Protein–RNA interactions for Protein: P0C0A3

Chmp6, Charged multivesicular body protein 6, mousemouse

Predictions only

Length 200 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chmp6P0C0A3 Gm14696-201ENSMUST00000144294 3976 ntTSL 1 (best) BASIC3.95□□□□□ -1.78
Chmp6P0C0A3 Gm37204-201ENSMUST00000192389 3961 ntBASIC3.95□□□□□ -1.78
Chmp6P0C0A3 Olfr1184-202ENSMUST00000216675 3164 ntAPPRIS P1 TSL 5 BASIC3.95□□□□□ -1.78
Chmp6P0C0A3 Macf1-206ENSMUST00000106224 23402 ntAPPRIS ALT2 TSL 5 BASIC3.95□□□□□ -1.78
Chmp6P0C0A3 Olfr912-201ENSMUST00000217160 5726 ntAPPRIS P1 TSL 2 BASIC3.95□□□□□ -1.78
Chmp6P0C0A3 Gm45848-201ENSMUST00000212932 1871 ntTSL 5 BASIC3.95□□□□□ -1.78
Chmp6P0C0A3 Serpinb3c-201ENSMUST00000027565 1659 ntAPPRIS P1 TSL 1 (best) BASIC3.95□□□□□ -1.78
Chmp6P0C0A3 Gm14308-203ENSMUST00000119149 1458 ntTSL 1 (best) BASIC3.95□□□□□ -1.78
Chmp6P0C0A3 Gm14434-202ENSMUST00000120959 1458 ntTSL 1 (best) BASIC3.95□□□□□ -1.78
Chmp6P0C0A3 Oog1-203ENSMUST00000222332 1464 ntAPPRIS ALT2 TSL 5 BASIC3.95□□□□□ -1.78
Chmp6P0C0A3 Gm3089-201ENSMUST00000200804 1395 ntBASIC3.95□□□□□ -1.78
Chmp6P0C0A3 Gm3302-201ENSMUST00000201462 1395 ntBASIC3.95□□□□□ -1.78
Chmp6P0C0A3 Gm10377-201ENSMUST00000100695 899 ntAPPRIS P1 TSL 1 (best) BASIC3.95□□□□□ -1.78
Chmp6P0C0A3 Bsph2-201ENSMUST00000108526 532 ntAPPRIS P1 TSL 1 (best) BASIC3.95□□□□□ -1.78
Chmp6P0C0A3 Gm3676-201ENSMUST00000111869 899 ntAPPRIS P1 TSL 3 BASIC3.95□□□□□ -1.78
Chmp6P0C0A3 Gm3543-201ENSMUST00000111870 899 ntAPPRIS P1 TSL 3 BASIC3.95□□□□□ -1.78
Chmp6P0C0A3 Gm22488-201ENSMUST00000116811 127 ntBASIC3.95□□□□□ -1.78
Chmp6P0C0A3 Gm15387-201ENSMUST00000120421 648 ntBASIC3.95□□□□□ -1.78
Chmp6P0C0A3 Gm11404-201ENSMUST00000120872 494 ntBASIC3.95□□□□□ -1.78
Chmp6P0C0A3 Gm14986-201ENSMUST00000121262 1002 ntBASIC3.95□□□□□ -1.78
Chmp6P0C0A3 Gm25292-201ENSMUST00000122797 322 ntBASIC3.95□□□□□ -1.78
Chmp6P0C0A3 Gm24244-201ENSMUST00000157317 130 ntBASIC3.95□□□□□ -1.78
Chmp6P0C0A3 Gm25058-201ENSMUST00000157365 128 ntBASIC3.95□□□□□ -1.78
Chmp6P0C0A3 R3hcc1l-202ENSMUST00000160107 950 ntAPPRIS ALT2 TSL 2 BASIC3.95□□□□□ -1.78
Chmp6P0C0A3 Gm3573-201ENSMUST00000168673 898 ntAPPRIS P1 TSL 5 BASIC3.95□□□□□ -1.78
Chmp6P0C0A3 Gm10376-202ENSMUST00000169756 900 ntAPPRIS P5 TSL 1 (best) BASIC3.95□□□□□ -1.78
Chmp6P0C0A3 Hmgb1-ps7-201ENSMUST00000173370 648 ntBASIC3.95□□□□□ -1.78
Chmp6P0C0A3 Gm20399-201ENSMUST00000174652 132 ntBASIC3.95□□□□□ -1.78
Chmp6P0C0A3 Gm26871-205ENSMUST00000181926 742 ntTSL 3 BASIC3.95□□□□□ -1.78
Chmp6P0C0A3 Gm27025-201ENSMUST00000182392 942 ntBASIC3.95□□□□□ -1.78
Chmp6P0C0A3 Gm27445-201ENSMUST00000184484 72 ntBASIC3.95□□□□□ -1.78
Chmp6P0C0A3 Gm37698-201ENSMUST00000192605 463 ntBASIC3.95□□□□□ -1.78
Chmp6P0C0A3 Gm43236-201ENSMUST00000197414 313 ntTSL 5 BASIC3.95□□□□□ -1.78
Chmp6P0C0A3 1700016F12Rik-201ENSMUST00000198159 655 ntTSL 1 (best) BASIC3.95□□□□□ -1.78
Chmp6P0C0A3 Gm3143-202ENSMUST00000198364 675 ntTSL 2 BASIC3.95□□□□□ -1.78
Chmp6P0C0A3 Gm44724-202ENSMUST00000208251 531 ntTSL 5 BASIC3.95□□□□□ -1.78
Chmp6P0C0A3 Olfr840-ps1-201ENSMUST00000211827 917 ntBASIC3.95□□□□□ -1.78
Chmp6P0C0A3 AC091783.4-201ENSMUST00000224940 611 ntBASIC3.95□□□□□ -1.78
Chmp6P0C0A3 Gm26064-201ENSMUST00000083381 109 ntBASIC3.95□□□□□ -1.78
Chmp6P0C0A3 Mir133a-2-201ENSMUST00000083526 104 ntBASIC3.95□□□□□ -1.78
Chmp6P0C0A3 Gm5518-201ENSMUST00000084171 648 ntBASIC3.95□□□□□ -1.78
Chmp6P0C0A3 Olfr1220-201ENSMUST00000099789 1026 ntAPPRIS P1 BASIC3.95□□□□□ -1.78
Chmp6P0C0A3 Olfr1220-202ENSMUST00000099806 1201 ntAPPRIS P1 TSL 3 BASIC3.95□□□□□ -1.78
Chmp6P0C0A3 Pik3c2a-201ENSMUST00000170430 8044 ntAPPRIS P1 TSL 5 BASIC3.95□□□□□ -1.78
Chmp6P0C0A3 AC132336.1-201ENSMUST00000222844 1740 ntBASIC3.95□□□□□ -1.78
Chmp6P0C0A3 Olfr765-202ENSMUST00000216460 2594 ntAPPRIS P1 TSL 5 BASIC3.95□□□□□ -1.78
Chmp6P0C0A3 Cpa3-201ENSMUST00000001921 1449 ntAPPRIS P1 TSL 1 (best) BASIC3.95□□□□□ -1.78
Chmp6P0C0A3 Olfr679-202ENSMUST00000214328 5184 ntAPPRIS P1 TSL 5 BASIC3.94□□□□□ -1.78
Chmp6P0C0A3 Olfr736-202ENSMUST00000213402 2402 ntAPPRIS P1 TSL 5 BASIC3.94□□□□□ -1.78
Chmp6P0C0A3 Rab27b-203ENSMUST00000121693 6891 ntAPPRIS P1 TSL 1 (best) BASIC3.94□□□□□ -1.78
Chmp6P0C0A3 Cp-201ENSMUST00000003714 4092 ntAPPRIS ALT2 TSL 1 (best) BASIC3.94□□□□□ -1.78
Chmp6P0C0A3 Fsip2-203ENSMUST00000143764 21116 ntAPPRIS P1 TSL 5 BASIC3.94□□□□□ -1.78
Chmp6P0C0A3 Olfr105-ps-202ENSMUST00000215518 3778 ntAPPRIS P1 TSL 5 BASIC3.94□□□□□ -1.78
Chmp6P0C0A3 Spc25-201ENSMUST00000005365 1352 ntAPPRIS ALT2 TSL 1 (best) BASIC3.94□□□□□ -1.78
Chmp6P0C0A3 Gm25833-201ENSMUST00000104137 133 ntBASIC3.94□□□□□ -1.78
Chmp6P0C0A3 Gm15268-201ENSMUST00000118845 352 ntBASIC3.94□□□□□ -1.78
Chmp6P0C0A3 Gm11746-201ENSMUST00000119843 821 ntBASIC3.94□□□□□ -1.78
Chmp6P0C0A3 Sult1b1-203ENSMUST00000120150 1213 ntAPPRIS P1 TSL 1 (best) BASIC3.94□□□□□ -1.78
Chmp6P0C0A3 Gm14435-202ENSMUST00000127687 1127 ntAPPRIS ALT2 TSL 1 (best) BASIC3.94□□□□□ -1.78
Chmp6P0C0A3 Sox5it-201ENSMUST00000144026 1207 ntTSL 1 (best) BASIC3.94□□□□□ -1.78
Chmp6P0C0A3 Gm8224-201ENSMUST00000166178 497 ntBASIC3.94□□□□□ -1.78
Chmp6P0C0A3 Gm3646-201ENSMUST00000171319 352 ntAPPRIS P1 TSL 1 (best) BASIC3.94□□□□□ -1.78
Chmp6P0C0A3 Ang-ps2-201ENSMUST00000178173 433 ntBASIC3.94□□□□□ -1.78
Chmp6P0C0A3 Gm14527-201ENSMUST00000179300 639 ntBASIC3.94□□□□□ -1.78
Chmp6P0C0A3 2310001H17Rik-201ENSMUST00000180379 521 ntTSL 2 BASIC3.94□□□□□ -1.78
Chmp6P0C0A3 Rp31-ps19-201ENSMUST00000180929 353 ntBASIC3.94□□□□□ -1.78
Chmp6P0C0A3 Otx2os1-201ENSMUST00000183522 866 ntTSL 3 BASIC3.94□□□□□ -1.78
Chmp6P0C0A3 Gm37021-201ENSMUST00000195835 663 ntTSL 5 BASIC3.94□□□□□ -1.78
Chmp6P0C0A3 Gm43601-201ENSMUST00000196294 945 ntBASIC3.94□□□□□ -1.78
Chmp6P0C0A3 Csn1s2a-209ENSMUST00000200322 797 ntAPPRIS ALT2 TSL 2 BASIC3.94□□□□□ -1.78
Chmp6P0C0A3 Gm18861-201ENSMUST00000202509 1186 ntBASIC3.94□□□□□ -1.78
Chmp6P0C0A3 4930587E11Rik-202ENSMUST00000204857 807 ntTSL 1 (best) BASIC3.94□□□□□ -1.78
Chmp6P0C0A3 Gm4263-202ENSMUST00000221392 667 ntBASIC3.94□□□□□ -1.78
Chmp6P0C0A3 Gm12582-201ENSMUST00000030555 697 ntBASIC3.94□□□□□ -1.78
Chmp6P0C0A3 Gm25592-201ENSMUST00000082635 131 ntBASIC3.94□□□□□ -1.78
Chmp6P0C0A3 Olfr1046-201ENSMUST00000099902 951 ntAPPRIS P1 BASIC3.94□□□□□ -1.78
Chmp6P0C0A3 Gm15356-201ENSMUST00000140669 2741 ntTSL 1 (best) BASIC3.94□□□□□ -1.78
Chmp6P0C0A3 D3Ertd254e-201ENSMUST00000165956 6503 ntTSL 3 BASIC3.94□□□□□ -1.78
Chmp6P0C0A3 Kctd4-201ENSMUST00000050120 3998 ntAPPRIS P1 TSL 1 (best) BASIC3.94□□□□□ -1.78
Chmp6P0C0A3 Gm19335-201ENSMUST00000195836 2069 ntBASIC3.94□□□□□ -1.78
Chmp6P0C0A3 Gm43870-201ENSMUST00000205102 4369 ntBASIC3.93□□□□□ -1.78
Chmp6P0C0A3 Olfr665-204ENSMUST00000216971 3248 ntAPPRIS P1 TSL 5 BASIC3.93□□□□□ -1.78
Chmp6P0C0A3 Skint3-202ENSMUST00000170945 3843 ntAPPRIS ALT2 TSL 1 (best) BASIC3.93□□□□□ -1.78
Chmp6P0C0A3 Gm44288-201ENSMUST00000205061 2795 ntBASIC3.93□□□□□ -1.78
Chmp6P0C0A3 Gm7470-201ENSMUST00000194219 2095 ntBASIC3.93□□□□□ -1.78
Chmp6P0C0A3 Igkv1-131-201ENSMUST00000103306 362 ntAPPRIS P1 BASIC3.93□□□□□ -1.78
Chmp6P0C0A3 Gm12788-201ENSMUST00000119090 308 ntBASIC3.93□□□□□ -1.78
Chmp6P0C0A3 Gm12335-201ENSMUST00000119738 327 ntBASIC3.93□□□□□ -1.78
Chmp6P0C0A3 Gm15860-202ENSMUST00000137257 506 ntTSL 3 BASIC3.93□□□□□ -1.78
Chmp6P0C0A3 Platr32-201ENSMUST00000148597 394 ntTSL 5 BASIC3.93□□□□□ -1.78
Chmp6P0C0A3 Gm24059-201ENSMUST00000157493 312 ntBASIC3.93□□□□□ -1.78
Chmp6P0C0A3 Gm6486-201ENSMUST00000166202 434 ntBASIC3.93□□□□□ -1.78
Chmp6P0C0A3 Gm20526-201ENSMUST00000173416 158 ntBASIC3.93□□□□□ -1.78
Chmp6P0C0A3 Gm27903-201ENSMUST00000175482 126 ntBASIC3.93□□□□□ -1.78
Chmp6P0C0A3 Obox4-ps8-201ENSMUST00000175831 714 ntBASIC3.93□□□□□ -1.78
Chmp6P0C0A3 Ang-ps3-201ENSMUST00000177964 433 ntBASIC3.93□□□□□ -1.78
Chmp6P0C0A3 Gm27952-201ENSMUST00000184748 105 ntBASIC3.93□□□□□ -1.78
Chmp6P0C0A3 Rhoay-ps1-201ENSMUST00000191243 581 ntBASIC3.93□□□□□ -1.78
Chmp6P0C0A3 Gm7041-201ENSMUST00000201227 524 ntBASIC3.93□□□□□ -1.78
Chmp6P0C0A3 Gm7407-201ENSMUST00000208301 568 ntBASIC3.93□□□□□ -1.78
Retrieved 100 of 76,532 protein–RNA pairs in 112.2 ms