Protein–RNA interactions for Protein: P53564

Cux1, Homeobox protein cut-like 1, mousemouse

Predictions only

Length 1,515 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cux1P53564 CT009504.1-201ENSMUST00000218252 3330 ntBASIC5.06□□□□□ -1.6
Cux1P53564 Gm7754-201ENSMUST00000223075 2064 ntBASIC5.05□□□□□ -1.6
Cux1P53564 Ighv3-5-201ENSMUST00000103479 299 ntAPPRIS P1 BASIC5.05□□□□□ -1.6
Cux1P53564 Gm8475-201ENSMUST00000118211 526 ntBASIC5.05□□□□□ -1.6
Cux1P53564 Gm22187-201ENSMUST00000157819 129 ntBASIC5.05□□□□□ -1.6
Cux1P53564 Gm23402-201ENSMUST00000178130 107 ntBASIC5.05□□□□□ -1.6
Cux1P53564 Gm5527-201ENSMUST00000179821 642 ntBASIC5.05□□□□□ -1.6
Cux1P53564 AC115750.1-201ENSMUST00000220441 567 ntBASIC5.05□□□□□ -1.6
Cux1P53564 Tex36-201ENSMUST00000033275 958 ntAPPRIS P1 TSL 1 (best) BASIC5.05□□□□□ -1.6
Cux1P53564 Olfr885-201ENSMUST00000081985 930 ntAPPRIS P1 BASIC5.05□□□□□ -1.6
Cux1P53564 Ugp2-202ENSMUST00000102875 2683 ntAPPRIS P1 TSL 1 (best) BASIC5.05□□□□□ -1.6
Cux1P53564 Vmn1r46-202ENSMUST00000205088 10770 ntAPPRIS P1 TSL 2 BASIC5.05□□□□□ -1.6
Cux1P53564 Gm37887-201ENSMUST00000192752 2716 ntBASIC5.05□□□□□ -1.6
Cux1P53564 Gm12374-201ENSMUST00000147108 3299 ntTSL 1 (best) BASIC5.05□□□□□ -1.6
Cux1P53564 Olfr1277-202ENSMUST00000214760 5944 ntAPPRIS P1 TSL 5 BASIC5.04□□□□□ -1.6
Cux1P53564 Gm42909-201ENSMUST00000196982 3619 ntBASIC5.04□□□□□ -1.6
Cux1P53564 Gm13748-201ENSMUST00000149820 378 ntTSL 2 BASIC5.04□□□□□ -1.6
Cux1P53564 Trav7-3-201ENSMUST00000177622 402 ntAPPRIS P1 BASIC5.04□□□□□ -1.6
Cux1P53564 Trav7d-3-201ENSMUST00000179789 402 ntAPPRIS P1 BASIC5.04□□□□□ -1.6
Cux1P53564 Rpl31-ps21-201ENSMUST00000181182 374 ntBASIC5.04□□□□□ -1.6
Cux1P53564 Gm28550-201ENSMUST00000189125 618 ntTSL 5 BASIC5.04□□□□□ -1.6
Cux1P53564 Gm28920-201ENSMUST00000189957 699 ntBASIC5.04□□□□□ -1.6
Cux1P53564 Gm28460-202ENSMUST00000190590 618 ntTSL 1 (best) BASIC5.04□□□□□ -1.6
Cux1P53564 Gm35405-201ENSMUST00000218754 400 ntBASIC5.04□□□□□ -1.6
Cux1P53564 Gm19181-201ENSMUST00000218891 940 ntBASIC5.04□□□□□ -1.6
Cux1P53564 Gm17820-201ENSMUST00000220213 1068 ntBASIC5.04□□□□□ -1.6
Cux1P53564 n-R5s86-201ENSMUST00000083215 119 ntBASIC5.04□□□□□ -1.6
Cux1P53564 AC123035.1-201ENSMUST00000213846 2671 ntTSL 5 BASIC5.04□□□□□ -1.6
Cux1P53564 Gm6176-202ENSMUST00000207633 1581 ntAPPRIS P1 TSL 1 (best) BASIC5.04□□□□□ -1.6
Cux1P53564 Olfr1123-203ENSMUST00000216208 5245 ntAPPRIS ALT2 TSL 2 BASIC5.04□□□□□ -1.6
Cux1P53564 Olfr1484-206ENSMUST00000217451 3628 ntAPPRIS P1 TSL 5 BASIC5.03□□□□□ -1.6
Cux1P53564 n-R5s32-201ENSMUST00000122495 103 ntBASIC5.03□□□□□ -1.6
Cux1P53564 Mir3470b-201ENSMUST00000175563 126 ntBASIC5.03□□□□□ -1.6
Cux1P53564 1700016G22Rik-202ENSMUST00000186843 594 ntTSL 1 (best) BASIC5.03□□□□□ -1.6
Cux1P53564 Gm21718-202ENSMUST00000186974 817 ntTSL 5 BASIC5.03□□□□□ -1.6
Cux1P53564 Gm37996-201ENSMUST00000191859 367 ntBASIC5.03□□□□□ -1.6
Cux1P53564 Gm43812-201ENSMUST00000200976 581 ntTSL 5 BASIC5.03□□□□□ -1.6
Cux1P53564 Gm19126-201ENSMUST00000207896 509 ntBASIC5.03□□□□□ -1.6
Cux1P53564 AC153924.1-201ENSMUST00000220117 312 ntBASIC5.03□□□□□ -1.6
Cux1P53564 AC138401.2-201ENSMUST00000220461 365 ntBASIC5.03□□□□□ -1.6
Cux1P53564 AC124537.1-201ENSMUST00000222890 159 ntBASIC5.03□□□□□ -1.6
Cux1P53564 AC129541.1-201ENSMUST00000226940 523 ntBASIC5.03□□□□□ -1.6
Cux1P53564 Gm336-201ENSMUST00000186376 1480 ntBASIC5.03□□□□□ -1.6
Cux1P53564 Olfr597-202ENSMUST00000216456 2727 ntAPPRIS P1 TSL 5 BASIC5.03□□□□□ -1.6
Cux1P53564 Gm11673-201ENSMUST00000117846 331 ntBASIC5.02□□□□□ -1.61
Cux1P53564 Gm14100-201ENSMUST00000125575 651 ntTSL 3 BASIC5.02□□□□□ -1.61
Cux1P53564 Gm28094-201ENSMUST00000185262 390 ntBASIC5.02□□□□□ -1.61
Cux1P53564 Gm28641-201ENSMUST00000187783 335 ntTSL 5 BASIC5.02□□□□□ -1.61
Cux1P53564 Gm45579-201ENSMUST00000209367 887 ntTSL 5 BASIC5.02□□□□□ -1.61
Cux1P53564 AC166830.1-201ENSMUST00000224201 533 ntBASIC5.02□□□□□ -1.61
Cux1P53564 CT030182.3-201ENSMUST00000225986 582 ntBASIC5.02□□□□□ -1.61
Cux1P53564 AC122937.1-201ENSMUST00000226405 793 ntBASIC5.02□□□□□ -1.61
Cux1P53564 Prr32-201ENSMUST00000040002 1110 ntAPPRIS P1 TSL 1 (best) BASIC5.02□□□□□ -1.61
Cux1P53564 Olfr199-201ENSMUST00000099657 931 ntAPPRIS P1 BASIC5.02□□□□□ -1.61
Cux1P53564 AC122408.2-201ENSMUST00000217901 1391 ntBASIC5.02□□□□□ -1.61
Cux1P53564 Vmn1r79-203ENSMUST00000227530 5581 ntAPPRIS P1 BASIC5.02□□□□□ -1.61
Cux1P53564 Gm10484-201ENSMUST00000196372 4759 ntBASIC5.02□□□□□ -1.61
Cux1P53564 Olfr1438-ps1-201ENSMUST00000208398 4761 ntAPPRIS P1 TSL 5 BASIC5.02□□□□□ -1.61
Cux1P53564 Sycp2-201ENSMUST00000081134 5717 ntAPPRIS P1 TSL 1 (best) BASIC5.02□□□□□ -1.61
Cux1P53564 4932431L22Rik-201ENSMUST00000193456 3140 ntBASIC5.02□□□□□ -1.61
Cux1P53564 Olfr1126-202ENSMUST00000213366 1827 ntAPPRIS P1 TSL 3 BASIC5.02□□□□□ -1.61
Cux1P53564 Olfr1000-203ENSMUST00000216571 2028 ntAPPRIS P1 TSL 5 BASIC5.02□□□□□ -1.61
Cux1P53564 Gm12387-201ENSMUST00000118573 955 ntBASIC5.02□□□□□ -1.61
Cux1P53564 Gm12465-201ENSMUST00000118591 300 ntBASIC5.02□□□□□ -1.61
Cux1P53564 Gm15780-201ENSMUST00000121283 935 ntBASIC5.02□□□□□ -1.61
Cux1P53564 Gm12976-202ENSMUST00000153817 412 ntTSL 3 BASIC5.02□□□□□ -1.61
Cux1P53564 Gm24787-201ENSMUST00000157380 123 ntBASIC5.02□□□□□ -1.61
Cux1P53564 Gm24190-201ENSMUST00000157976 216 ntBASIC5.02□□□□□ -1.61
Cux1P53564 Zfp-ps-201ENSMUST00000185025 478 ntBASIC5.02□□□□□ -1.61
Cux1P53564 Gm20824-201ENSMUST00000186739 919 ntAPPRIS P1 TSL 1 (best) BASIC5.02□□□□□ -1.61
Cux1P53564 Gm43067-201ENSMUST00000201580 445 ntTSL 3 BASIC5.02□□□□□ -1.61
Cux1P53564 1700095K22Rik-201ENSMUST00000206808 282 ntTSL 1 (best) BASIC5.02□□□□□ -1.61
Cux1P53564 AC153932.1-201ENSMUST00000218558 787 ntBASIC5.02□□□□□ -1.61
Cux1P53564 Gm18388-201ENSMUST00000222339 557 ntBASIC5.02□□□□□ -1.61
Cux1P53564 Gm26449-201ENSMUST00000082452 104 ntBASIC5.02□□□□□ -1.61
Cux1P53564 Gm813-201ENSMUST00000099663 702 ntAPPRIS P1 TSL 1 (best) BASIC5.02□□□□□ -1.61
Cux1P53564 Olfr1061-201ENSMUST00000099889 942 ntAPPRIS P1 BASIC5.02□□□□□ -1.61
Cux1P53564 Csmd3-201ENSMUST00000100670 13022 ntAPPRIS P1 TSL 5 BASIC5.02□□□□□ -1.61
Cux1P53564 Gm3095-201ENSMUST00000164696 1568 ntAPPRIS P1 TSL 5 BASIC5.02□□□□□ -1.61
Cux1P53564 Olfr19-202ENSMUST00000206365 1967 ntAPPRIS P1 TSL 3 BASIC5.01□□□□□ -1.61
Cux1P53564 Olfr905-202ENSMUST00000214377 4429 ntAPPRIS P1 TSL 5 BASIC5.01□□□□□ -1.61
Cux1P53564 Rps15a-ps7-201ENSMUST00000117430 392 ntBASIC5.01□□□□□ -1.61
Cux1P53564 Gm14987-201ENSMUST00000117820 676 ntBASIC5.01□□□□□ -1.61
Cux1P53564 Gm12288-201ENSMUST00000121054 1282 ntBASIC5.01□□□□□ -1.61
Cux1P53564 Klra11-ps-201ENSMUST00000122033 810 ntBASIC5.01□□□□□ -1.61
Cux1P53564 Amd-ps5-201ENSMUST00000198406 989 ntBASIC5.01□□□□□ -1.61
Cux1P53564 Gm43825-201ENSMUST00000199650 734 ntBASIC5.01□□□□□ -1.61
Cux1P53564 Olfr477-201ENSMUST00000091605 933 ntAPPRIS P1 BASIC5.01□□□□□ -1.61
Cux1P53564 Ddi1-201ENSMUST00000051706 7114 ntAPPRIS P1 BASIC5.01□□□□□ -1.61
Cux1P53564 Zfp992-201ENSMUST00000105733 4550 ntAPPRIS P1 TSL 3 BASIC5□□□□□ -1.61
Cux1P53564 Olfr1173-201ENSMUST00000099830 2268 ntAPPRIS P1 TSL 5 BASIC5□□□□□ -1.61
Cux1P53564 Olfr1251-201ENSMUST00000214304 3133 ntAPPRIS P1 TSL 5 BASIC5□□□□□ -1.61
Cux1P53564 Gm37900-201ENSMUST00000195510 3805 ntBASIC5□□□□□ -1.61
Cux1P53564 Gm15697-201ENSMUST00000121946 2902 ntBASIC5□□□□□ -1.61
Cux1P53564 Zfp991-201ENSMUST00000084149 2813 ntAPPRIS P1 TSL 1 (best) BASIC5□□□□□ -1.61
Cux1P53564 Gm26423-201ENSMUST00000104277 128 ntBASIC5□□□□□ -1.61
Cux1P53564 Gm15700-201ENSMUST00000139791 821 ntTSL 3 BASIC5□□□□□ -1.61
Cux1P53564 Gm18433-202ENSMUST00000195682 196 ntBASIC5□□□□□ -1.61
Cux1P53564 AC153729.4-201ENSMUST00000217582 3826 ntBASIC5□□□□□ -1.61
Cux1P53564 Olfr784-201ENSMUST00000082342 960 ntAPPRIS P1 BASIC5□□□□□ -1.61
Retrieved 100 of 76,532 protein–RNA pairs in 59.7 ms