Protein–RNA interactions for Protein: P43241

Cdx2, Homeobox protein CDX-2, mousemouse

Predictions only

Length 311 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdx2P43241 Gm28781-201ENSMUST00000185760 696 ntBASIC3.38□□□□□ -1.87
Cdx2P43241 Gm28339-201ENSMUST00000185845 696 ntBASIC3.38□□□□□ -1.87
Cdx2P43241 Gm28596-201ENSMUST00000185870 696 ntBASIC3.38□□□□□ -1.87
Cdx2P43241 Gm29062-201ENSMUST00000186032 694 ntBASIC3.38□□□□□ -1.87
Cdx2P43241 Gm29574-201ENSMUST00000186226 696 ntBASIC3.38□□□□□ -1.87
Cdx2P43241 Gm28828-201ENSMUST00000186601 696 ntBASIC3.38□□□□□ -1.87
Cdx2P43241 Gm28057-201ENSMUST00000186603 615 ntBASIC3.38□□□□□ -1.87
Cdx2P43241 Gm28255-201ENSMUST00000187101 694 ntBASIC3.38□□□□□ -1.87
Cdx2P43241 Gm29307-201ENSMUST00000187367 696 ntBASIC3.38□□□□□ -1.87
Cdx2P43241 Gm28397-201ENSMUST00000187970 699 ntBASIC3.38□□□□□ -1.87
Cdx2P43241 Gm28896-201ENSMUST00000188609 696 ntBASIC3.38□□□□□ -1.87
Cdx2P43241 Gm29545-201ENSMUST00000188878 694 ntBASIC3.38□□□□□ -1.87
Cdx2P43241 Gm29339-201ENSMUST00000189613 696 ntBASIC3.38□□□□□ -1.87
Cdx2P43241 Gm28920-201ENSMUST00000189957 699 ntBASIC3.38□□□□□ -1.87
Cdx2P43241 Gm28159-201ENSMUST00000190296 696 ntBASIC3.38□□□□□ -1.87
Cdx2P43241 Gm29366-201ENSMUST00000190481 699 ntBASIC3.38□□□□□ -1.87
Cdx2P43241 Gm29407-201ENSMUST00000191468 696 ntBASIC3.38□□□□□ -1.87
Cdx2P43241 Gm32295-201ENSMUST00000192558 696 ntBASIC3.38□□□□□ -1.87
Cdx2P43241 Gm37433-201ENSMUST00000192695 678 ntBASIC3.38□□□□□ -1.87
Cdx2P43241 Gm31260-201ENSMUST00000193478 696 ntBASIC3.38□□□□□ -1.87
Cdx2P43241 Gm9931-201ENSMUST00000193584 1185 ntBASIC3.38□□□□□ -1.87
Cdx2P43241 Gm37441-201ENSMUST00000194430 678 ntBASIC3.38□□□□□ -1.87
Cdx2P43241 Gm38107-201ENSMUST00000194873 696 ntBASIC3.38□□□□□ -1.87
Cdx2P43241 Gm19726-201ENSMUST00000205008 240 ntBASIC3.38□□□□□ -1.87
Cdx2P43241 Olfr1311-201ENSMUST00000208536 943 ntAPPRIS P1 BASIC3.38□□□□□ -1.87
Cdx2P43241 Gm17820-201ENSMUST00000220213 1068 ntBASIC3.38□□□□□ -1.87
Cdx2P43241 Klra7-202ENSMUST00000049304 1075 ntAPPRIS P3 TSL 1 (best) BASIC3.38□□□□□ -1.87
Cdx2P43241 Hamp-201ENSMUST00000062620 410 ntAPPRIS P1 TSL 1 (best) BASIC3.38□□□□□ -1.87
Cdx2P43241 Rps17-201ENSMUST00000080813 494 ntAPPRIS P1 TSL 1 (best) BASIC3.38□□□□□ -1.87
Cdx2P43241 Olfr677-201ENSMUST00000098161 939 ntAPPRIS P1 BASIC3.38□□□□□ -1.87
Cdx2P43241 AY358078-201ENSMUST00000053821 1461 ntAPPRIS P1 TSL 1 (best) BASIC3.38□□□□□ -1.87
Cdx2P43241 AC154634.4-201ENSMUST00000226077 2665 ntBASIC3.38□□□□□ -1.87
Cdx2P43241 Gm4788-202ENSMUST00000111986 2935 ntTSL 1 (best) BASIC3.38□□□□□ -1.87
Cdx2P43241 Olfr365-203ENSMUST00000218602 5374 ntAPPRIS P1 TSL 5 BASIC3.38□□□□□ -1.87
Cdx2P43241 Serpinb6c-201ENSMUST00000110273 1325 ntAPPRIS P1 TSL 5 BASIC3.38□□□□□ -1.87
Cdx2P43241 Csmd3-204ENSMUST00000160658 12460 ntTSL 5 BASIC3.38□□□□□ -1.87
Cdx2P43241 Ms4a2-204ENSMUST00000186978 2391 ntTSL 1 (best) BASIC3.38□□□□□ -1.87
Cdx2P43241 Olfr1277-202ENSMUST00000214760 5944 ntAPPRIS P1 TSL 5 BASIC3.38□□□□□ -1.87
Cdx2P43241 Gm37176-201ENSMUST00000193300 4051 ntBASIC3.38□□□□□ -1.87
Cdx2P43241 Olfr1298-202ENSMUST00000208284 1563 ntAPPRIS P1 TSL 5 BASIC3.38□□□□□ -1.87
Cdx2P43241 Sucnr1-201ENSMUST00000029326 1571 ntAPPRIS P1 TSL 1 (best) BASIC3.38□□□□□ -1.87
Cdx2P43241 4930415L06Rik-201ENSMUST00000088146 2617 ntAPPRIS P1 TSL 1 (best) BASIC3.38□□□□□ -1.87
Cdx2P43241 Gm45322-201ENSMUST00000211642 1361 ntBASIC3.38□□□□□ -1.87
Cdx2P43241 Gm597-201ENSMUST00000059937 2887 ntAPPRIS P1 TSL 1 (best) BASIC3.37□□□□□ -1.87
Cdx2P43241 Olfr836-203ENSMUST00000215981 5046 ntAPPRIS ALT2 TSL 5 BASIC3.37□□□□□ -1.87
Cdx2P43241 Gm6639-202ENSMUST00000196841 2666 ntTSL 5 BASIC3.37□□□□□ -1.87
Cdx2P43241 Mmp1b-201ENSMUST00000047888 1449 ntAPPRIS P1 TSL 1 (best) BASIC3.37□□□□□ -1.87
Cdx2P43241 Gm13974-201ENSMUST00000144368 1454 ntTSL 1 (best) BASIC3.37□□□□□ -1.87
Cdx2P43241 Trbv19-201ENSMUST00000103276 566 ntAPPRIS P1 BASIC3.37□□□□□ -1.87
Cdx2P43241 Gm23747-201ENSMUST00000104228 131 ntBASIC3.37□□□□□ -1.87
Cdx2P43241 Gm14681-201ENSMUST00000118047 411 ntBASIC3.37□□□□□ -1.87
Cdx2P43241 Gm12722-201ENSMUST00000118507 493 ntBASIC3.37□□□□□ -1.87
Cdx2P43241 Gm13788-201ENSMUST00000120767 601 ntBASIC3.37□□□□□ -1.87
Cdx2P43241 Gm13868-201ENSMUST00000122411 294 ntBASIC3.37□□□□□ -1.87
Cdx2P43241 Olfr1177-ps-201ENSMUST00000137895 921 ntAPPRIS ALT2 BASIC3.37□□□□□ -1.87
Cdx2P43241 Gm12226-201ENSMUST00000144172 876 ntBASIC3.37□□□□□ -1.87
Cdx2P43241 4930503B20Rik-203ENSMUST00000149825 970 ntAPPRIS ALT2 TSL 1 (best) BASIC3.37□□□□□ -1.87
Cdx2P43241 Gm25490-201ENSMUST00000158734 130 ntBASIC3.37□□□□□ -1.87
Cdx2P43241 Gt(ROSA)26Sor-204ENSMUST00000167415 551 ntTSL 1 (best) BASIC3.37□□□□□ -1.87
Cdx2P43241 Gm2056-201ENSMUST00000178852 435 ntAPPRIS P1 BASIC3.37□□□□□ -1.87
Cdx2P43241 Gm3454-201ENSMUST00000185571 412 ntBASIC3.37□□□□□ -1.87
Cdx2P43241 Gm43932-201ENSMUST00000204499 52 ntBASIC3.37□□□□□ -1.87
Cdx2P43241 Gm8681-201ENSMUST00000219115 618 ntBASIC3.37□□□□□ -1.87
Cdx2P43241 Gm36525-201ENSMUST00000222590 638 ntTSL 5 BASIC3.37□□□□□ -1.87
Cdx2P43241 Gm44435-201ENSMUST00000204379 4119 ntBASIC3.37□□□□□ -1.87
Cdx2P43241 Gm18913-201ENSMUST00000204311 1789 ntBASIC3.37□□□□□ -1.87
Cdx2P43241 Gm38031-201ENSMUST00000191819 3015 ntBASIC3.37□□□□□ -1.87
Cdx2P43241 Skint3-202ENSMUST00000170945 3843 ntAPPRIS ALT2 TSL 1 (best) BASIC3.37□□□□□ -1.87
Cdx2P43241 Olfr1326-ps1-201ENSMUST00000059880 3637 ntAPPRIS P1 TSL 5 BASIC3.37□□□□□ -1.87
Cdx2P43241 A230081H15Rik-201ENSMUST00000218326 2929 ntBASIC3.37□□□□□ -1.87
Cdx2P43241 Cntn6-202ENSMUST00000161070 3515 ntTSL 5 BASIC3.36□□□□□ -1.87
Cdx2P43241 Gm29674-202ENSMUST00000219664 4083 ntTSL 1 (best) BASIC3.36□□□□□ -1.87
Cdx2P43241 Prlr-205ENSMUST00000128921 3836 ntAPPRIS ALT2 TSL 1 (best) BASIC3.36□□□□□ -1.87
Cdx2P43241 Gm3616-201ENSMUST00000174430 2514 ntBASIC3.36□□□□□ -1.87
Cdx2P43241 Gm3683-201ENSMUST00000175701 2513 ntBASIC3.36□□□□□ -1.87
Cdx2P43241 Mecom-203ENSMUST00000108271 3851 ntAPPRIS ALT2 TSL 1 (best) BASIC3.36□□□□□ -1.87
Cdx2P43241 Gm18432-201ENSMUST00000195568 1451 ntBASIC3.36□□□□□ -1.87
Cdx2P43241 Olfr810-202ENSMUST00000214206 4809 ntAPPRIS P1 TSL 5 BASIC3.36□□□□□ -1.87
Cdx2P43241 Gm14816-201ENSMUST00000117174 294 ntBASIC3.36□□□□□ -1.87
Cdx2P43241 Gm13803-201ENSMUST00000117547 489 ntBASIC3.36□□□□□ -1.87
Cdx2P43241 Gm8244-201ENSMUST00000121254 264 ntBASIC3.36□□□□□ -1.87
Cdx2P43241 Gm6762-201ENSMUST00000121769 289 ntBASIC3.36□□□□□ -1.87
Cdx2P43241 Gm6969-201ENSMUST00000140065 342 ntBASIC3.36□□□□□ -1.87
Cdx2P43241 Gm26171-201ENSMUST00000158422 131 ntBASIC3.36□□□□□ -1.87
Cdx2P43241 Gm2617-201ENSMUST00000185690 1066 ntBASIC3.36□□□□□ -1.87
Cdx2P43241 Rhoay-ps3-201ENSMUST00000187648 576 ntBASIC3.36□□□□□ -1.87
Cdx2P43241 1700020G17Rik-202ENSMUST00000190237 739 ntTSL 1 (best) BASIC3.36□□□□□ -1.87
Cdx2P43241 Gm19057-201ENSMUST00000194329 1197 ntBASIC3.36□□□□□ -1.87
Cdx2P43241 Gm37575-201ENSMUST00000195467 309 ntBASIC3.36□□□□□ -1.87
Cdx2P43241 Gm43476-201ENSMUST00000197873 405 ntBASIC3.36□□□□□ -1.87
Cdx2P43241 Olfr593-202ENSMUST00000210686 951 ntAPPRIS ALT2 BASIC3.36□□□□□ -1.87
Cdx2P43241 Gm45554-202ENSMUST00000210964 1090 ntTSL 5 BASIC3.36□□□□□ -1.87
Cdx2P43241 Gm18228-201ENSMUST00000217297 1091 ntBASIC3.36□□□□□ -1.87
Cdx2P43241 Prl2b1-201ENSMUST00000091678 891 ntAPPRIS ALT2 TSL 1 (best) BASIC3.36□□□□□ -1.87
Cdx2P43241 Gm38091-201ENSMUST00000192418 3871 ntBASIC3.36□□□□□ -1.87
Cdx2P43241 Gm37298-201ENSMUST00000193770 3868 ntBASIC3.36□□□□□ -1.87
Cdx2P43241 Olfr1286-202ENSMUST00000184954 3398 ntAPPRIS P1 TSL 3 BASIC3.36□□□□□ -1.87
Cdx2P43241 Olfr1309-203ENSMUST00000214935 5448 ntAPPRIS P1 TSL 5 BASIC3.36□□□□□ -1.87
Cdx2P43241 Olfr711-202ENSMUST00000207200 2966 ntAPPRIS P1 TSL 2 BASIC3.36□□□□□ -1.87
Cdx2P43241 Epyc-201ENSMUST00000020094 1723 ntAPPRIS P1 TSL 1 (best) BASIC3.36□□□□□ -1.87
Retrieved 100 of 76,532 protein–RNA pairs in 91.9 ms