Protein–RNA interactions for Protein: P63158

Hmgb1, High mobility group protein B1, mousemouse

Known RBP Predictions only

Length 215 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hmgb1P63158 Gprc6a-203ENSMUST00000219286 2574 ntTSL 1 (best) BASIC5.23□□□□□ -1.57
Hmgb1P63158 Gm37733-201ENSMUST00000195478 2962 ntBASIC5.23□□□□□ -1.57
Hmgb1P63158 Olfr1226-204ENSMUST00000215987 3251 ntAPPRIS P1 TSL 5 BASIC5.23□□□□□ -1.57
Hmgb1P63158 Gm37099-201ENSMUST00000191902 3451 ntBASIC5.23□□□□□ -1.57
Hmgb1P63158 Rbm41-203ENSMUST00000113007 3691 ntTSL 1 (best) BASIC5.23□□□□□ -1.57
Hmgb1P63158 Skint3-202ENSMUST00000170945 3843 ntAPPRIS ALT2 TSL 1 (best) BASIC5.23□□□□□ -1.57
Hmgb1P63158 Vsig4-201ENSMUST00000050707 1432 ntAPPRIS P1 TSL 1 (best) BASIC5.23□□□□□ -1.57
Hmgb1P63158 Gm37478-201ENSMUST00000193624 3495 ntBASIC5.22□□□□□ -1.57
Hmgb1P63158 Gm19744-204ENSMUST00000188936 4533 ntTSL 1 (best) BASIC5.22□□□□□ -1.57
Hmgb1P63158 Cntn6-205ENSMUST00000162872 3467 ntAPPRIS P1 TSL 1 (best) BASIC5.22□□□□□ -1.57
Hmgb1P63158 Gm14444-201ENSMUST00000109069 919 ntTSL 2 BASIC5.22□□□□□ -1.57
Hmgb1P63158 Prl3c1-202ENSMUST00000110364 850 ntAPPRIS ALT2 TSL 1 (best) BASIC5.22□□□□□ -1.57
Hmgb1P63158 Gm14861-201ENSMUST00000119451 455 ntBASIC5.22□□□□□ -1.57
Hmgb1P63158 Gm12994-201ENSMUST00000119601 447 ntBASIC5.22□□□□□ -1.57
Hmgb1P63158 Gm13537-201ENSMUST00000120467 267 ntBASIC5.22□□□□□ -1.57
Hmgb1P63158 Gm12706-201ENSMUST00000121588 698 ntBASIC5.22□□□□□ -1.57
Hmgb1P63158 Olfr406-201ENSMUST00000133561 1101 ntAPPRIS P1 BASIC5.22□□□□□ -1.57
Hmgb1P63158 Gm12065-201ENSMUST00000149592 656 ntTSL 3 BASIC5.22□□□□□ -1.57
Hmgb1P63158 Gm22794-201ENSMUST00000157228 306 ntBASIC5.22□□□□□ -1.57
Hmgb1P63158 Gm3221-201ENSMUST00000164869 440 ntBASIC5.22□□□□□ -1.57
Hmgb1P63158 Gm17044-201ENSMUST00000168549 828 ntBASIC5.22□□□□□ -1.57
Hmgb1P63158 Gm10717-206ENSMUST00000177875 675 ntTSL 5 BASIC5.22□□□□□ -1.57
Hmgb1P63158 Zfp950-206ENSMUST00000178819 171 ntBASIC5.22□□□□□ -1.57
Hmgb1P63158 Gm10717-208ENSMUST00000179839 681 ntTSL 5 BASIC5.22□□□□□ -1.57
Hmgb1P63158 Gm10717-209ENSMUST00000179982 681 ntTSL 5 BASIC5.22□□□□□ -1.57
Hmgb1P63158 Mir7008-201ENSMUST00000184398 63 ntBASIC5.22□□□□□ -1.57
Hmgb1P63158 Gm4557-201ENSMUST00000185826 907 ntBASIC5.22□□□□□ -1.57
Hmgb1P63158 Gm4526-201ENSMUST00000186039 920 ntBASIC5.22□□□□□ -1.57
Hmgb1P63158 Gm28932-201ENSMUST00000186300 357 ntTSL 5 BASIC5.22□□□□□ -1.57
Hmgb1P63158 Olfr1391-201ENSMUST00000187509 938 ntAPPRIS P1 BASIC5.22□□□□□ -1.57
Hmgb1P63158 Gm8708-201ENSMUST00000188500 906 ntBASIC5.22□□□□□ -1.57
Hmgb1P63158 Gm42465-201ENSMUST00000197036 492 ntBASIC5.22□□□□□ -1.57
Hmgb1P63158 Gm44816-201ENSMUST00000206666 477 ntBASIC5.22□□□□□ -1.57
Hmgb1P63158 Gm45614-201ENSMUST00000209994 721 ntBASIC5.22□□□□□ -1.57
Hmgb1P63158 Gm33601-201ENSMUST00000210001 961 ntBASIC5.22□□□□□ -1.57
Hmgb1P63158 RMST_1.1-204ENSMUST00000217871 699 ntTSL 5 BASIC5.22□□□□□ -1.57
Hmgb1P63158 Gm19256-201ENSMUST00000218550 231 ntBASIC5.22□□□□□ -1.57
Hmgb1P63158 Gm18409-202ENSMUST00000220105 529 ntBASIC5.22□□□□□ -1.57
Hmgb1P63158 AL589696.1-201ENSMUST00000225711 330 ntBASIC5.22□□□□□ -1.57
Hmgb1P63158 AC101945.3-201ENSMUST00000226568 153 ntBASIC5.22□□□□□ -1.57
Hmgb1P63158 Kcnj1-201ENSMUST00000047334 2987 ntAPPRIS P1 TSL 1 (best) BASIC5.22□□□□□ -1.57
Hmgb1P63158 Olfr788-201ENSMUST00000056961 936 ntAPPRIS P1 BASIC5.22□□□□□ -1.57
Hmgb1P63158 Olfr741-201ENSMUST00000071932 936 ntAPPRIS P1 BASIC5.22□□□□□ -1.57
Hmgb1P63158 Gm10717-204ENSMUST00000099056 669 ntTSL 5 BASIC5.22□□□□□ -1.57
Hmgb1P63158 Olfr1164-201ENSMUST00000099834 1112 ntAPPRIS P1 BASIC5.22□□□□□ -1.57
Hmgb1P63158 Olfr1048-201ENSMUST00000099900 963 ntAPPRIS P2 BASIC5.22□□□□□ -1.57
Hmgb1P63158 Vmn2r101-201ENSMUST00000171914 2574 ntAPPRIS P1 TSL 5 BASIC5.22□□□□□ -1.57
Hmgb1P63158 Olfr1331-203ENSMUST00000216589 3139 ntAPPRIS ALT2 TSL 5 BASIC5.22□□□□□ -1.57
Hmgb1P63158 Fat3-205ENSMUST00000217308 18760 ntAPPRIS P1 TSL 5 BASIC5.22□□□□□ -1.57
Hmgb1P63158 AC131743.1-201ENSMUST00000222138 4024 ntBASIC5.22□□□□□ -1.57
Hmgb1P63158 Vmn1r169-204ENSMUST00000227932 2745 ntAPPRIS P1 BASIC5.22□□□□□ -1.57
Hmgb1P63158 Gm2123-201ENSMUST00000221476 2836 ntBASIC5.21□□□□□ -1.57
Hmgb1P63158 Pak3-204ENSMUST00000112865 8484 ntAPPRIS P3 TSL 5 BASIC5.21□□□□□ -1.58
Hmgb1P63158 Gm7308-201ENSMUST00000121087 447 ntBASIC5.21□□□□□ -1.58
Hmgb1P63158 Gm16345-201ENSMUST00000146065 158 ntBASIC5.21□□□□□ -1.58
Hmgb1P63158 Gm25342-201ENSMUST00000157459 122 ntBASIC5.21□□□□□ -1.58
Hmgb1P63158 Gm23534-201ENSMUST00000157539 97 ntBASIC5.21□□□□□ -1.58
Hmgb1P63158 Gm22516-201ENSMUST00000158266 124 ntBASIC5.21□□□□□ -1.58
Hmgb1P63158 Vmn1r-ps26-201ENSMUST00000174239 840 ntBASIC5.21□□□□□ -1.58
Hmgb1P63158 Vmn1r23-201ENSMUST00000175817 997 ntAPPRIS P1 BASIC5.21□□□□□ -1.58
Hmgb1P63158 Gm29484-201ENSMUST00000186067 324 ntBASIC5.21□□□□□ -1.58
Hmgb1P63158 Gm29045-201ENSMUST00000187278 698 ntBASIC5.21□□□□□ -1.58
Hmgb1P63158 Gm29600-201ENSMUST00000188687 377 ntBASIC5.21□□□□□ -1.58
Hmgb1P63158 Gm29332-201ENSMUST00000190829 227 ntBASIC5.21□□□□□ -1.58
Hmgb1P63158 Gm7967-201ENSMUST00000190991 399 ntTSL 3 BASIC5.21□□□□□ -1.58
Hmgb1P63158 Ly6e-215ENSMUST00000191436 1122 ntAPPRIS P1 TSL 1 (best) BASIC5.21□□□□□ -1.58
Hmgb1P63158 Gm44523-201ENSMUST00000205616 417 ntBASIC5.21□□□□□ -1.58
Hmgb1P63158 Gm18597-201ENSMUST00000209519 694 ntBASIC5.21□□□□□ -1.58
Hmgb1P63158 Gm45731-201ENSMUST00000211988 1203 ntBASIC5.21□□□□□ -1.58
Hmgb1P63158 AC115047.1-201ENSMUST00000213795 322 ntBASIC5.21□□□□□ -1.58
Hmgb1P63158 Gm31698-203ENSMUST00000217115 690 ntTSL 5 BASIC5.21□□□□□ -1.58
Hmgb1P63158 AC152979.3-201ENSMUST00000217720 479 ntBASIC5.21□□□□□ -1.58
Hmgb1P63158 CT030662.2-201ENSMUST00000226942 805 ntBASIC5.21□□□□□ -1.58
Hmgb1P63158 Gm23300-201ENSMUST00000082712 125 ntBASIC5.21□□□□□ -1.58
Hmgb1P63158 n-R5s152-201ENSMUST00000093641 119 ntBASIC5.21□□□□□ -1.58
Hmgb1P63158 AC154677.1-201ENSMUST00000227636 2805 ntBASIC5.21□□□□□ -1.58
Hmgb1P63158 Cnot4-206ENSMUST00000202143 3202 ntAPPRIS ALT1 TSL 1 (best) BASIC5.21□□□□□ -1.58
Hmgb1P63158 Olfr205-202ENSMUST00000213910 1650 ntAPPRIS P1 TSL 5 BASIC5.21□□□□□ -1.58
Hmgb1P63158 Gm15319-201ENSMUST00000084046 2522 ntAPPRIS P1 TSL 1 (best) BASIC5.21□□□□□ -1.58
Hmgb1P63158 Gm38505-201ENSMUST00000174005 1326 ntTSL 5 BASIC5.21□□□□□ -1.58
Hmgb1P63158 Pds5b-203ENSMUST00000110486 2900 ntTSL 1 (best) BASIC5.2□□□□□ -1.58
Hmgb1P63158 Olfr733-204ENSMUST00000216195 3669 ntAPPRIS P1 TSL 5 BASIC5.2□□□□□ -1.58
Hmgb1P63158 Gm17131-201ENSMUST00000164420 3846 ntBASIC5.2□□□□□ -1.58
Hmgb1P63158 Gm37831-201ENSMUST00000191685 1787 ntBASIC5.2□□□□□ -1.58
Hmgb1P63158 Mir883a-201ENSMUST00000104824 76 ntBASIC5.2□□□□□ -1.58
Hmgb1P63158 Mir466j-201ENSMUST00000116876 122 ntBASIC5.2□□□□□ -1.58
Hmgb1P63158 Gm11432-201ENSMUST00000117334 231 ntBASIC5.2□□□□□ -1.58
Hmgb1P63158 Gm14007-201ENSMUST00000118288 210 ntBASIC5.2□□□□□ -1.58
Hmgb1P63158 Gm43191-201ENSMUST00000140672 704 ntAPPRIS P1 TSL 3 BASIC5.2□□□□□ -1.58
Hmgb1P63158 Gm14011-201ENSMUST00000145178 302 ntTSL 2 BASIC5.2□□□□□ -1.58
Hmgb1P63158 Gm23537-201ENSMUST00000157536 330 ntBASIC5.2□□□□□ -1.58
Hmgb1P63158 Gm2855-201ENSMUST00000166765 456 ntBASIC5.2□□□□□ -1.58
Hmgb1P63158 Gm26992-201ENSMUST00000182089 468 ntAPPRIS P1 TSL 2 BASIC5.2□□□□□ -1.58
Hmgb1P63158 Gm29259-201ENSMUST00000186396 694 ntBASIC5.2□□□□□ -1.58
Hmgb1P63158 Gm17781-201ENSMUST00000195232 649 ntBASIC5.2□□□□□ -1.58
Hmgb1P63158 Gm44830-201ENSMUST00000207667 584 ntBASIC5.2□□□□□ -1.58
Hmgb1P63158 Gm45686-202ENSMUST00000211580 1138 ntTSL 5 BASIC5.2□□□□□ -1.58
Hmgb1P63158 Olfr964-ps1-201ENSMUST00000217577 914 ntAPPRIS P1 BASIC5.2□□□□□ -1.58
Hmgb1P63158 AC161114.1-201ENSMUST00000218223 474 ntBASIC5.2□□□□□ -1.58
Hmgb1P63158 Gm6056-201ENSMUST00000221253 488 ntBASIC5.2□□□□□ -1.58
Retrieved 100 of 76,532 protein–RNA pairs in 81.5 ms