ntAPPRIS P1 TSL 5 BASIC3.8□□□□□ -1.8
Trim43aQ3TL54 1700029B22Rik-202ENSMUST00000186532 694 ntTSL 1 (best) BASIC3.8□□□□□ -1.8
Trim43aQ3TL54 Scgb2b16-ps-201ENSMUST00000188720 333 ntBASIC3.8□□□□□ -1.8
Retrieved 100 of 76,532 protein–RNA pairs in 60.6 ms