Protein–RNA interactions for Protein: Q0EEE2

Ptchd3, Patched domain-containing protein 3, mousemouse

Predictions only

Length 906 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ptchd3Q0EEE2 Vmn1r-ps20-201ENSMUST00000176809 915 ntBASIC3.82□□□□□ -1.8
Ptchd3Q0EEE2 Obox4-ps14-201ENSMUST00000177198 1127 ntBASIC3.82□□□□□ -1.8
Ptchd3Q0EEE2 Gm22908-201ENSMUST00000177620 110 ntBASIC3.82□□□□□ -1.8
Ptchd3Q0EEE2 9430065F17Rik-202ENSMUST00000180908 1084 ntTSL 1 (best) BASIC3.82□□□□□ -1.8
Ptchd3Q0EEE2 Gm27190-201ENSMUST00000184890 542 ntBASIC3.82□□□□□ -1.8
Ptchd3Q0EEE2 Olfr1055-202ENSMUST00000188023 939 ntBASIC3.82□□□□□ -1.8
Ptchd3Q0EEE2 Sprr2g-202ENSMUST00000189634 651 ntTSL 1 (best) BASIC3.82□□□□□ -1.8
Ptchd3Q0EEE2 Gm33571-201ENSMUST00000193271 657 ntBASIC3.82□□□□□ -1.8
Ptchd3Q0EEE2 Kcnmb2-206ENSMUST00000194796 338 ntTSL 1 (best) BASIC3.82□□□□□ -1.8
Ptchd3Q0EEE2 Gm38216-201ENSMUST00000194872 1214 ntBASIC3.82□□□□□ -1.8
Ptchd3Q0EEE2 Cyp3a63-ps-201ENSMUST00000196626 1170 ntBASIC3.82□□□□□ -1.8
Ptchd3Q0EEE2 Igkv3-12-1-201ENSMUST00000197093 351 ntBASIC3.82□□□□□ -1.8
Ptchd3Q0EEE2 Gm36259-201ENSMUST00000197340 392 ntBASIC3.82□□□□□ -1.8
Ptchd3Q0EEE2 Gm43814-201ENSMUST00000197851 413 ntBASIC3.82□□□□□ -1.8
Ptchd3Q0EEE2 Gm2861-201ENSMUST00000199885 666 ntTSL 1 (best) BASIC3.82□□□□□ -1.8
Ptchd3Q0EEE2 Gm18462-201ENSMUST00000208112 417 ntBASIC3.82□□□□□ -1.8
Ptchd3Q0EEE2 Olfr638-201ENSMUST00000209757 966 ntAPPRIS P2 BASIC3.82□□□□□ -1.8
Ptchd3Q0EEE2 Olfr528-ps1-201ENSMUST00000211655 728 ntBASIC3.82□□□□□ -1.8
Ptchd3Q0EEE2 AC153544.1-201ENSMUST00000217988 400 ntBASIC3.82□□□□□ -1.8
Ptchd3Q0EEE2 AC122317.1-201ENSMUST00000218404 708 ntTSL 5 BASIC3.82□□□□□ -1.8
Ptchd3Q0EEE2 AC160756.1-201ENSMUST00000227266 235 ntBASIC3.82□□□□□ -1.8
Ptchd3Q0EEE2 Acbd7-202ENSMUST00000228935 534 ntAPPRIS ALT1 BASIC3.82□□□□□ -1.8
Ptchd3Q0EEE2 Sprr2g-201ENSMUST00000056590 650 ntAPPRIS P1 TSL 5 BASIC3.82□□□□□ -1.8
Ptchd3Q0EEE2 Olfr479-201ENSMUST00000063151 1111 ntAPPRIS P1 BASIC3.82□□□□□ -1.8
Ptchd3Q0EEE2 Tas2r113-201ENSMUST00000079035 930 ntAPPRIS P1 BASIC3.82□□□□□ -1.8
Ptchd3Q0EEE2 Mir350-201ENSMUST00000083639 99 ntBASIC3.82□□□□□ -1.8
Ptchd3Q0EEE2 Spink13-201ENSMUST00000097557 796 ntAPPRIS P1 TSL 1 (best) BASIC3.82□□□□□ -1.8
Ptchd3Q0EEE2 Olfr1274-ps-202ENSMUST00000216111 3395 ntAPPRIS P1 TSL 5 BASIC3.82□□□□□ -1.8
Ptchd3Q0EEE2 BC051076-202ENSMUST00000199477 2868 ntBASIC3.82□□□□□ -1.8
Ptchd3Q0EEE2 Arhgap12-205ENSMUST00000182066 4506 ntAPPRIS ALT2 TSL 5 BASIC3.82□□□□□ -1.8
Ptchd3Q0EEE2 Vmn1r45-203ENSMUST00000227122 2861 ntBASIC3.81□□□□□ -1.8
Ptchd3Q0EEE2 Dnah7b-201ENSMUST00000069293 12314 ntAPPRIS P1 TSL 5 BASIC3.81□□□□□ -1.8
Ptchd3Q0EEE2 Gm2042-207ENSMUST00000181326 2440 ntAPPRIS ALT2 TSL 1 (best) BASIC3.81□□□□□ -1.8
Ptchd3Q0EEE2 Spata31d1c-201ENSMUST00000099427 3390 ntAPPRIS P1 TSL 1 (best) BASIC3.81□□□□□ -1.8
Ptchd3Q0EEE2 Gm22778-201ENSMUST00000104090 128 ntBASIC3.81□□□□□ -1.8
Ptchd3Q0EEE2 Gm1330-202ENSMUST00000109942 555 ntAPPRIS ALT2 TSL 5 BASIC3.81□□□□□ -1.8
Ptchd3Q0EEE2 4933413L06Rik-201ENSMUST00000110292 809 ntTSL 2 BASIC3.81□□□□□ -1.8
Ptchd3Q0EEE2 Gm8666-201ENSMUST00000117517 292 ntBASIC3.81□□□□□ -1.8
Ptchd3Q0EEE2 Gm12173-201ENSMUST00000117622 273 ntBASIC3.81□□□□□ -1.8
Ptchd3Q0EEE2 Gm13501-201ENSMUST00000118477 979 ntBASIC3.81□□□□□ -1.8
Ptchd3Q0EEE2 Gm2030-201ENSMUST00000119590 1129 ntAPPRIS P1 TSL 5 BASIC3.81□□□□□ -1.8
Ptchd3Q0EEE2 Gm16100-201ENSMUST00000120489 231 ntBASIC3.81□□□□□ -1.8
Ptchd3Q0EEE2 Gm4852-201ENSMUST00000121202 729 ntBASIC3.81□□□□□ -1.8
Ptchd3Q0EEE2 Gm12327-201ENSMUST00000121729 1168 ntBASIC3.81□□□□□ -1.8
Ptchd3Q0EEE2 Gm12103-201ENSMUST00000121892 362 ntBASIC3.81□□□□□ -1.8
Ptchd3Q0EEE2 Gm12762-201ENSMUST00000140881 483 ntTSL 2 BASIC3.81□□□□□ -1.8
Ptchd3Q0EEE2 Gm21814-201ENSMUST00000144085 291 ntTSL 5 BASIC3.81□□□□□ -1.8
Ptchd3Q0EEE2 Gm12195-201ENSMUST00000144990 469 ntTSL 3 BASIC3.81□□□□□ -1.8
Ptchd3Q0EEE2 Gm23387-201ENSMUST00000158586 107 ntBASIC3.81□□□□□ -1.8
Ptchd3Q0EEE2 Gt(ROSA)26Sor-204ENSMUST00000167415 551 ntTSL 1 (best) BASIC3.81□□□□□ -1.8
Ptchd3Q0EEE2 Gm16430-201ENSMUST00000169006 615 ntAPPRIS P1 TSL 3 BASIC3.81□□□□□ -1.8
Ptchd3Q0EEE2 Gm20405-201ENSMUST00000174002 229 ntTSL 5 BASIC3.81□□□□□ -1.8
Ptchd3Q0EEE2 Obox4-ps26-201ENSMUST00000176368 724 ntBASIC3.81□□□□□ -1.8
Ptchd3Q0EEE2 Vmn2r-ps118-201ENSMUST00000176785 908 ntBASIC3.81□□□□□ -1.8
Ptchd3Q0EEE2 Ear1-202ENSMUST00000179200 519 ntAPPRIS P1 TSL 1 (best) BASIC3.81□□□□□ -1.8
Ptchd3Q0EEE2 Gm28685-201ENSMUST00000187545 1101 ntBASIC3.81□□□□□ -1.8
Ptchd3Q0EEE2 1700027A15Rik-202ENSMUST00000188349 617 ntTSL 3 BASIC3.81□□□□□ -1.8
Ptchd3Q0EEE2 Gm42474-201ENSMUST00000201073 505 ntBASIC3.81□□□□□ -1.8
Ptchd3Q0EEE2 Gm5917-201ENSMUST00000217638 721 ntBASIC3.81□□□□□ -1.8
Ptchd3Q0EEE2 4930563J15Rik-203ENSMUST00000219796 574 ntTSL 1 (best) BASIC3.81□□□□□ -1.8
Ptchd3Q0EEE2 Gm40394-201ENSMUST00000221321 633 ntTSL 5 BASIC3.81□□□□□ -1.8
Ptchd3Q0EEE2 AC153662.1-201ENSMUST00000222220 270 ntBASIC3.81□□□□□ -1.8
Ptchd3Q0EEE2 Gm18338-201ENSMUST00000222381 560 ntBASIC3.81□□□□□ -1.8
Ptchd3Q0EEE2 AC173481.1-201ENSMUST00000223351 270 ntBASIC3.81□□□□□ -1.8
Ptchd3Q0EEE2 AC156803.1-201ENSMUST00000224407 820 ntBASIC3.81□□□□□ -1.8
Ptchd3Q0EEE2 Spata4-201ENSMUST00000033917 1057 ntAPPRIS P1 TSL 1 (best) BASIC3.81□□□□□ -1.8
Ptchd3Q0EEE2 Olfr943-201ENSMUST00000071617 1079 ntAPPRIS P2 TSL 3 BASIC3.81□□□□□ -1.8
Ptchd3Q0EEE2 Olfr969-201ENSMUST00000074566 936 ntAPPRIS P1 BASIC3.81□□□□□ -1.8
Ptchd3Q0EEE2 Gm1330-201ENSMUST00000081553 474 ntAPPRIS P5 TSL 5 BASIC3.81□□□□□ -1.8
Ptchd3Q0EEE2 Mir26a-2-201ENSMUST00000083496 84 ntBASIC3.81□□□□□ -1.8
Ptchd3Q0EEE2 Vmn1r74-202ENSMUST00000228471 6608 ntAPPRIS P1 BASIC3.81□□□□□ -1.8
Ptchd3Q0EEE2 Gm43201-201ENSMUST00000195925 3416 ntBASIC3.81□□□□□ -1.8
Ptchd3Q0EEE2 Cdh7-209ENSMUST00000172005 3353 ntAPPRIS P1 TSL 1 (best) BASIC3.81□□□□□ -1.8
Ptchd3Q0EEE2 Gm35835-202ENSMUST00000216984 3350 ntTSL 1 (best) BASIC3.81□□□□□ -1.8
Ptchd3Q0EEE2 Olfr898-202ENSMUST00000216304 3979 ntAPPRIS ALT2 TSL 5 BASIC3.81□□□□□ -1.8
Ptchd3Q0EEE2 Olfr714-203ENSMUST00000214429 4324 ntAPPRIS P1 TSL 5 BASIC3.81□□□□□ -1.8
Ptchd3Q0EEE2 Gm43923-201ENSMUST00000203992 2911 ntBASIC3.81□□□□□ -1.8
Ptchd3Q0EEE2 Atad1-201ENSMUST00000070210 2813 ntAPPRIS P1 TSL 1 (best) BASIC3.8□□□□□ -1.8
Ptchd3Q0EEE2 Vmn1r-ps73-201ENSMUST00000173130 2120 ntBASIC3.8□□□□□ -1.8
Ptchd3Q0EEE2 Olfr1309-203ENSMUST00000214935 5448 ntAPPRIS P1 TSL 5 BASIC3.8□□□□□ -1.8
Ptchd3Q0EEE2 Tug1-202ENSMUST00000144852 4720 ntTSL 1 (best) BASIC3.8□□□□□ -1.8
Ptchd3Q0EEE2 Gm773-201ENSMUST00000101561 951 ntAPPRIS P1 TSL 1 (best) BASIC3.8□□□□□ -1.8
Ptchd3Q0EEE2 Gm8569-201ENSMUST00000117630 647 ntBASIC3.8□□□□□ -1.8
Ptchd3Q0EEE2 Gm15126-201ENSMUST00000118631 833 ntBASIC3.8□□□□□ -1.8
Ptchd3Q0EEE2 Gm12090-201ENSMUST00000118692 758 ntBASIC3.8□□□□□ -1.8
Ptchd3Q0EEE2 Gm12190-201ENSMUST00000120001 187 ntBASIC3.8□□□□□ -1.8
Ptchd3Q0EEE2 Gm11623-201ENSMUST00000120176 1225 ntBASIC3.8□□□□□ -1.8
Ptchd3Q0EEE2 Gm15719-201ENSMUST00000120619 635 ntBASIC3.8□□□□□ -1.8
Ptchd3Q0EEE2 Mup-ps13-201ENSMUST00000120662 545 ntBASIC3.8□□□□□ -1.8
Ptchd3Q0EEE2 Mup-ps1-201ENSMUST00000120720 544 ntBASIC3.8□□□□□ -1.8
Ptchd3Q0EEE2 Gm12881-201ENSMUST00000121191 203 ntBASIC3.8□□□□□ -1.8
Ptchd3Q0EEE2 Gm15949-201ENSMUST00000129485 126 ntTSL 3 BASIC3.8□□□□□ -1.8
Ptchd3Q0EEE2 4930451E10Rik-201ENSMUST00000130840 409 ntTSL 1 (best) BASIC3.8□□□□□ -1.8
Ptchd3Q0EEE2 Mup-ps4-201ENSMUST00000151005 539 ntBASIC3.8□□□□□ -1.8
Ptchd3Q0EEE2 Magea9-ps-202ENSMUST00000167328 899 ntBASIC3.8□□□□□ -1.8
Ptchd3Q0EEE2 Mir5106-201ENSMUST00000174936 73 ntBASIC3.8□□□□□ -1.8
Ptchd3Q0EEE2 Gm27535-201ENSMUST00000183814 157 ntBASIC3.8□□□□□ -1.8
Ptchd3Q0EEE2 Mrps36-ps3-201ENSMUST00000183899 305 ntBASIC3.8□□□□□ -1.8
Ptchd3Q0EEE2 Gm27286-201ENSMUST00000184934 179 ntBASIC3.8□□□□□ -1.8
Ptchd3Q0EEE2 Gm5372-201ENSMUST00000187540 409 ntBASIC3.8□□□□□ -1.8
Retrieved 100 of 76,532 protein–RNA pairs in 123.3 ms