Protein–RNA interactions for Protein: P59708

Sf3b6, Splicing factor 3B subunit 6, mousemouse

Known RBP Predictions only

Length 125 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sf3b6P59708 AC154788.1-201ENSMUST00000225003 340 ntBASIC4.82□□□□□ -1.64
Sf3b6P59708 AC122341.1-201ENSMUST00000227291 560 ntBASIC4.82□□□□□ -1.64
Sf3b6P59708 AC154239.1-201ENSMUST00000228565 406 ntBASIC4.82□□□□□ -1.64
Sf3b6P59708 Olfr1467-201ENSMUST00000054687 927 ntAPPRIS P1 BASIC4.82□□□□□ -1.64
Sf3b6P59708 Olfr394-201ENSMUST00000071478 933 ntAPPRIS P1 BASIC4.82□□□□□ -1.64
Sf3b6P59708 Gm8104-201ENSMUST00000168165 1761 ntAPPRIS P1 TSL 5 BASIC4.82□□□□□ -1.64
Sf3b6P59708 Gm37639-201ENSMUST00000191623 2785 ntBASIC4.82□□□□□ -1.64
Sf3b6P59708 Clec5a-202ENSMUST00000101491 3747 ntAPPRIS ALT2 TSL 1 (best) BASIC4.82□□□□□ -1.64
Sf3b6P59708 Pum2-201ENSMUST00000020915 3587 ntAPPRIS ALT2 TSL 1 (best) BASIC4.82□□□□□ -1.64
Sf3b6P59708 Vmn1r204-202ENSMUST00000228195 2936 ntAPPRIS P1 BASIC4.82□□□□□ -1.64
Sf3b6P59708 Dhrs9-201ENSMUST00000063690 4281 ntAPPRIS P1 TSL 1 (best) BASIC4.82□□□□□ -1.64
Sf3b6P59708 Gm44321-201ENSMUST00000204262 2855 ntBASIC4.82□□□□□ -1.64
Sf3b6P59708 Piga-202ENSMUST00000112255 3597 ntAPPRIS P1 TSL 1 (best) BASIC4.81□□□□□ -1.64
Sf3b6P59708 Enpp2-203ENSMUST00000171545 2745 ntAPPRIS ALT1 TSL 1 (best) BASIC4.81□□□□□ -1.64
Sf3b6P59708 Dleu2-202ENSMUST00000180917 3544 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
Sf3b6P59708 Pcdh9-202ENSMUST00000192221 5161 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
Sf3b6P59708 Fgf7-202ENSMUST00000110442 2287 ntAPPRIS P1 TSL 1 (best) BASIC4.81□□□□□ -1.64
Sf3b6P59708 Adam5-205ENSMUST00000209935 2272 ntAPPRIS ALT2 TSL 1 (best) BASIC4.81□□□□□ -1.64
Sf3b6P59708 Zscan4a-201ENSMUST00000210573 2279 ntBASIC4.81□□□□□ -1.64
Sf3b6P59708 Ktn1-216ENSMUST00000189533 3941 ntAPPRIS ALT2 TSL 5 BASIC4.81□□□□□ -1.64
Sf3b6P59708 Acsl4-204ENSMUST00000112907 5137 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
Sf3b6P59708 AC112274.1-201ENSMUST00000218957 4274 ntBASIC4.81□□□□□ -1.64
Sf3b6P59708 Gm8980-201ENSMUST00000140232 2197 ntBASIC4.81□□□□□ -1.64
Sf3b6P59708 Dnah6-201ENSMUST00000064948 12652 ntAPPRIS P2 TSL 5 BASIC4.81□□□□□ -1.64
Sf3b6P59708 Setd2-201ENSMUST00000153838 8350 ntAPPRIS P1 TSL 5 BASIC4.81□□□□□ -1.64
Sf3b6P59708 Gm37323-201ENSMUST00000195771 2773 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
Sf3b6P59708 4732416N19Rik-201ENSMUST00000203932 3479 ntBASIC4.81□□□□□ -1.64
Sf3b6P59708 Gm24235-201ENSMUST00000104319 129 ntBASIC4.81□□□□□ -1.64
Sf3b6P59708 Klrc2-203ENSMUST00000118401 707 ntAPPRIS ALT2 TSL 1 (best) BASIC4.81□□□□□ -1.64
Sf3b6P59708 Gm14046-201ENSMUST00000119389 509 ntBASIC4.81□□□□□ -1.64
Sf3b6P59708 Gm8761-201ENSMUST00000121507 955 ntBASIC4.81□□□□□ -1.64
Sf3b6P59708 Gm12609-201ENSMUST00000129908 610 ntTSL 2 BASIC4.81□□□□□ -1.64
Sf3b6P59708 Gm22038-201ENSMUST00000157277 242 ntBASIC4.81□□□□□ -1.64
Sf3b6P59708 Gm6264-202ENSMUST00000162896 1217 ntBASIC4.81□□□□□ -1.64
Sf3b6P59708 Gm4222-201ENSMUST00000165784 470 ntBASIC4.81□□□□□ -1.64
Sf3b6P59708 Gm20468-201ENSMUST00000172664 452 ntTSL 3 BASIC4.81□□□□□ -1.64
Sf3b6P59708 Trav7d-4-201ENSMUST00000178768 451 ntAPPRIS P1 BASIC4.81□□□□□ -1.64
Sf3b6P59708 Gm10251-201ENSMUST00000178788 384 ntAPPRIS P1 TSL 5 BASIC4.81□□□□□ -1.64
Sf3b6P59708 Trav7-4-201ENSMUST00000181728 451 ntAPPRIS P1 BASIC4.81□□□□□ -1.64
Sf3b6P59708 Gm29509-201ENSMUST00000185716 321 ntBASIC4.81□□□□□ -1.64
Sf3b6P59708 Tprkb-208ENSMUST00000200680 814 ntAPPRIS P1 TSL 3 BASIC4.81□□□□□ -1.64
Sf3b6P59708 Pomp-203ENSMUST00000201376 383 ntTSL 3 BASIC4.81□□□□□ -1.64
Sf3b6P59708 Gm43631-201ENSMUST00000202011 369 ntBASIC4.81□□□□□ -1.64
Sf3b6P59708 Gm43968-201ENSMUST00000203388 389 ntBASIC4.81□□□□□ -1.64
Sf3b6P59708 Gm44991-201ENSMUST00000208669 479 ntTSL 3 BASIC4.81□□□□□ -1.64
Sf3b6P59708 Prl4a1-201ENSMUST00000021779 876 ntAPPRIS P1 TSL 1 (best) BASIC4.81□□□□□ -1.64
Sf3b6P59708 Rpl17-ps2-201ENSMUST00000218101 532 ntBASIC4.81□□□□□ -1.64
Sf3b6P59708 Gm33981-201ENSMUST00000219918 660 ntTSL 5 BASIC4.81□□□□□ -1.64
Sf3b6P59708 AC156798.1-201ENSMUST00000220508 224 ntBASIC4.81□□□□□ -1.64
Sf3b6P59708 Ly6e-ps1-201ENSMUST00000222501 367 ntBASIC4.81□□□□□ -1.64
Sf3b6P59708 AC124709.3-201ENSMUST00000227294 171 ntBASIC4.81□□□□□ -1.64
Sf3b6P59708 2310079G19Rik-201ENSMUST00000052337 881 ntAPPRIS P1 BASIC4.81□□□□□ -1.64
Sf3b6P59708 Cldn34c4-201ENSMUST00000052500 814 ntAPPRIS P1 TSL 1 (best) BASIC4.81□□□□□ -1.64
Sf3b6P59708 4930578G10Rik-201ENSMUST00000068158 614 ntAPPRIS P1 TSL 5 BASIC4.81□□□□□ -1.64
Sf3b6P59708 Gm25515-201ENSMUST00000083858 157 ntBASIC4.81□□□□□ -1.64
Sf3b6P59708 Olfr994-201ENSMUST00000099925 945 ntAPPRIS P1 BASIC4.81□□□□□ -1.64
Sf3b6P59708 Zfp763-201ENSMUST00000087654 3407 ntAPPRIS P1 TSL 1 (best) BASIC4.81□□□□□ -1.64
Sf3b6P59708 Elavl4-201ENSMUST00000102722 4107 ntAPPRIS P3 TSL 1 (best) BASIC4.81□□□□□ -1.64
Sf3b6P59708 Elavl4-203ENSMUST00000106597 4149 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
Sf3b6P59708 Vmn2r102-201ENSMUST00000171741 2574 ntAPPRIS P1 TSL 5 BASIC4.81□□□□□ -1.64
Sf3b6P59708 Gm10933-201ENSMUST00000221891 1861 ntBASIC4.81□□□□□ -1.64
Sf3b6P59708 Olfr1416-202ENSMUST00000214928 4838 ntAPPRIS P1 TSL 3 BASIC4.81□□□□□ -1.64
Sf3b6P59708 Vav3-202ENSMUST00000106576 3123 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
Sf3b6P59708 Olfr736-202ENSMUST00000213402 2402 ntAPPRIS P1 TSL 5 BASIC4.81□□□□□ -1.64
Sf3b6P59708 Gm42798-201ENSMUST00000200853 3972 ntBASIC4.8□□□□□ -1.64
Sf3b6P59708 Nxf2-201ENSMUST00000010085 2393 ntAPPRIS ALT2 TSL 1 (best) BASIC4.8□□□□□ -1.64
Sf3b6P59708 Atf2-207ENSMUST00000112017 2396 ntAPPRIS P1 TSL 5 BASIC4.8□□□□□ -1.64
Sf3b6P59708 AC158232.1-202ENSMUST00000218352 3343 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
Sf3b6P59708 Olfr1406-202ENSMUST00000201132 2952 ntAPPRIS P1 TSL 3 BASIC4.8□□□□□ -1.64
Sf3b6P59708 Vmn2r115-201ENSMUST00000168175 2574 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
Sf3b6P59708 Vmn2r98-201ENSMUST00000170424 2574 ntAPPRIS P1 TSL 5 BASIC4.8□□□□□ -1.64
Sf3b6P59708 Gm42923-201ENSMUST00000198438 2896 ntBASIC4.8□□□□□ -1.64
Sf3b6P59708 Zfp113-201ENSMUST00000049393 6470 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
Sf3b6P59708 D7Ertd443e-202ENSMUST00000106129 1306 ntAPPRIS ALT2 TSL 1 (best) BASIC4.8□□□□□ -1.64
Sf3b6P59708 Skint4-201ENSMUST00000069769 3367 ntAPPRIS ALT2 TSL 2 BASIC4.8□□□□□ -1.64
Sf3b6P59708 Gm12245-201ENSMUST00000117266 357 ntBASIC4.8□□□□□ -1.64
Sf3b6P59708 Gm14520-201ENSMUST00000119258 387 ntBASIC4.8□□□□□ -1.64
Sf3b6P59708 Olfr343-ps1-201ENSMUST00000121883 303 ntBASIC4.8□□□□□ -1.64
Sf3b6P59708 Gm11229-201ENSMUST00000121993 437 ntBASIC4.8□□□□□ -1.64
Sf3b6P59708 Gm16126-201ENSMUST00000126025 589 ntTSL 3 BASIC4.8□□□□□ -1.64
Sf3b6P59708 Sox5os3-202ENSMUST00000154167 765 ntTSL 3 BASIC4.8□□□□□ -1.64
Sf3b6P59708 Gm22867-201ENSMUST00000157499 109 ntBASIC4.8□□□□□ -1.64
Sf3b6P59708 Gm22085-201ENSMUST00000158344 110 ntBASIC4.8□□□□□ -1.64
Sf3b6P59708 Smdt1-202ENSMUST00000159054 294 ntTSL 5 BASIC4.8□□□□□ -1.64
Sf3b6P59708 Gm7925-201ENSMUST00000166690 401 ntBASIC4.8□□□□□ -1.64
Sf3b6P59708 Gm23977-201ENSMUST00000177871 74 ntBASIC4.8□□□□□ -1.64
Sf3b6P59708 Gm25361-201ENSMUST00000179358 76 ntBASIC4.8□□□□□ -1.64
Sf3b6P59708 Gm8816-201ENSMUST00000182280 1163 ntBASIC4.8□□□□□ -1.64
Sf3b6P59708 Gm27208-201ENSMUST00000184323 604 ntTSL 3 BASIC4.8□□□□□ -1.64
Sf3b6P59708 Mir6952-201ENSMUST00000185092 61 ntBASIC4.8□□□□□ -1.64
Sf3b6P59708 Gm8241-201ENSMUST00000189286 816 ntBASIC4.8□□□□□ -1.64
Sf3b6P59708 4930520M14Rik-201ENSMUST00000196947 701 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
Sf3b6P59708 Gm43825-201ENSMUST00000199650 734 ntBASIC4.8□□□□□ -1.64
Sf3b6P59708 Gm43101-202ENSMUST00000201733 488 ntTSL 2 BASIC4.8□□□□□ -1.64
Sf3b6P59708 Gm32772-201ENSMUST00000205898 594 ntTSL 3 BASIC4.8□□□□□ -1.64
Sf3b6P59708 Gm44820-201ENSMUST00000207420 396 ntBASIC4.8□□□□□ -1.64
Sf3b6P59708 Gm18854-201ENSMUST00000211196 329 ntBASIC4.8□□□□□ -1.64
Sf3b6P59708 Gm18924-201ENSMUST00000211929 316 ntBASIC4.8□□□□□ -1.64
Sf3b6P59708 Camta1-213ENSMUST00000214673 243 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
Sf3b6P59708 AC124445.1-201ENSMUST00000218613 452 ntBASIC4.8□□□□□ -1.64
Retrieved 100 of 76,532 protein–RNA pairs in 64.2 ms