Protein–RNA interactions for Protein: P11260

Lire1, LINE-1 retrotransposable element ORF1 protein, mousemouse

Predictions only

Length 357 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lire1P11260 Gm12909-201ENSMUST00000134190 620 ntTSL 2 BASIC4.14□□□□□ -1.75
Lire1P11260 Gm24930-201ENSMUST00000158315 83 ntBASIC4.14□□□□□ -1.75
Lire1P11260 Gm17194-201ENSMUST00000164610 348 ntBASIC4.14□□□□□ -1.75
Lire1P11260 Gm17655-201ENSMUST00000167969 255 ntBASIC4.14□□□□□ -1.75
Lire1P11260 Gm6113-201ENSMUST00000180319 639 ntBASIC4.14□□□□□ -1.75
Lire1P11260 Gm18727-201ENSMUST00000185981 553 ntBASIC4.14□□□□□ -1.75
Lire1P11260 Scgb2b5-ps-201ENSMUST00000190227 270 ntBASIC4.14□□□□□ -1.75
Lire1P11260 Gm38221-201ENSMUST00000195146 365 ntBASIC4.14□□□□□ -1.75
Lire1P11260 Gm7652-201ENSMUST00000200440 1151 ntBASIC4.14□□□□□ -1.75
Lire1P11260 Gm43897-201ENSMUST00000204019 309 ntBASIC4.14□□□□□ -1.75
Lire1P11260 Reg3d-203ENSMUST00000205240 544 ntTSL 2 BASIC4.14□□□□□ -1.75
Lire1P11260 Gm38944-201ENSMUST00000208218 512 ntTSL 2 BASIC4.14□□□□□ -1.75
Lire1P11260 Olfr151-201ENSMUST00000211893 1128 ntAPPRIS P1 BASIC4.14□□□□□ -1.75
Lire1P11260 Gm2059-201ENSMUST00000212025 287 ntBASIC4.14□□□□□ -1.75
Lire1P11260 Gm19170-201ENSMUST00000212440 1084 ntBASIC4.14□□□□□ -1.75
Lire1P11260 Gm30674-201ENSMUST00000214523 392 ntBASIC4.14□□□□□ -1.75
Lire1P11260 AC134596.2-201ENSMUST00000222158 171 ntBASIC4.14□□□□□ -1.75
Lire1P11260 AC134254.4-201ENSMUST00000223086 370 ntBASIC4.14□□□□□ -1.75
Lire1P11260 AC133654.1-201ENSMUST00000228411 672 ntBASIC4.14□□□□□ -1.75
Lire1P11260 Defb1-201ENSMUST00000051017 872 ntAPPRIS P1 TSL 1 (best) BASIC4.14□□□□□ -1.75
Lire1P11260 Zfp982-201ENSMUST00000063704 1244 ntAPPRIS P1 TSL 3 BASIC4.14□□□□□ -1.75
Lire1P11260 Gm23464-201ENSMUST00000083145 147 ntBASIC4.14□□□□□ -1.75
Lire1P11260 4932414N04Rik-204ENSMUST00000128259 3645 ntAPPRIS P1 TSL 1 (best) BASIC4.14□□□□□ -1.75
Lire1P11260 Vmn2r36-201ENSMUST00000170402 2561 ntAPPRIS P1 TSL 5 BASIC4.14□□□□□ -1.75
Lire1P11260 Gm7452-202ENSMUST00000202891 3039 ntBASIC4.14□□□□□ -1.75
Lire1P11260 Gm44947-201ENSMUST00000208462 1981 ntTSL 5 BASIC4.14□□□□□ -1.75
Lire1P11260 Gm43341-201ENSMUST00000200104 1308 ntBASIC4.14□□□□□ -1.75
Lire1P11260 Ccr3-201ENSMUST00000039171 3272 ntAPPRIS P1 TSL 1 (best) BASIC4.13□□□□□ -1.75
Lire1P11260 Vmn1r185-213ENSMUST00000228676 5199 ntAPPRIS P1 BASIC4.13□□□□□ -1.75
Lire1P11260 Atad1-201ENSMUST00000070210 2813 ntAPPRIS P1 TSL 1 (best) BASIC4.13□□□□□ -1.75
Lire1P11260 A830019L24Rik-201ENSMUST00000197226 1652 ntTSL 1 (best) BASIC4.13□□□□□ -1.75
Lire1P11260 Spata31d1c-201ENSMUST00000099427 3390 ntAPPRIS P1 TSL 1 (best) BASIC4.13□□□□□ -1.75
Lire1P11260 Olfr107-205ENSMUST00000216844 4021 ntAPPRIS P1 TSL 5 BASIC4.13□□□□□ -1.75
Lire1P11260 Vmn1r42-202ENSMUST00000226436 4045 ntAPPRIS P1 BASIC4.13□□□□□ -1.75
Lire1P11260 Gm22473-201ENSMUST00000104114 132 ntBASIC4.13□□□□□ -1.75
Lire1P11260 Gm13664-201ENSMUST00000117304 345 ntBASIC4.13□□□□□ -1.75
Lire1P11260 Xlr5d-ps-201ENSMUST00000117501 782 ntBASIC4.13□□□□□ -1.75
Lire1P11260 Gm7485-201ENSMUST00000119502 1109 ntBASIC4.13□□□□□ -1.75
Lire1P11260 Gm24905-201ENSMUST00000158129 104 ntBASIC4.13□□□□□ -1.75
Lire1P11260 Gm17571-201ENSMUST00000167906 90 ntAPPRIS P1 TSL 5 BASIC4.13□□□□□ -1.75
Lire1P11260 Snhg14-201ENSMUST00000185272 726 ntTSL 5 BASIC4.13□□□□□ -1.75
Lire1P11260 Gm3259-205ENSMUST00000185432 1077 ntTSL 3 BASIC4.13□□□□□ -1.75
Lire1P11260 Gm4557-201ENSMUST00000185826 907 ntBASIC4.13□□□□□ -1.75
Lire1P11260 Gm4526-201ENSMUST00000186039 920 ntBASIC4.13□□□□□ -1.75
Lire1P11260 Gm21294-201ENSMUST00000186443 934 ntAPPRIS P1 TSL 5 BASIC4.13□□□□□ -1.75
Lire1P11260 Gm20888-202ENSMUST00000186890 919 ntAPPRIS P1 TSL 1 (best) BASIC4.13□□□□□ -1.75
Lire1P11260 Gm8708-201ENSMUST00000188500 906 ntBASIC4.13□□□□□ -1.75
Lire1P11260 Gm3145-201ENSMUST00000188584 220 ntBASIC4.13□□□□□ -1.75
Lire1P11260 Gm21497-201ENSMUST00000189455 919 ntAPPRIS P1 TSL 1 (best) BASIC4.13□□□□□ -1.75
Lire1P11260 Gm20811-201ENSMUST00000190500 553 ntBASIC4.13□□□□□ -1.75
Lire1P11260 Gm29359-201ENSMUST00000191007 495 ntTSL 5 BASIC4.13□□□□□ -1.75
Lire1P11260 Gm6590-201ENSMUST00000203343 687 ntBASIC4.13□□□□□ -1.75
Lire1P11260 AC107808.2-201ENSMUST00000213542 1027 ntTSL 5 BASIC4.13□□□□□ -1.75
Lire1P11260 AC166263.1-201ENSMUST00000218586 238 ntBASIC4.13□□□□□ -1.75
Lire1P11260 AC140381.1-201ENSMUST00000219168 367 ntTSL 2 BASIC4.13□□□□□ -1.75
Lire1P11260 AC125379.1-201ENSMUST00000221928 111 ntBASIC4.13□□□□□ -1.75
Lire1P11260 Gpx8-201ENSMUST00000022282 1018 ntAPPRIS P1 TSL 1 (best) BASIC4.13□□□□□ -1.75
Lire1P11260 AC164116.1-201ENSMUST00000225810 622 ntBASIC4.13□□□□□ -1.75
Lire1P11260 Cr2-201ENSMUST00000043104 1044 ntTSL 5 BASIC4.13□□□□□ -1.75
Lire1P11260 Olfr1148-201ENSMUST00000077580 945 ntAPPRIS P1 BASIC4.13□□□□□ -1.75
Lire1P11260 Cdh7-209ENSMUST00000172005 3353 ntAPPRIS P1 TSL 1 (best) BASIC4.13□□□□□ -1.75
Lire1P11260 Pate3-201ENSMUST00000178236 1329 ntAPPRIS P1 TSL 1 (best) BASIC4.13□□□□□ -1.75
Lire1P11260 Olfr810-204ENSMUST00000217283 4527 ntAPPRIS P1 TSL 5 BASIC4.13□□□□□ -1.75
Lire1P11260 Zfp708-201ENSMUST00000109742 2416 ntAPPRIS P2 TSL 1 (best) BASIC4.13□□□□□ -1.75
Lire1P11260 Olfr613-201ENSMUST00000106888 5139 ntAPPRIS P1 BASIC4.13□□□□□ -1.75
Lire1P11260 Olfr194-202ENSMUST00000213228 3668 ntAPPRIS P1 TSL 5 BASIC4.13□□□□□ -1.75
Lire1P11260 Vmn2r35-201ENSMUST00000169683 2586 ntAPPRIS P1 TSL 5 BASIC4.12□□□□□ -1.75
Lire1P11260 Gm12845-201ENSMUST00000203629 1767 ntAPPRIS P5 TSL 5 BASIC4.12□□□□□ -1.75
Lire1P11260 Zfp280c-201ENSMUST00000072292 4045 ntAPPRIS ALT2 TSL 1 (best) BASIC4.12□□□□□ -1.75
Lire1P11260 Gm14929-201ENSMUST00000152079 1850 ntTSL 1 (best) BASIC4.12□□□□□ -1.75
Lire1P11260 Nlrp9a-201ENSMUST00000071780 3125 ntAPPRIS ALT2 TSL 5 BASIC4.12□□□□□ -1.75
Lire1P11260 Olfr836-203ENSMUST00000215981 5046 ntAPPRIS ALT2 TSL 5 BASIC4.12□□□□□ -1.75
Lire1P11260 Gm23014-201ENSMUST00000104144 130 ntBASIC4.12□□□□□ -1.75
Lire1P11260 Gm11009-201ENSMUST00000108961 417 ntAPPRIS P1 TSL 5 BASIC4.12□□□□□ -1.75
Lire1P11260 Ctps2-203ENSMUST00000112300 741 ntTSL 3 BASIC4.12□□□□□ -1.75
Lire1P11260 Gm6592-201ENSMUST00000115563 507 ntAPPRIS P1 TSL 5 BASIC4.12□□□□□ -1.75
Lire1P11260 Gm12062-201ENSMUST00000117533 259 ntBASIC4.12□□□□□ -1.75
Lire1P11260 Defa-ps15-201ENSMUST00000118178 477 ntBASIC4.12□□□□□ -1.75
Lire1P11260 Gm11693-201ENSMUST00000119625 565 ntBASIC4.12□□□□□ -1.75
Lire1P11260 Cldn34-ps-201ENSMUST00000145498 600 ntBASIC4.12□□□□□ -1.75
Lire1P11260 1700019E08Rik-202ENSMUST00000153567 635 ntTSL 1 (best) BASIC4.12□□□□□ -1.75
Lire1P11260 Gm20428-201ENSMUST00000174365 283 ntBASIC4.12□□□□□ -1.75
Lire1P11260 Gm4761-201ENSMUST00000178086 582 ntBASIC4.12□□□□□ -1.75
Lire1P11260 Gm19131-201ENSMUST00000203408 789 ntBASIC4.12□□□□□ -1.75
Lire1P11260 AC154241.1-201ENSMUST00000223952 356 ntBASIC4.12□□□□□ -1.75
Lire1P11260 AC154788.1-201ENSMUST00000225003 340 ntBASIC4.12□□□□□ -1.75
Lire1P11260 CT572983.1-201ENSMUST00000226895 514 ntBASIC4.12□□□□□ -1.75
Lire1P11260 H2al3-201ENSMUST00000057113 553 ntAPPRIS P1 BASIC4.12□□□□□ -1.75
Lire1P11260 Olfr832-201ENSMUST00000060601 939 ntAPPRIS P1 BASIC4.12□□□□□ -1.75
Lire1P11260 Olfr1204-201ENSMUST00000078631 930 ntAPPRIS P1 BASIC4.12□□□□□ -1.75
Lire1P11260 Gm23300-201ENSMUST00000082712 125 ntBASIC4.12□□□□□ -1.75
Lire1P11260 Olfr834-201ENSMUST00000086492 939 ntAPPRIS P1 BASIC4.12□□□□□ -1.75
Lire1P11260 Obp1a-201ENSMUST00000088201 757 ntAPPRIS P1 TSL 1 (best) BASIC4.12□□□□□ -1.75
Lire1P11260 n-R5s152-201ENSMUST00000093641 119 ntBASIC4.12□□□□□ -1.75
Lire1P11260 Olfr1535-202ENSMUST00000217519 3959 ntAPPRIS P1 TSL 5 BASIC4.12□□□□□ -1.75
Lire1P11260 Mannr-201ENSMUST00000193549 1438 ntTSL 1 (best) BASIC4.12□□□□□ -1.75
Lire1P11260 Crisp3-201ENSMUST00000026499 1417 ntAPPRIS P1 TSL 1 (best) BASIC4.12□□□□□ -1.75
Lire1P11260 Olfr714-203ENSMUST00000214429 4324 ntAPPRIS P1 TSL 5 BASIC4.12□□□□□ -1.75
Lire1P11260 Gm6300-201ENSMUST00000192393 1498 ntBASIC4.11□□□□□ -1.75
Lire1P11260 Mcmdc2-203ENSMUST00000125294 2003 ntTSL 5 BASIC4.11□□□□□ -1.75
Retrieved 100 of 76,532 protein–RNA pairs in 89.1 ms