Protein–RNA interactions for Protein: P09027

Hoxd3, Homeobox protein Hox-D3, mousemouse

Predictions only

Length 433 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hoxd3P09027 AC132324.1-201ENSMUST00000221855 584 ntTSL 5 BASIC4.78□□□□□ -1.64
Hoxd3P09027 Gm6474-201ENSMUST00000223250 699 ntBASIC4.78□□□□□ -1.64
Hoxd3P09027 AC101945.1-201ENSMUST00000226734 466 ntBASIC4.78□□□□□ -1.64
Hoxd3P09027 AC114572.1-201ENSMUST00000227262 300 ntBASIC4.78□□□□□ -1.64
Hoxd3P09027 AC166105.1-201ENSMUST00000227512 482 ntBASIC4.78□□□□□ -1.64
Hoxd3P09027 S100a11-201ENSMUST00000029515 511 ntAPPRIS P1 TSL 1 (best) BASIC4.78□□□□□ -1.64
Hoxd3P09027 Gm25081-201ENSMUST00000082534 108 ntBASIC4.78□□□□□ -1.64
Hoxd3P09027 Gm22628-201ENSMUST00000082988 107 ntBASIC4.78□□□□□ -1.64
Hoxd3P09027 Gml-201ENSMUST00000096400 957 ntAPPRIS P1 TSL 1 (best) BASIC4.78□□□□□ -1.64
Hoxd3P09027 Zfp2-202ENSMUST00000109129 2803 ntAPPRIS P1 TSL 1 (best) BASIC4.78□□□□□ -1.64
Hoxd3P09027 Olfr348-204ENSMUST00000215199 3557 ntAPPRIS P1 TSL 3 BASIC4.78□□□□□ -1.64
Hoxd3P09027 Nxpe2-201ENSMUST00000034527 3366 ntAPPRIS P1 TSL 1 (best) BASIC4.78□□□□□ -1.64
Hoxd3P09027 Gm5427-201ENSMUST00000217680 2591 ntTSL 1 (best) BASIC4.78□□□□□ -1.64
Hoxd3P09027 A730017L22Rik-201ENSMUST00000128176 3055 ntTSL 1 (best) BASIC4.78□□□□□ -1.64
Hoxd3P09027 Gm8822-201ENSMUST00000118948 2347 ntBASIC4.78□□□□□ -1.64
Hoxd3P09027 Gabra6-202ENSMUST00000109286 1554 ntAPPRIS ALT2 TSL 5 BASIC4.78□□□□□ -1.64
Hoxd3P09027 Mecom-212ENSMUST00000173495 5066 ntAPPRIS P5 TSL 5 BASIC4.78□□□□□ -1.64
Hoxd3P09027 Ceacam2-201ENSMUST00000044547 2844 ntAPPRIS P1 TSL 5 BASIC4.78□□□□□ -1.65
Hoxd3P09027 Kif9-203ENSMUST00000197248 3184 ntTSL 1 (best) BASIC4.77□□□□□ -1.65
Hoxd3P09027 Gm5886-203ENSMUST00000203983 2613 ntTSL 1 (best) BASIC4.77□□□□□ -1.65
Hoxd3P09027 Gm10441-201ENSMUST00000200950 1546 ntTSL 1 (best) BASIC4.77□□□□□ -1.65
Hoxd3P09027 Synrg-208ENSMUST00000183714 3651 ntAPPRIS ALT2 TSL 5 BASIC4.77□□□□□ -1.65
Hoxd3P09027 Trpm3-204ENSMUST00000099564 3653 ntTSL 1 (best) BASIC4.77□□□□□ -1.65
Hoxd3P09027 Xpo1-203ENSMUST00000102870 3471 ntAPPRIS P1 TSL 5 BASIC4.77□□□□□ -1.65
Hoxd3P09027 Gm44039-201ENSMUST00000204192 2246 ntBASIC4.77□□□□□ -1.65
Hoxd3P09027 Pcdh15-222ENSMUST00000147189 6806 ntAPPRIS ALT2 TSL 1 (best) BASIC4.77□□□□□ -1.65
Hoxd3P09027 Olfr204-202ENSMUST00000216261 5371 ntAPPRIS P1 TSL 3 BASIC4.77□□□□□ -1.65
Hoxd3P09027 9830004L10Rik-201ENSMUST00000185548 2177 ntTSL 1 (best) BASIC4.77□□□□□ -1.65
Hoxd3P09027 Cep112os1-201ENSMUST00000137907 3005 ntTSL 1 (best) BASIC4.77□□□□□ -1.65
Hoxd3P09027 Olfr857-202ENSMUST00000212013 2306 ntAPPRIS P1 TSL 3 BASIC4.77□□□□□ -1.65
Hoxd3P09027 Zbbx-203ENSMUST00000107776 1978 ntAPPRIS ALT2 TSL 5 BASIC4.77□□□□□ -1.65
Hoxd3P09027 Olfr104-ps-201ENSMUST00000178766 1972 ntAPPRIS ALT2 TSL 5 BASIC4.77□□□□□ -1.65
Hoxd3P09027 Gm38372-201ENSMUST00000194854 4028 ntBASIC4.77□□□□□ -1.65
Hoxd3P09027 Dnah2-201ENSMUST00000035539 13569 ntAPPRIS ALT2 TSL 5 BASIC4.77□□□□□ -1.65
Hoxd3P09027 AW554918-208ENSMUST00000165400 5351 ntAPPRIS ALT2 TSL 5 BASIC4.77□□□□□ -1.65
Hoxd3P09027 AW554918-202ENSMUST00000097643 5351 ntAPPRIS ALT2 TSL 5 BASIC4.77□□□□□ -1.65
Hoxd3P09027 Igkv12-38-201ENSMUST00000103371 344 ntAPPRIS ALT2 BASIC4.77□□□□□ -1.65
Hoxd3P09027 Gm3020-201ENSMUST00000112801 450 ntTSL 5 BASIC4.77□□□□□ -1.65
Hoxd3P09027 Stk36-203ENSMUST00000113694 629 ntTSL 1 (best) BASIC4.77□□□□□ -1.65
Hoxd3P09027 Gm13193-201ENSMUST00000117275 225 ntBASIC4.77□□□□□ -1.65
Hoxd3P09027 Gm15332-201ENSMUST00000118386 357 ntBASIC4.77□□□□□ -1.65
Hoxd3P09027 Gm12244-201ENSMUST00000119500 291 ntBASIC4.77□□□□□ -1.65
Hoxd3P09027 Rpl31-ps6-201ENSMUST00000119959 378 ntBASIC4.77□□□□□ -1.65
Hoxd3P09027 Gm11430-201ENSMUST00000121317 217 ntBASIC4.77□□□□□ -1.65
Hoxd3P09027 Gm27926-201ENSMUST00000157180 66 ntBASIC4.77□□□□□ -1.65
Hoxd3P09027 Gm16326-201ENSMUST00000162843 414 ntBASIC4.77□□□□□ -1.65
Hoxd3P09027 Gm20545-201ENSMUST00000174739 210 ntBASIC4.77□□□□□ -1.65
Hoxd3P09027 Gm25246-201ENSMUST00000175476 69 ntBASIC4.77□□□□□ -1.65
Hoxd3P09027 Gm25065-201ENSMUST00000177914 132 ntBASIC4.77□□□□□ -1.65
Hoxd3P09027 Gm25891-201ENSMUST00000180050 132 ntBASIC4.77□□□□□ -1.65
Hoxd3P09027 Gm27624-201ENSMUST00000185047 177 ntBASIC4.77□□□□□ -1.65
Hoxd3P09027 Mir6361-201ENSMUST00000185079 101 ntBASIC4.77□□□□□ -1.65
Hoxd3P09027 Scgb3a2-203ENSMUST00000189750 578 ntTSL 1 (best) BASIC4.77□□□□□ -1.65
Hoxd3P09027 Gm8242-202ENSMUST00000193056 475 ntBASIC4.77□□□□□ -1.65
Hoxd3P09027 Mir3535-201ENSMUST00000197651 147 ntBASIC4.77□□□□□ -1.65
Hoxd3P09027 Gm42579-201ENSMUST00000200512 734 ntBASIC4.77□□□□□ -1.65
Hoxd3P09027 Gm20144-201ENSMUST00000203031 165 ntBASIC4.77□□□□□ -1.65
Hoxd3P09027 Gm6112-201ENSMUST00000208037 629 ntBASIC4.77□□□□□ -1.65
Hoxd3P09027 Gm34350-201ENSMUST00000208898 481 ntTSL 5 BASIC4.77□□□□□ -1.65
Hoxd3P09027 AC131654.1-201ENSMUST00000219675 745 ntBASIC4.77□□□□□ -1.65
Hoxd3P09027 1700048P04Rik-201ENSMUST00000219825 369 ntTSL 3 BASIC4.77□□□□□ -1.65
Hoxd3P09027 Gm30624-201ENSMUST00000220039 628 ntTSL 3 BASIC4.77□□□□□ -1.65
Hoxd3P09027 Gm8526-201ENSMUST00000079153 475 ntBASIC4.77□□□□□ -1.65
Hoxd3P09027 Gm22300-201ENSMUST00000082661 126 ntBASIC4.77□□□□□ -1.65
Hoxd3P09027 Gm22126-201ENSMUST00000083244 142 ntBASIC4.77□□□□□ -1.65
Hoxd3P09027 Snora30-201ENSMUST00000083325 130 ntBASIC4.77□□□□□ -1.65
Hoxd3P09027 Olfr1090-201ENSMUST00000099875 942 ntAPPRIS P1 BASIC4.77□□□□□ -1.65
Hoxd3P09027 Celf2-201ENSMUST00000002176 7718 ntAPPRIS P3 TSL 1 (best) BASIC4.77□□□□□ -1.65
Hoxd3P09027 Zan-201ENSMUST00000117564 16481 ntAPPRIS P1 TSL 5 BASIC4.77□□□□□ -1.65
Hoxd3P09027 AC159006.2-201ENSMUST00000228734 4144 ntBASIC4.77□□□□□ -1.65
Hoxd3P09027 Pot1a-201ENSMUST00000115327 2447 ntTSL 1 (best) BASIC4.77□□□□□ -1.65
Hoxd3P09027 Vmn2r46-201ENSMUST00000171523 2430 ntAPPRIS P1 TSL 5 BASIC4.77□□□□□ -1.65
Hoxd3P09027 Gm20655-202ENSMUST00000181428 2946 ntTSL 1 (best) BASIC4.77□□□□□ -1.65
Hoxd3P09027 Gm43637-201ENSMUST00000202206 2926 ntBASIC4.77□□□□□ -1.65
Hoxd3P09027 Gm43389-201ENSMUST00000196080 2595 ntBASIC4.77□□□□□ -1.65
Hoxd3P09027 Zkscan8-204ENSMUST00000224362 6954 ntAPPRIS ALT2 BASIC4.77□□□□□ -1.65
Hoxd3P09027 Fat1-203ENSMUST00000189017 14651 ntTSL 5 BASIC4.77□□□□□ -1.65
Hoxd3P09027 Olfr344-202ENSMUST00000215879 7675 ntAPPRIS P1 TSL 5 BASIC4.77□□□□□ -1.65
Hoxd3P09027 Vmn1r63-201ENSMUST00000075085 2172 ntAPPRIS P1 TSL 1 (best) BASIC4.77□□□□□ -1.65
Hoxd3P09027 Jade3-202ENSMUST00000115384 4866 ntAPPRIS P2 TSL 1 (best) BASIC4.77□□□□□ -1.65
Hoxd3P09027 Nae1-201ENSMUST00000034349 1808 ntAPPRIS P1 TSL 1 (best) BASIC4.76□□□□□ -1.65
Hoxd3P09027 Ikzf2-201ENSMUST00000027146 9278 ntAPPRIS P1 TSL 1 (best) BASIC4.76□□□□□ -1.65
Hoxd3P09027 Gm38085-201ENSMUST00000195785 3062 ntBASIC4.76□□□□□ -1.65
Hoxd3P09027 Olfr1180-203ENSMUST00000217320 2107 ntAPPRIS P1 TSL 5 BASIC4.76□□□□□ -1.65
Hoxd3P09027 Slc17a2-201ENSMUST00000006786 4629 ntAPPRIS P2 TSL 1 (best) BASIC4.76□□□□□ -1.65
Hoxd3P09027 AC124516.1-201ENSMUST00000221845 3544 ntBASIC4.76□□□□□ -1.65
Hoxd3P09027 Gm15354-201ENSMUST00000132019 1772 ntTSL 1 (best) BASIC4.76□□□□□ -1.65
Hoxd3P09027 Hmgn5-201ENSMUST00000033597 1934 ntAPPRIS P1 TSL 1 (best) BASIC4.76□□□□□ -1.65
Hoxd3P09027 Vmn1r203-202ENSMUST00000227520 8227 ntAPPRIS P1 BASIC4.76□□□□□ -1.65
Hoxd3P09027 Hephl1-201ENSMUST00000159985 5261 ntAPPRIS P1 TSL 5 BASIC4.76□□□□□ -1.65
Hoxd3P09027 Gm12185-202ENSMUST00000094476 5264 ntAPPRIS P1 TSL 5 BASIC4.76□□□□□ -1.65
Hoxd3P09027 Gm37137-201ENSMUST00000195138 2684 ntBASIC4.76□□□□□ -1.65
Hoxd3P09027 AC108802.1-201ENSMUST00000219501 3142 ntBASIC4.76□□□□□ -1.65
Hoxd3P09027 Mir541-201ENSMUST00000102097 90 ntBASIC4.76□□□□□ -1.65
Hoxd3P09027 Igkv6-23-201ENSMUST00000103386 369 ntAPPRIS P1 BASIC4.76□□□□□ -1.65
Hoxd3P09027 Gm25917-201ENSMUST00000104267 130 ntBASIC4.76□□□□□ -1.65
Hoxd3P09027 Gm23440-201ENSMUST00000104299 130 ntBASIC4.76□□□□□ -1.65
Hoxd3P09027 Gm14890-201ENSMUST00000117660 676 ntBASIC4.76□□□□□ -1.65
Hoxd3P09027 Gm7657-201ENSMUST00000118851 666 ntBASIC4.76□□□□□ -1.65
Hoxd3P09027 Rps13-ps8-201ENSMUST00000118906 401 ntBASIC4.76□□□□□ -1.65
Retrieved 100 of 76,532 protein–RNA pairs in 75.1 ms