Protein–RNA interactions for Protein: O55187

Cbx4, E3 SUMO-protein ligase CBX4, mousemouse

Predictions only

Length 551 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cbx4O55187 Gm15108-201ENSMUST00000116160 803 ntBASIC4.23□□□□□ -1.73
Cbx4O55187 Gm12598-201ENSMUST00000117333 830 ntBASIC4.23□□□□□ -1.73
Cbx4O55187 Gm14628-201ENSMUST00000117508 635 ntBASIC4.23□□□□□ -1.73
Cbx4O55187 Gm12067-201ENSMUST00000119755 1148 ntBASIC4.23□□□□□ -1.73
Cbx4O55187 Rab9b-ps1-201ENSMUST00000119785 606 ntBASIC4.23□□□□□ -1.73
Cbx4O55187 Gm11398-201ENSMUST00000120330 320 ntBASIC4.23□□□□□ -1.73
Cbx4O55187 Gm13371-201ENSMUST00000137756 469 ntTSL 1 (best) BASIC4.23□□□□□ -1.73
Cbx4O55187 Gm23023-201ENSMUST00000158767 109 ntBASIC4.23□□□□□ -1.73
Cbx4O55187 Gm17421-201ENSMUST00000167845 674 ntBASIC4.23□□□□□ -1.73
Cbx4O55187 Gm17060-201ENSMUST00000172394 824 ntBASIC4.23□□□□□ -1.73
Cbx4O55187 Gm20689-201ENSMUST00000176033 279 ntBASIC4.23□□□□□ -1.73
Cbx4O55187 Il20-202ENSMUST00000188581 465 ntTSL 1 (best) BASIC4.23□□□□□ -1.73
Cbx4O55187 Gm28997-201ENSMUST00000188759 429 ntBASIC4.23□□□□□ -1.73
Cbx4O55187 Gm37571-201ENSMUST00000195048 614 ntTSL 3 BASIC4.23□□□□□ -1.73
Cbx4O55187 Gm43675-201ENSMUST00000199468 1184 ntBASIC4.23□□□□□ -1.73
Cbx4O55187 Csn2-209ENSMUST00000199624 890 ntAPPRIS P3 TSL 5 BASIC4.23□□□□□ -1.73
Cbx4O55187 Gm18452-201ENSMUST00000202968 1111 ntBASIC4.23□□□□□ -1.73
Cbx4O55187 Olfr778-ps1-201ENSMUST00000204517 207 ntBASIC4.23□□□□□ -1.73
Cbx4O55187 Gm45209-201ENSMUST00000207122 353 ntBASIC4.23□□□□□ -1.73
Cbx4O55187 Olfr496-ps1-201ENSMUST00000208862 915 ntBASIC4.23□□□□□ -1.73
Cbx4O55187 Olfr490-201ENSMUST00000210114 945 ntAPPRIS P1 BASIC4.23□□□□□ -1.73
Cbx4O55187 AL935138.1-201ENSMUST00000215309 196 ntBASIC4.23□□□□□ -1.73
Cbx4O55187 AC134537.3-201ENSMUST00000220154 503 ntTSL 3 BASIC4.23□□□□□ -1.73
Cbx4O55187 AC111044.1-201ENSMUST00000220206 555 ntTSL 5 BASIC4.23□□□□□ -1.73
Cbx4O55187 AC154552.4-201ENSMUST00000222171 151 ntBASIC4.23□□□□□ -1.73
Cbx4O55187 Tshb-201ENSMUST00000029450 605 ntAPPRIS P1 TSL 5 BASIC4.23□□□□□ -1.73
Cbx4O55187 Mecom-201ENSMUST00000061088 348 ntBASIC4.23□□□□□ -1.73
Cbx4O55187 Olfr773-201ENSMUST00000072976 936 ntAPPRIS P1 BASIC4.23□□□□□ -1.73
Cbx4O55187 Csn2-201ENSMUST00000082370 1117 ntAPPRIS ALT2 TSL 1 (best) BASIC4.23□□□□□ -1.73
Cbx4O55187 Gm12888-201ENSMUST00000097905 1181 ntAPPRIS P1 TSL 1 (best) BASIC4.23□□□□□ -1.73
Cbx4O55187 Olfr715b-202ENSMUST00000215713 3879 ntAPPRIS P1 TSL 5 BASIC4.23□□□□□ -1.73
Cbx4O55187 Gm42483-201ENSMUST00000197556 1742 ntBASIC4.23□□□□□ -1.73
Cbx4O55187 Gm45211-201ENSMUST00000206208 2650 ntBASIC4.23□□□□□ -1.73
Cbx4O55187 A530099J19Rik-201ENSMUST00000151029 2764 ntTSL 1 (best) BASIC4.23□□□□□ -1.73
Cbx4O55187 Olfr672-202ENSMUST00000213942 1490 ntAPPRIS P1 TSL 3 BASIC4.23□□□□□ -1.73
Cbx4O55187 3110080E11Rik-201ENSMUST00000210736 3477 ntBASIC4.23□□□□□ -1.73
Cbx4O55187 Gm13103-201ENSMUST00000094522 1833 ntAPPRIS P2 TSL 1 (best) BASIC4.23□□□□□ -1.73
Cbx4O55187 Gm37900-201ENSMUST00000195510 3805 ntBASIC4.23□□□□□ -1.73
Cbx4O55187 AC156025.1-201ENSMUST00000223597 3551 ntBASIC4.23□□□□□ -1.73
Cbx4O55187 Gm44567-201ENSMUST00000205645 2631 ntBASIC4.23□□□□□ -1.73
Cbx4O55187 Olfr1298-202ENSMUST00000208284 1563 ntAPPRIS P1 TSL 5 BASIC4.23□□□□□ -1.73
Cbx4O55187 Lrp1b-209ENSMUST00000185258 1874 ntTSL 5 BASIC4.22□□□□□ -1.73
Cbx4O55187 Vmn1r169-203ENSMUST00000227547 2322 ntAPPRIS P1 BASIC4.22□□□□□ -1.73
Cbx4O55187 Ccnb3-202ENSMUST00000115752 4554 ntAPPRIS P1 TSL 1 (best) BASIC4.22□□□□□ -1.73
Cbx4O55187 Stk-ps2-201ENSMUST00000051224 4667 ntTSL 2 BASIC4.22□□□□□ -1.73
Cbx4O55187 Gm26002-201ENSMUST00000101915 107 ntBASIC4.22□□□□□ -1.73
Cbx4O55187 Mir147-201ENSMUST00000102354 79 ntBASIC4.22□□□□□ -1.73
Cbx4O55187 Gm22591-201ENSMUST00000104243 106 ntBASIC4.22□□□□□ -1.73
Cbx4O55187 Gm14304-201ENSMUST00000117272 446 ntBASIC4.22□□□□□ -1.73
Cbx4O55187 Gm13550-201ENSMUST00000118185 525 ntBASIC4.22□□□□□ -1.73
Cbx4O55187 Gm13720-201ENSMUST00000120741 196 ntBASIC4.22□□□□□ -1.73
Cbx4O55187 Sult2a-ps2-201ENSMUST00000121135 405 ntBASIC4.22□□□□□ -1.73
Cbx4O55187 Gm23885-201ENSMUST00000122682 294 ntBASIC4.22□□□□□ -1.73
Cbx4O55187 Gm4487-201ENSMUST00000150617 442 ntBASIC4.22□□□□□ -1.73
Cbx4O55187 Gm24690-201ENSMUST00000157759 97 ntBASIC4.22□□□□□ -1.73
Cbx4O55187 Gm22555-201ENSMUST00000157801 62 ntBASIC4.22□□□□□ -1.73
Cbx4O55187 Gm25605-201ENSMUST00000158364 124 ntBASIC4.22□□□□□ -1.73
Cbx4O55187 1700016C15Rik-201ENSMUST00000016106 768 ntAPPRIS P1 TSL 1 (best) BASIC4.22□□□□□ -1.73
Cbx4O55187 Gm17571-201ENSMUST00000167906 90 ntAPPRIS P1 TSL 5 BASIC4.22□□□□□ -1.73
Cbx4O55187 Malat1-202ENSMUST00000173314 556 ntTSL 3 BASIC4.22□□□□□ -1.73
Cbx4O55187 Gm18354-201ENSMUST00000173515 1068 ntBASIC4.22□□□□□ -1.73
Cbx4O55187 Esp24-201ENSMUST00000180245 207 ntAPPRIS P1 TSL 5 BASIC4.22□□□□□ -1.73
Cbx4O55187 4933433F19Rik-201ENSMUST00000180571 1088 ntTSL 1 (best) BASIC4.22□□□□□ -1.73
Cbx4O55187 Gm29641-201ENSMUST00000188955 259 ntBASIC4.22□□□□□ -1.73
Cbx4O55187 Gm38061-201ENSMUST00000192490 365 ntBASIC4.22□□□□□ -1.73
Cbx4O55187 Gm37910-201ENSMUST00000194770 217 ntTSL 5 BASIC4.22□□□□□ -1.73
Cbx4O55187 Gm37418-201ENSMUST00000195031 274 ntBASIC4.22□□□□□ -1.73
Cbx4O55187 Gm43710-201ENSMUST00000199583 452 ntBASIC4.22□□□□□ -1.73
Cbx4O55187 Gm43825-201ENSMUST00000199650 734 ntBASIC4.22□□□□□ -1.73
Cbx4O55187 4930567H12Rik-204ENSMUST00000213085 801 ntTSL 1 (best) BASIC4.22□□□□□ -1.73
Cbx4O55187 AL772265.1-201ENSMUST00000214379 305 ntBASIC4.22□□□□□ -1.73
Cbx4O55187 Slfn5os-202ENSMUST00000216469 550 ntTSL 5 BASIC4.22□□□□□ -1.73
Cbx4O55187 AC153526.4-201ENSMUST00000217713 379 ntBASIC4.22□□□□□ -1.73
Cbx4O55187 4930442G10Rik-202ENSMUST00000221968 1096 ntTSL 5 BASIC4.22□□□□□ -1.73
Cbx4O55187 Gm3565-201ENSMUST00000222670 609 ntBASIC4.22□□□□□ -1.73
Cbx4O55187 Creg1-201ENSMUST00000040298 425 ntTSL 3 BASIC4.22□□□□□ -1.73
Cbx4O55187 H2al3-201ENSMUST00000057113 553 ntAPPRIS P1 BASIC4.22□□□□□ -1.73
Cbx4O55187 Olfr57-201ENSMUST00000082244 1080 ntAPPRIS P1 BASIC4.22□□□□□ -1.73
Cbx4O55187 1110057P08Rik-201ENSMUST00000089097 465 ntAPPRIS P1 BASIC4.22□□□□□ -1.73
Cbx4O55187 Gm10267-201ENSMUST00000091916 258 ntAPPRIS ALT2 TSL 5 BASIC4.22□□□□□ -1.73
Cbx4O55187 Olfr1297-201ENSMUST00000099612 939 ntAPPRIS P1 BASIC4.22□□□□□ -1.73
Cbx4O55187 Olfr1141-201ENSMUST00000099846 936 ntAPPRIS P1 BASIC4.22□□□□□ -1.73
Cbx4O55187 Gm35191-201ENSMUST00000200925 2475 ntTSL 1 (best) BASIC4.22□□□□□ -1.73
Cbx4O55187 Slfn9-202ENSMUST00000092840 3862 ntAPPRIS P1 TSL 5 BASIC4.22□□□□□ -1.73
Cbx4O55187 Gm15226-201ENSMUST00000156526 2971 ntTSL 1 (best) BASIC4.22□□□□□ -1.73
Cbx4O55187 Gm42680-201ENSMUST00000196238 2500 ntBASIC4.22□□□□□ -1.73
Cbx4O55187 Gm21037-201ENSMUST00000209086 2608 ntBASIC4.22□□□□□ -1.73
Cbx4O55187 Rps6ka3-204ENSMUST00000112493 3671 ntTSL 5 BASIC4.22□□□□□ -1.73
Cbx4O55187 Gm20139-202ENSMUST00000216041 3888 ntTSL 1 (best) BASIC4.21□□□□□ -1.73
Cbx4O55187 Gm37192-201ENSMUST00000194479 1348 ntBASIC4.21□□□□□ -1.73
Cbx4O55187 Elavl2-202ENSMUST00000102799 3840 ntTSL 1 (best) BASIC4.21□□□□□ -1.73
Cbx4O55187 Olfr102-202ENSMUST00000217590 2783 ntAPPRIS P1 TSL 5 BASIC4.21□□□□□ -1.73
Cbx4O55187 CAAA01194877.1-201ENSMUST00000213137 4233 ntBASIC4.21□□□□□ -1.74
Cbx4O55187 Cntn6-205ENSMUST00000162872 3467 ntAPPRIS P1 TSL 1 (best) BASIC4.21□□□□□ -1.74
Cbx4O55187 Olfr1316-202ENSMUST00000213696 4184 ntAPPRIS ALT1 TSL 5 BASIC4.21□□□□□ -1.74
Cbx4O55187 Gm21119-201ENSMUST00000178438 2522 ntAPPRIS P1 TSL 1 (best) BASIC4.21□□□□□ -1.74
Cbx4O55187 Gm10552-201ENSMUST00000113396 372 ntBASIC4.21□□□□□ -1.74
Cbx4O55187 Gm25773-201ENSMUST00000116718 127 ntBASIC4.21□□□□□ -1.74
Cbx4O55187 Hmgb1-ps2-201ENSMUST00000117548 636 ntBASIC4.21□□□□□ -1.74
Cbx4O55187 Gm13379-201ENSMUST00000118053 621 ntBASIC4.21□□□□□ -1.74
Retrieved 100 of 76,532 protein–RNA pairs in 101.1 ms