Protein–RNA interactions for Protein: P39428

Traf1, TNF receptor-associated factor 1, mousemouse

Predictions only

Length 409 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Traf1P39428 Chl1-201ENSMUST00000066905 7562 ntAPPRIS P2 TSL 1 (best) BASIC4.65□□□□□ -1.67
Traf1P39428 Gm10484-201ENSMUST00000196372 4759 ntBASIC4.65□□□□□ -1.67
Traf1P39428 Dync2h1-206ENSMUST00000147193 13103 ntAPPRIS ALT2 TSL 5 BASIC4.65□□□□□ -1.67
Traf1P39428 Gm44689-201ENSMUST00000208786 1372 ntTSL 5 BASIC4.65□□□□□ -1.67
Traf1P39428 Gm9597-202ENSMUST00000227632 1387 ntBASIC4.65□□□□□ -1.67
Traf1P39428 Olfr1180-202ENSMUST00000216121 2079 ntAPPRIS P1 TSL 3 BASIC4.65□□□□□ -1.67
Traf1P39428 Gm12845-202ENSMUST00000204276 1431 ntAPPRIS ALT2 TSL 5 BASIC4.64□□□□□ -1.67
Traf1P39428 Pak3-201ENSMUST00000033640 8348 ntAPPRIS ALT1 TSL 1 (best) BASIC4.64□□□□□ -1.67
Traf1P39428 Gm44947-201ENSMUST00000208462 1981 ntTSL 5 BASIC4.64□□□□□ -1.67
Traf1P39428 Gm37478-201ENSMUST00000193624 3495 ntBASIC4.64□□□□□ -1.67
Traf1P39428 Vmn2r82-201ENSMUST00000170596 3045 ntAPPRIS P1 TSL 5 BASIC4.64□□□□□ -1.67
Traf1P39428 Trav10n-201ENSMUST00000103612 343 ntAPPRIS P1 BASIC4.64□□□□□ -1.67
Traf1P39428 Gm22472-201ENSMUST00000104115 134 ntBASIC4.64□□□□□ -1.67
Traf1P39428 Gm24792-201ENSMUST00000104286 128 ntBASIC4.64□□□□□ -1.67
Traf1P39428 Gm13664-201ENSMUST00000117304 345 ntBASIC4.64□□□□□ -1.67
Traf1P39428 5033423K11Rik-201ENSMUST00000117311 787 ntBASIC4.64□□□□□ -1.67
Traf1P39428 Gm13737-201ENSMUST00000119793 232 ntBASIC4.64□□□□□ -1.67
Traf1P39428 Gm11623-201ENSMUST00000120176 1225 ntBASIC4.64□□□□□ -1.67
Traf1P39428 Gm14591-201ENSMUST00000120407 518 ntBASIC4.64□□□□□ -1.67
Traf1P39428 Olfr1001-ps1-201ENSMUST00000121340 945 ntAPPRIS P1 BASIC4.64□□□□□ -1.67
Traf1P39428 Sval2-201ENSMUST00000014248 585 ntAPPRIS P1 TSL 1 (best) BASIC4.64□□□□□ -1.67
Traf1P39428 Gm21814-201ENSMUST00000144085 291 ntTSL 5 BASIC4.64□□□□□ -1.67
Traf1P39428 Vmn1r-ps65-201ENSMUST00000174235 951 ntBASIC4.64□□□□□ -1.67
Traf1P39428 Gm22398-201ENSMUST00000174941 125 ntBASIC4.64□□□□□ -1.67
Traf1P39428 Gm25731-201ENSMUST00000175167 125 ntBASIC4.64□□□□□ -1.67
Traf1P39428 Obox4-ps15-201ENSMUST00000178057 1140 ntBASIC4.64□□□□□ -1.67
Traf1P39428 Obox4-ps19-201ENSMUST00000178284 1140 ntBASIC4.64□□□□□ -1.67
Traf1P39428 Obox4-ps20-201ENSMUST00000179591 1140 ntBASIC4.64□□□□□ -1.67
Traf1P39428 Obox4-ps21-201ENSMUST00000179856 1140 ntBASIC4.64□□□□□ -1.67
Traf1P39428 Rp31-ps19-201ENSMUST00000180929 353 ntBASIC4.64□□□□□ -1.67
Traf1P39428 Tmem167-ps1-201ENSMUST00000191236 214 ntBASIC4.64□□□□□ -1.67
Traf1P39428 Gm44703-201ENSMUST00000205724 248 ntBASIC4.64□□□□□ -1.67
Traf1P39428 Gm5917-201ENSMUST00000217638 721 ntBASIC4.64□□□□□ -1.67
Traf1P39428 AC159380.1-201ENSMUST00000218096 121 ntBASIC4.64□□□□□ -1.67
Traf1P39428 Gm29674-201ENSMUST00000218791 1139 ntTSL 5 BASIC4.64□□□□□ -1.67
Traf1P39428 AC126043.1-201ENSMUST00000221304 1141 ntBASIC4.64□□□□□ -1.67
Traf1P39428 AC158523.1-201ENSMUST00000221398 328 ntBASIC4.64□□□□□ -1.67
Traf1P39428 CT571256.1-201ENSMUST00000226045 585 ntBASIC4.64□□□□□ -1.67
Traf1P39428 Olfr902-201ENSMUST00000050733 1056 ntAPPRIS P1 BASIC4.64□□□□□ -1.67
Traf1P39428 Olfr1442-201ENSMUST00000057924 1065 ntAPPRIS P1 BASIC4.64□□□□□ -1.67
Traf1P39428 Olfr1260-201ENSMUST00000061830 933 ntAPPRIS P1 BASIC4.64□□□□□ -1.67
Traf1P39428 Olfr787-201ENSMUST00000077836 939 ntAPPRIS P1 BASIC4.64□□□□□ -1.67
Traf1P39428 Olfr1195-201ENSMUST00000099818 927 ntAPPRIS P1 BASIC4.64□□□□□ -1.67
Traf1P39428 Vmn2r-ps47-201ENSMUST00000174515 2557 ntBASIC4.64□□□□□ -1.67
Traf1P39428 Vmn2r31-201ENSMUST00000075108 3660 ntAPPRIS P1 TSL 5 BASIC4.64□□□□□ -1.67
Traf1P39428 Nat1-201ENSMUST00000026677 1347 ntAPPRIS P2 BASIC4.64□□□□□ -1.67
Traf1P39428 Gm45577-201ENSMUST00000210206 2287 ntBASIC4.63□□□□□ -1.67
Traf1P39428 Efhc2-201ENSMUST00000026014 2554 ntAPPRIS P1 TSL 1 (best) BASIC4.63□□□□□ -1.67
Traf1P39428 Neurod4-201ENSMUST00000061571 3345 ntAPPRIS P1 TSL 1 (best) BASIC4.63□□□□□ -1.67
Traf1P39428 Gm37626-201ENSMUST00000194332 4563 ntBASIC4.63□□□□□ -1.67
Traf1P39428 Gm36969-201ENSMUST00000194551 2809 ntBASIC4.63□□□□□ -1.67
Traf1P39428 Fbxo48-202ENSMUST00000109635 1098 ntAPPRIS P1 TSL 1 (best) BASIC4.63□□□□□ -1.67
Traf1P39428 Gm16400-201ENSMUST00000116523 1029 ntBASIC4.63□□□□□ -1.67
Traf1P39428 Gm15018-201ENSMUST00000117090 633 ntBASIC4.63□□□□□ -1.67
Traf1P39428 Gm14541-201ENSMUST00000118985 157 ntBASIC4.63□□□□□ -1.67
Traf1P39428 Gm14881-201ENSMUST00000120366 372 ntBASIC4.63□□□□□ -1.67
Traf1P39428 Gm15038-201ENSMUST00000122144 296 ntBASIC4.63□□□□□ -1.67
Traf1P39428 Gm25292-201ENSMUST00000122797 322 ntBASIC4.63□□□□□ -1.67
Traf1P39428 Gm9613-201ENSMUST00000171662 196 ntBASIC4.63□□□□□ -1.67
Traf1P39428 Pid1-206ENSMUST00000176822 1119 ntTSL 2 BASIC4.63□□□□□ -1.67
Traf1P39428 Gm20776-201ENSMUST00000189940 700 ntBASIC4.63□□□□□ -1.67
Traf1P39428 Gm28902-201ENSMUST00000191531 215 ntTSL 5 BASIC4.63□□□□□ -1.67
Traf1P39428 4930404A12Rik-201ENSMUST00000199356 726 ntTSL 1 (best) BASIC4.63□□□□□ -1.67
Traf1P39428 Gm45031-201ENSMUST00000206800 288 ntBASIC4.63□□□□□ -1.67
Traf1P39428 Gm9375-201ENSMUST00000208899 903 ntBASIC4.63□□□□□ -1.67
Traf1P39428 AC118006.1-201ENSMUST00000224211 501 ntBASIC4.63□□□□□ -1.67
Traf1P39428 AC107663.3-201ENSMUST00000225873 601 ntBASIC4.63□□□□□ -1.67
Traf1P39428 Olfr867-201ENSMUST00000060780 996 ntAPPRIS P1 BASIC4.63□□□□□ -1.67
Traf1P39428 Olfr919-201ENSMUST00000071425 948 ntAPPRIS P2 BASIC4.63□□□□□ -1.67
Traf1P39428 Olfr504-201ENSMUST00000075595 958 ntAPPRIS P1 BASIC4.63□□□□□ -1.67
Traf1P39428 Tas2r113-201ENSMUST00000079035 930 ntAPPRIS P1 BASIC4.63□□□□□ -1.67
Traf1P39428 Olfr1490-201ENSMUST00000080162 951 ntAPPRIS P2 BASIC4.63□□□□□ -1.67
Traf1P39428 Gm23628-201ENSMUST00000082464 173 ntBASIC4.63□□□□□ -1.67
Traf1P39428 Ang6-201ENSMUST00000096869 444 ntAPPRIS P1 BASIC4.63□□□□□ -1.67
Traf1P39428 Olfr1140-203ENSMUST00000217572 1327 ntAPPRIS P1 BASIC4.63□□□□□ -1.67
Traf1P39428 AC154323.3-201ENSMUST00000226927 1660 ntBASIC4.63□□□□□ -1.67
Traf1P39428 Gm15773-201ENSMUST00000118665 1448 ntBASIC4.63□□□□□ -1.67
Traf1P39428 Nebl-202ENSMUST00000124270 8079 ntTSL 5 BASIC4.62□□□□□ -1.67
Traf1P39428 Olfr706-202ENSMUST00000213918 4828 ntAPPRIS P1 TSL 5 BASIC4.62□□□□□ -1.67
Traf1P39428 Olfr1016-202ENSMUST00000216425 2698 ntAPPRIS P1 TSL 3 BASIC4.62□□□□□ -1.67
Traf1P39428 Mga-204ENSMUST00000110774 13931 ntAPPRIS P3 TSL 5 BASIC4.62□□□□□ -1.67
Traf1P39428 Gm24067-201ENSMUST00000104514 85 ntBASIC4.62□□□□□ -1.67
Traf1P39428 Gm6429-201ENSMUST00000117144 475 ntBASIC4.62□□□□□ -1.67
Traf1P39428 Gm11406-201ENSMUST00000117418 484 ntBASIC4.62□□□□□ -1.67
Traf1P39428 Gm11393-201ENSMUST00000118019 288 ntBASIC4.62□□□□□ -1.67
Traf1P39428 Gm11881-201ENSMUST00000119408 572 ntBASIC4.62□□□□□ -1.67
Traf1P39428 Gm6584-201ENSMUST00000119671 447 ntBASIC4.62□□□□□ -1.67
Traf1P39428 Gm13170-201ENSMUST00000119716 643 ntBASIC4.62□□□□□ -1.67
Traf1P39428 Gm14577-201ENSMUST00000121134 256 ntBASIC4.62□□□□□ -1.67
Traf1P39428 Gm11419-201ENSMUST00000150772 683 ntTSL 1 (best) BASIC4.62□□□□□ -1.67
Traf1P39428 Gm8224-201ENSMUST00000166178 497 ntBASIC4.62□□□□□ -1.67
Traf1P39428 Olfr296-ps1-201ENSMUST00000173904 1102 ntAPPRIS P1 TSL 5 BASIC4.62□□□□□ -1.67
Traf1P39428 Gm24111-201ENSMUST00000175491 97 ntBASIC4.62□□□□□ -1.67
Traf1P39428 Gm5798-202ENSMUST00000179987 582 ntTSL 3 BASIC4.62□□□□□ -1.67
Traf1P39428 Gm10925-201ENSMUST00000189941 678 ntBASIC4.62□□□□□ -1.67
Traf1P39428 Gm37791-201ENSMUST00000195081 286 ntBASIC4.62□□□□□ -1.67
Traf1P39428 Gm42453-201ENSMUST00000200477 409 ntBASIC4.62□□□□□ -1.67
Traf1P39428 Gm44583-201ENSMUST00000207478 281 ntBASIC4.62□□□□□ -1.67
Traf1P39428 2500002B13Rik-202ENSMUST00000210752 298 ntTSL 1 (best) BASIC4.62□□□□□ -1.67
Traf1P39428 Prl8a1-201ENSMUST00000006664 864 ntAPPRIS P1 TSL 1 (best) BASIC4.62□□□□□ -1.67
Retrieved 100 of 76,532 protein–RNA pairs in 104.1 ms