Protein–RNA interactions for Protein: P48754

Brca1, Breast cancer type 1 susceptibility protein homolog, mousemouse

Predictions only

Length 1,812 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Brca1P48754 Gm14810-201ENSMUST00000121628 486 ntBASIC3.85□□□□□ -1.79
Brca1P48754 Gm16101-201ENSMUST00000160695 430 ntBASIC3.85□□□□□ -1.79
Brca1P48754 Tshb-202ENSMUST00000170856 552 ntAPPRIS P1 TSL 5 BASIC3.85□□□□□ -1.79
Brca1P48754 Gm20672-201ENSMUST00000176605 261 ntBASIC3.85□□□□□ -1.79
Brca1P48754 Mir6715-201ENSMUST00000184990 57 ntBASIC3.85□□□□□ -1.79
Brca1P48754 Gm29062-201ENSMUST00000186032 694 ntBASIC3.85□□□□□ -1.79
Brca1P48754 Gm29259-201ENSMUST00000186396 694 ntBASIC3.85□□□□□ -1.79
Brca1P48754 Gm28255-201ENSMUST00000187101 694 ntBASIC3.85□□□□□ -1.79
Brca1P48754 Gm29545-201ENSMUST00000188878 694 ntBASIC3.85□□□□□ -1.79
Brca1P48754 Ms4a4a-201ENSMUST00000188995 836 ntAPPRIS P1 TSL 5 BASIC3.85□□□□□ -1.79
Brca1P48754 Gm19039-201ENSMUST00000204363 575 ntBASIC3.85□□□□□ -1.79
Brca1P48754 Gm45259-201ENSMUST00000209217 1006 ntBASIC3.85□□□□□ -1.79
Brca1P48754 Olfr1016-202ENSMUST00000216425 2698 ntAPPRIS P1 TSL 3 BASIC3.85□□□□□ -1.79
Brca1P48754 AC154627.2-201ENSMUST00000227028 4669 ntBASIC3.85□□□□□ -1.79
Brca1P48754 Gm34549-201ENSMUST00000207057 1611 ntTSL 5 BASIC3.85□□□□□ -1.79
Brca1P48754 AC154368.2-201ENSMUST00000222334 1724 ntBASIC3.85□□□□□ -1.79
Brca1P48754 Gm8989-201ENSMUST00000184782 7275 ntBASIC3.85□□□□□ -1.79
Brca1P48754 Olfr376-203ENSMUST00000170592 3211 ntAPPRIS P3 TSL 2 BASIC3.84□□□□□ -1.79
Brca1P48754 Mrgprx2-201ENSMUST00000098433 4610 ntAPPRIS P1 TSL 1 (best) BASIC3.84□□□□□ -1.79
Brca1P48754 Trav8d-2-201ENSMUST00000103605 334 ntAPPRIS ALT2 BASIC3.84□□□□□ -1.79
Brca1P48754 2010106E10Rik-202ENSMUST00000113412 1276 ntAPPRIS P1 TSL 1 (best) BASIC3.84□□□□□ -1.79
Brca1P48754 Gm5943-201ENSMUST00000119458 459 ntBASIC3.84□□□□□ -1.79
Brca1P48754 Gm11479-201ENSMUST00000134275 387 ntTSL 1 (best) BASIC3.84□□□□□ -1.79
Brca1P48754 Gm18560-201ENSMUST00000173463 1123 ntBASIC3.84□□□□□ -1.79
Brca1P48754 Gm7870-201ENSMUST00000184467 616 ntBASIC3.84□□□□□ -1.79
Brca1P48754 Gm44319-201ENSMUST00000196974 93 ntBASIC3.84□□□□□ -1.79
Brca1P48754 Gm44869-201ENSMUST00000208836 357 ntBASIC3.84□□□□□ -1.79
Brca1P48754 Gm30534-201ENSMUST00000217928 207 ntBASIC3.84□□□□□ -1.79
Brca1P48754 AC153924.1-201ENSMUST00000220117 312 ntBASIC3.84□□□□□ -1.79
Brca1P48754 AC132121.1-201ENSMUST00000220774 332 ntBASIC3.84□□□□□ -1.79
Brca1P48754 AC167669.3-201ENSMUST00000224720 393 ntBASIC3.84□□□□□ -1.79
Brca1P48754 AC115291.1-201ENSMUST00000226803 258 ntBASIC3.84□□□□□ -1.79
Brca1P48754 Olfr644-203ENSMUST00000213991 3506 ntAPPRIS P1 TSL 5 BASIC3.84□□□□□ -1.79
Brca1P48754 Gm44164-201ENSMUST00000203605 2561 ntBASIC3.84□□□□□ -1.79
Brca1P48754 Btbd35f5-201ENSMUST00000179538 1950 ntAPPRIS P1 BASIC3.84□□□□□ -1.8
Brca1P48754 Ddi1-201ENSMUST00000051706 7114 ntAPPRIS P1 BASIC3.84□□□□□ -1.8
Brca1P48754 Srek1-204ENSMUST00000210489 6330 ntTSL 1 (best) BASIC3.84□□□□□ -1.8
Brca1P48754 9330159F19Rik-201ENSMUST00000092627 5681 ntAPPRIS P1 TSL 1 (best) BASIC3.84□□□□□ -1.8
Brca1P48754 Serpinb9f-201ENSMUST00000075515 1912 ntAPPRIS P1 TSL 1 (best) BASIC3.84□□□□□ -1.8
Brca1P48754 Matr3-201ENSMUST00000166793 6262 ntAPPRIS P1 TSL 1 (best) BASIC3.84□□□□□ -1.8
Brca1P48754 Gm14901-201ENSMUST00000119001 283 ntBASIC3.84□□□□□ -1.8
Brca1P48754 Gm15218-201ENSMUST00000131006 618 ntTSL 5 BASIC3.84□□□□□ -1.8
Brca1P48754 Gm43191-201ENSMUST00000140672 704 ntAPPRIS P1 TSL 3 BASIC3.84□□□□□ -1.8
Brca1P48754 Gm14257-201ENSMUST00000144649 765 ntTSL 1 (best) BASIC3.84□□□□□ -1.8
Brca1P48754 1700061H18Rik-202ENSMUST00000147221 564 ntTSL 1 (best) BASIC3.84□□□□□ -1.8
Brca1P48754 Gm15819-201ENSMUST00000153089 481 ntTSL 2 BASIC3.84□□□□□ -1.8
Brca1P48754 Gm21999-201ENSMUST00000165985 387 ntBASIC3.84□□□□□ -1.8
Brca1P48754 Gm18520-201ENSMUST00000174783 658 ntBASIC3.84□□□□□ -1.8
Brca1P48754 Ap3m1-ps-201ENSMUST00000177652 1258 ntBASIC3.84□□□□□ -1.8
Brca1P48754 Gm29320-201ENSMUST00000185235 615 ntBASIC3.84□□□□□ -1.8
Brca1P48754 Gm29179-202ENSMUST00000186138 615 ntBASIC3.84□□□□□ -1.8
Brca1P48754 Gm28598-201ENSMUST00000186490 615 ntBASIC3.84□□□□□ -1.8
Brca1P48754 Gm29448-201ENSMUST00000186675 615 ntBASIC3.84□□□□□ -1.8
Brca1P48754 Gm29314-201ENSMUST00000186800 615 ntBASIC3.84□□□□□ -1.8
Brca1P48754 Gm28253-202ENSMUST00000187971 615 ntBASIC3.84□□□□□ -1.8
Brca1P48754 Gm29268-201ENSMUST00000188669 615 ntBASIC3.84□□□□□ -1.8
Brca1P48754 Gm29169-201ENSMUST00000189835 615 ntBASIC3.84□□□□□ -1.8
Brca1P48754 Gm28978-201ENSMUST00000191120 615 ntBASIC3.84□□□□□ -1.8
Brca1P48754 Gm37172-201ENSMUST00000191926 615 ntBASIC3.84□□□□□ -1.8
Brca1P48754 Igkv9-128-201ENSMUST00000196602 353 ntBASIC3.84□□□□□ -1.8
Brca1P48754 Gm43812-201ENSMUST00000200976 581 ntTSL 5 BASIC3.84□□□□□ -1.8
Brca1P48754 Gm18672-201ENSMUST00000208035 270 ntBASIC3.84□□□□□ -1.8
Brca1P48754 Gm18585-201ENSMUST00000215197 556 ntBASIC3.84□□□□□ -1.8
Brca1P48754 AC154527.5-201ENSMUST00000224448 496 ntBASIC3.84□□□□□ -1.8
Brca1P48754 Gm813-201ENSMUST00000099663 702 ntAPPRIS P1 TSL 1 (best) BASIC3.84□□□□□ -1.8
Brca1P48754 C630028M04Rik-201ENSMUST00000141452 3387 ntTSL 1 (best) BASIC3.83□□□□□ -1.8
Brca1P48754 Rnf213-202ENSMUST00000131035 16716 ntAPPRIS P5 TSL 5 BASIC3.83□□□□□ -1.8
Brca1P48754 Huwe1-202ENSMUST00000112622 14168 ntAPPRIS ALT2 TSL 1 (best) BASIC3.83□□□□□ -1.8
Brca1P48754 Vmn1r56-201ENSMUST00000169556 1832 ntAPPRIS P1 BASIC3.83□□□□□ -1.8
Brca1P48754 CT010444.1-201ENSMUST00000219963 3845 ntBASIC3.83□□□□□ -1.8
Brca1P48754 Gm7073-201ENSMUST00000114687 1374 ntAPPRIS P1 TSL 5 BASIC3.83□□□□□ -1.8
Brca1P48754 Gm7073-202ENSMUST00000166562 1369 ntAPPRIS P1 TSL 5 BASIC3.83□□□□□ -1.8
Brca1P48754 Gm10488-201ENSMUST00000101657 874 ntAPPRIS P1 TSL 1 (best) BASIC3.83□□□□□ -1.8
Brca1P48754 Gm11923-201ENSMUST00000118135 508 ntBASIC3.83□□□□□ -1.8
Brca1P48754 Gm9208-201ENSMUST00000120468 948 ntBASIC3.83□□□□□ -1.8
Brca1P48754 Olfr1379-ps1-201ENSMUST00000120726 1001 ntBASIC3.83□□□□□ -1.8
Brca1P48754 Gm16327-201ENSMUST00000137146 228 ntBASIC3.83□□□□□ -1.8
Brca1P48754 Gm24787-201ENSMUST00000157380 123 ntBASIC3.83□□□□□ -1.8
Brca1P48754 Gm23592-201ENSMUST00000157859 117 ntBASIC3.83□□□□□ -1.8
Brca1P48754 Gm4836-201ENSMUST00000179874 907 ntAPPRIS P1 TSL 1 (best) BASIC3.83□□□□□ -1.8
Brca1P48754 Gm10096-202ENSMUST00000180207 907 ntAPPRIS P1 TSL 1 (best) BASIC3.83□□□□□ -1.8
Brca1P48754 Gm10487-202ENSMUST00000180344 907 ntAPPRIS P1 TSL 1 (best) BASIC3.83□□□□□ -1.8
Brca1P48754 Gm37473-201ENSMUST00000195079 674 ntTSL 5 BASIC3.83□□□□□ -1.8
Brca1P48754 AC129219.3-201ENSMUST00000223790 196 ntBASIC3.83□□□□□ -1.8
Brca1P48754 Gm10058-201ENSMUST00000079797 893 ntAPPRIS P1 TSL 1 (best) BASIC3.83□□□□□ -1.8
Brca1P48754 Gm26449-201ENSMUST00000082452 104 ntBASIC3.83□□□□□ -1.8
Brca1P48754 Gm5169-201ENSMUST00000096469 768 ntAPPRIS P1 TSL 1 (best) BASIC3.83□□□□□ -1.8
Brca1P48754 Cfh-206ENSMUST00000192880 3746 ntTSL 5 BASIC3.83□□□□□ -1.8
Brca1P48754 Cysltr1-202ENSMUST00000113480 5142 ntAPPRIS P1 TSL 1 (best) BASIC3.83□□□□□ -1.8
Brca1P48754 AC135119.1-201ENSMUST00000227935 3717 ntBASIC3.83□□□□□ -1.8
Brca1P48754 Homer1-205ENSMUST00000109492 1533 ntTSL 1 (best) BASIC3.83□□□□□ -1.8
Brca1P48754 Olfr1000-203ENSMUST00000216571 2028 ntAPPRIS P1 TSL 5 BASIC3.82□□□□□ -1.8
Brca1P48754 AC122408.2-201ENSMUST00000217901 1391 ntBASIC3.82□□□□□ -1.8
Brca1P48754 Olfr1408-202ENSMUST00000200689 3453 ntAPPRIS P1 TSL 3 BASIC3.82□□□□□ -1.8
Brca1P48754 Olfr160-201ENSMUST00000104875 930 ntAPPRIS P1 BASIC3.82□□□□□ -1.8
Brca1P48754 Gm15323-201ENSMUST00000156109 429 ntTSL 3 BASIC3.82□□□□□ -1.8
Brca1P48754 Mir6398-201ENSMUST00000184541 102 ntBASIC3.82□□□□□ -1.8
Brca1P48754 AC153932.1-201ENSMUST00000218558 787 ntBASIC3.82□□□□□ -1.8
Brca1P48754 AC158798.1-201ENSMUST00000219714 711 ntTSL 5 BASIC3.82□□□□□ -1.8
Brca1P48754 Prl2b1-201ENSMUST00000091678 891 ntAPPRIS ALT2 TSL 1 (best) BASIC3.82□□□□□ -1.8
Retrieved 100 of 76,532 protein–RNA pairs in 85.3 ms