Protein–RNA interactions for Protein: P48377

Rfx1, MHC class II regulatory factor RFX1, mousemouse

Predictions only

Length 963 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rfx1P48377 Pi15-201ENSMUST00000088476 6923 ntAPPRIS P1 TSL 1 (best) BASIC6.12□□□□□ -1.43
Rfx1P48377 Olfr593-201ENSMUST00000098206 984 ntAPPRIS P2 BASIC6.12□□□□□ -1.43
Rfx1P48377 Ankar-202ENSMUST00000211837 4543 ntAPPRIS ALT2 TSL 1 (best) BASIC6.12□□□□□ -1.43
Rfx1P48377 Nr3c2-202ENSMUST00000109911 3804 ntTSL 5 BASIC6.12□□□□□ -1.43
Rfx1P48377 AC121569.1-201ENSMUST00000221043 3666 ntTSL 1 (best) BASIC6.12□□□□□ -1.43
Rfx1P48377 Pnpla8-204ENSMUST00000143771 2974 ntTSL 5 BASIC6.12□□□□□ -1.43
Rfx1P48377 Gm15262-202ENSMUST00000207320 5010 ntAPPRIS P1 TSL 5 BASIC6.11□□□□□ -1.43
Rfx1P48377 Gm43011-201ENSMUST00000197897 4433 ntBASIC6.11□□□□□ -1.43
Rfx1P48377 Gm36229-201ENSMUST00000218737 1855 ntTSL 1 (best) BASIC6.11□□□□□ -1.43
Rfx1P48377 AC115970.1-201ENSMUST00000218910 1758 ntBASIC6.11□□□□□ -1.43
Rfx1P48377 A230057D06Rik-201ENSMUST00000208961 3026 ntTSL 5 BASIC6.11□□□□□ -1.43
Rfx1P48377 Ccdc66-202ENSMUST00000223689 4262 ntAPPRIS P2 BASIC6.11□□□□□ -1.43
Rfx1P48377 Tsga10-203ENSMUST00000114902 2724 ntAPPRIS ALT2 TSL 1 (best) BASIC6.11□□□□□ -1.43
Rfx1P48377 Vmn2r100-201ENSMUST00000166081 2553 ntAPPRIS P1 TSL 5 BASIC6.11□□□□□ -1.43
Rfx1P48377 Tcrg-V3-201ENSMUST00000103559 350 ntAPPRIS ALT2 BASIC6.11□□□□□ -1.43
Rfx1P48377 Gm11386-201ENSMUST00000117761 347 ntBASIC6.11□□□□□ -1.43
Rfx1P48377 Gm12852-201ENSMUST00000119478 719 ntBASIC6.11□□□□□ -1.43
Rfx1P48377 Gm14926-201ENSMUST00000120650 508 ntBASIC6.11□□□□□ -1.43
Rfx1P48377 Gm23837-201ENSMUST00000122656 286 ntBASIC6.11□□□□□ -1.43
Rfx1P48377 Gm25292-201ENSMUST00000122797 322 ntBASIC6.11□□□□□ -1.43
Rfx1P48377 Hnf1aos2-201ENSMUST00000138108 442 ntTSL 3 BASIC6.11□□□□□ -1.43
Rfx1P48377 Gm22596-201ENSMUST00000157601 316 ntBASIC6.11□□□□□ -1.43
Rfx1P48377 Gm22534-201ENSMUST00000158173 104 ntBASIC6.11□□□□□ -1.43
Rfx1P48377 Gm25907-201ENSMUST00000158486 125 ntBASIC6.11□□□□□ -1.43
Rfx1P48377 Gm26468-201ENSMUST00000158644 106 ntBASIC6.11□□□□□ -1.43
Rfx1P48377 Vmn2r-ps33-201ENSMUST00000175691 904 ntBASIC6.11□□□□□ -1.43
Rfx1P48377 Ssxb8-202ENSMUST00000185125 559 ntAPPRIS P1 TSL 5 BASIC6.11□□□□□ -1.43
Rfx1P48377 Mrgprc1-ps-201ENSMUST00000185552 952 ntBASIC6.11□□□□□ -1.43
Rfx1P48377 Gm2914-201ENSMUST00000186120 328 ntBASIC6.11□□□□□ -1.43
Rfx1P48377 Gm28255-201ENSMUST00000187101 694 ntBASIC6.11□□□□□ -1.43
Rfx1P48377 Gm29186-201ENSMUST00000189178 660 ntTSL 2 BASIC6.11□□□□□ -1.43
Rfx1P48377 Gm18964-201ENSMUST00000193013 563 ntBASIC6.11□□□□□ -1.43
Rfx1P48377 Gm37235-201ENSMUST00000195171 59 ntBASIC6.11□□□□□ -1.43
Rfx1P48377 Gm42694-201ENSMUST00000196951 358 ntBASIC6.11□□□□□ -1.43
Rfx1P48377 Gm6260-202ENSMUST00000197170 921 ntTSL 1 (best) BASIC6.11□□□□□ -1.43
Rfx1P48377 Gm35648-201ENSMUST00000202304 475 ntBASIC6.11□□□□□ -1.43
Rfx1P48377 Gm18011-201ENSMUST00000203717 565 ntBASIC6.11□□□□□ -1.43
Rfx1P48377 Gm44132-201ENSMUST00000205142 151 ntBASIC6.11□□□□□ -1.43
Rfx1P48377 Gm18903-201ENSMUST00000215343 480 ntBASIC6.11□□□□□ -1.43
Rfx1P48377 Rpl29-ps2-203ENSMUST00000222043 1036 ntTSL 5 BASIC6.11□□□□□ -1.43
Rfx1P48377 AC154335.2-201ENSMUST00000225916 638 ntBASIC6.11□□□□□ -1.43
Rfx1P48377 AC155237.2-201ENSMUST00000228487 478 ntBASIC6.11□□□□□ -1.43
Rfx1P48377 Olfr835-201ENSMUST00000059315 936 ntAPPRIS P1 BASIC6.11□□□□□ -1.43
Rfx1P48377 Olfr251-201ENSMUST00000072731 951 ntAPPRIS P2 BASIC6.11□□□□□ -1.43
Rfx1P48377 Mir129-1-201ENSMUST00000083535 73 ntBASIC6.11□□□□□ -1.43
Rfx1P48377 Peli1-202ENSMUST00000101477 3703 ntAPPRIS P1 TSL 1 (best) BASIC6.11□□□□□ -1.43
Rfx1P48377 Gabra6-201ENSMUST00000020703 2436 ntAPPRIS P3 TSL 1 (best) BASIC6.11□□□□□ -1.43
Rfx1P48377 Gm7988-201ENSMUST00000196623 2297 ntBASIC6.11□□□□□ -1.43
Rfx1P48377 Wnk3-206ENSMUST00000184730 5253 ntAPPRIS ALT2 TSL 1 (best) BASIC6.11□□□□□ -1.43
Rfx1P48377 Vmn1r71-202ENSMUST00000226874 5194 ntAPPRIS P2 BASIC6.11□□□□□ -1.43
Rfx1P48377 Vmn2r110-201ENSMUST00000169559 2577 ntAPPRIS P1 TSL 5 BASIC6.11□□□□□ -1.43
Rfx1P48377 Gm40987-202ENSMUST00000221856 1588 ntTSL 5 BASIC6.1□□□□□ -1.43
Rfx1P48377 Il6-203ENSMUST00000199183 2343 ntTSL 2 BASIC6.1□□□□□ -1.43
Rfx1P48377 Gpr65-201ENSMUST00000075072 2069 ntAPPRIS P1 TSL 1 (best) BASIC6.1□□□□□ -1.43
Rfx1P48377 Vmn2r80-201ENSMUST00000165834 2690 ntAPPRIS P1 TSL 5 BASIC6.1□□□□□ -1.43
Rfx1P48377 Olfr587-ps1-201ENSMUST00000118378 948 ntAPPRIS P1 BASIC6.1□□□□□ -1.43
Rfx1P48377 Gm11784-201ENSMUST00000118568 474 ntBASIC6.1□□□□□ -1.43
Rfx1P48377 Gm12482-201ENSMUST00000120435 630 ntBASIC6.1□□□□□ -1.43
Rfx1P48377 Hmgb1-ps5-201ENSMUST00000121058 557 ntBASIC6.1□□□□□ -1.43
Rfx1P48377 Gm11842-201ENSMUST00000130117 556 ntTSL 5 BASIC6.1□□□□□ -1.43
Rfx1P48377 Gm14637-201ENSMUST00000156516 444 ntTSL 2 BASIC6.1□□□□□ -1.43
Rfx1P48377 Gm26372-201ENSMUST00000157831 236 ntBASIC6.1□□□□□ -1.43
Rfx1P48377 Gm24419-201ENSMUST00000157875 332 ntBASIC6.1□□□□□ -1.43
Rfx1P48377 Gm25335-201ENSMUST00000158043 103 ntBASIC6.1□□□□□ -1.43
Rfx1P48377 Gm26404-201ENSMUST00000158498 109 ntBASIC6.1□□□□□ -1.43
Rfx1P48377 Gm16290-201ENSMUST00000161175 474 ntBASIC6.1□□□□□ -1.43
Rfx1P48377 Gm8338-201ENSMUST00000163928 363 ntBASIC6.1□□□□□ -1.43
Rfx1P48377 Gm21070-201ENSMUST00000182425 985 ntBASIC6.1□□□□□ -1.43
Rfx1P48377 Gm28353-201ENSMUST00000186482 570 ntBASIC6.1□□□□□ -1.43
Rfx1P48377 Gm28533-201ENSMUST00000186741 570 ntBASIC6.1□□□□□ -1.43
Rfx1P48377 Ighv1-44-201ENSMUST00000195597 352 ntBASIC6.1□□□□□ -1.43
Rfx1P48377 AC136146.1-201ENSMUST00000196180 91 ntBASIC6.1□□□□□ -1.43
Rfx1P48377 1700019F05Rik-201ENSMUST00000202487 533 ntTSL 1 (best) BASIC6.1□□□□□ -1.43
Rfx1P48377 Gm44011-201ENSMUST00000203336 394 ntBASIC6.1□□□□□ -1.43
Rfx1P48377 Gm44989-201ENSMUST00000204749 217 ntBASIC6.1□□□□□ -1.43
Rfx1P48377 Cyp2b27-ps-201ENSMUST00000205582 1279 ntBASIC6.1□□□□□ -1.43
Rfx1P48377 Gm45402-201ENSMUST00000211796 223 ntBASIC6.1□□□□□ -1.43
Rfx1P48377 AC112956.1-201ENSMUST00000213563 492 ntBASIC6.1□□□□□ -1.43
Rfx1P48377 AC155808.1-201ENSMUST00000219288 409 ntBASIC6.1□□□□□ -1.43
Rfx1P48377 Gm7198-201ENSMUST00000219635 1074 ntBASIC6.1□□□□□ -1.43
Rfx1P48377 AC166358.10-201ENSMUST00000220556 144 ntBASIC6.1□□□□□ -1.43
Rfx1P48377 Cycs-ps3-201ENSMUST00000223240 321 ntBASIC6.1□□□□□ -1.43
Rfx1P48377 AC154576.2-203ENSMUST00000224736 253 ntBASIC6.1□□□□□ -1.43
Rfx1P48377 AC115289.1-201ENSMUST00000224915 522 ntBASIC6.1□□□□□ -1.43
Rfx1P48377 Magea1-201ENSMUST00000078193 1108 ntAPPRIS P1 BASIC6.1□□□□□ -1.43
Rfx1P48377 Gm25139-201ENSMUST00000083247 210 ntBASIC6.1□□□□□ -1.43
Rfx1P48377 Gm25818-201ENSMUST00000083282 164 ntBASIC6.1□□□□□ -1.43
Rfx1P48377 Mir20a-201ENSMUST00000083508 107 ntBASIC6.1□□□□□ -1.43
Rfx1P48377 Gm37930-201ENSMUST00000194308 1886 ntBASIC6.1□□□□□ -1.43
Rfx1P48377 Cdk14-203ENSMUST00000115451 5145 ntAPPRIS ALT2 TSL 1 (best) BASIC6.1□□□□□ -1.43
Rfx1P48377 Olfr341-202ENSMUST00000213300 6634 ntAPPRIS P1 TSL 5 BASIC6.1□□□□□ -1.43
Rfx1P48377 Zfp975-201ENSMUST00000107992 3148 ntAPPRIS P1 TSL 1 (best) BASIC6.1□□□□□ -1.43
Rfx1P48377 Gm42548-201ENSMUST00000202669 3933 ntBASIC6.09□□□□□ -1.43
Rfx1P48377 Vmn2r46-201ENSMUST00000171523 2430 ntAPPRIS P1 TSL 5 BASIC6.09□□□□□ -1.43
Rfx1P48377 Gm33378-201ENSMUST00000219831 2758 ntBASIC6.09□□□□□ -1.43
Rfx1P48377 Zfp184-205ENSMUST00000176511 2703 ntAPPRIS P1 TSL 1 (best) BASIC6.09□□□□□ -1.43
Rfx1P48377 Msr1-202ENSMUST00000170091 3636 ntTSL 1 (best) BASIC6.09□□□□□ -1.43
Rfx1P48377 Matr3-201ENSMUST00000166793 6262 ntAPPRIS P1 TSL 1 (best) BASIC6.09□□□□□ -1.43
Rfx1P48377 Meis1-206ENSMUST00000144988 7553 ntTSL 2 BASIC6.09□□□□□ -1.43
Rfx1P48377 Gm8104-201ENSMUST00000168165 1761 ntAPPRIS P1 TSL 5 BASIC6.09□□□□□ -1.43
Retrieved 100 of 76,532 protein–RNA pairs in 65.6 ms