Protein–RNA interactions for Protein: D3YZU1

Shank1, SH3 and multiple ankyrin repeat domains protein 1, mousemouse

Predictions only

Length 2,167 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shank1D3YZU1 Platr3-201ENSMUST00000146980 412 ntTSL 1 (best) BASIC3.62□□□□□ -1.83
Shank1D3YZU1 Gm25185-201ENSMUST00000157754 96 ntBASIC3.62□□□□□ -1.83
Shank1D3YZU1 Gm22156-201ENSMUST00000158409 141 ntBASIC3.62□□□□□ -1.83
Shank1D3YZU1 Gm16236-201ENSMUST00000159588 379 ntBASIC3.62□□□□□ -1.83
Shank1D3YZU1 Cylc2-203ENSMUST00000166749 1297 ntAPPRIS P1 TSL 1 (best) BASIC3.62□□□□□ -1.83
Shank1D3YZU1 Rp31-ps19-201ENSMUST00000180929 353 ntBASIC3.62□□□□□ -1.83
Shank1D3YZU1 Gm28967-201ENSMUST00000187351 281 ntBASIC3.62□□□□□ -1.83
Shank1D3YZU1 Gm36259-201ENSMUST00000197340 392 ntBASIC3.62□□□□□ -1.83
Shank1D3YZU1 Gm43245-201ENSMUST00000197603 468 ntBASIC3.62□□□□□ -1.83
Shank1D3YZU1 4930459L07Rik-201ENSMUST00000199751 420 ntTSL 1 (best) BASIC3.62□□□□□ -1.83
Shank1D3YZU1 Gm45080-201ENSMUST00000206648 283 ntBASIC3.62□□□□□ -1.83
Shank1D3YZU1 Olfr1073-ps1-202ENSMUST00000215705 478 ntBASIC3.62□□□□□ -1.83
Shank1D3YZU1 Gm32300-201ENSMUST00000221735 515 ntBASIC3.62□□□□□ -1.83
Shank1D3YZU1 AC139750.2-201ENSMUST00000224424 386 ntBASIC3.62□□□□□ -1.83
Shank1D3YZU1 AC150560.2-201ENSMUST00000227208 171 ntBASIC3.62□□□□□ -1.83
Shank1D3YZU1 Muc16-201ENSMUST00000034653 1035 ntTSL 2 BASIC3.62□□□□□ -1.83
Shank1D3YZU1 Gm23628-201ENSMUST00000082464 173 ntBASIC3.62□□□□□ -1.83
Shank1D3YZU1 Tex47-202ENSMUST00000159546 1402 ntAPPRIS P1 TSL 1 (best) BASIC3.61□□□□□ -1.83
Shank1D3YZU1 Ccnb3-202ENSMUST00000115752 4554 ntAPPRIS P1 TSL 1 (best) BASIC3.61□□□□□ -1.83
Shank1D3YZU1 Efhc2-201ENSMUST00000026014 2554 ntAPPRIS P1 TSL 1 (best) BASIC3.61□□□□□ -1.83
Shank1D3YZU1 mt-Rnr2-201ENSMUST00000082390 1582 ntBASIC3.61□□□□□ -1.83
Shank1D3YZU1 Gm14295-202ENSMUST00000132883 2505 ntAPPRIS P1 TSL 5 BASIC3.61□□□□□ -1.83
Shank1D3YZU1 Mir669o-201ENSMUST00000103898 96 ntBASIC3.61□□□□□ -1.83
Shank1D3YZU1 Zfp931-202ENSMUST00000108924 962 ntAPPRIS P1 TSL 3 BASIC3.61□□□□□ -1.83
Shank1D3YZU1 Gm14399-203ENSMUST00000109059 703 ntTSL 1 (best) BASIC3.61□□□□□ -1.83
Shank1D3YZU1 Gm14399-205ENSMUST00000109062 626 ntTSL 5 BASIC3.61□□□□□ -1.83
Shank1D3YZU1 Xlr5a-202ENSMUST00000114520 867 ntAPPRIS P1 TSL 3 BASIC3.61□□□□□ -1.83
Shank1D3YZU1 Gm15126-201ENSMUST00000118631 833 ntBASIC3.61□□□□□ -1.83
Shank1D3YZU1 Gm11718-201ENSMUST00000119942 537 ntBASIC3.61□□□□□ -1.83
Shank1D3YZU1 Gm10059-201ENSMUST00000131139 171 ntBASIC3.61□□□□□ -1.83
Shank1D3YZU1 Zfp931-204ENSMUST00000131702 704 ntTSL 3 BASIC3.61□□□□□ -1.83
Shank1D3YZU1 Gm15860-202ENSMUST00000137257 506 ntTSL 3 BASIC3.61□□□□□ -1.83
Shank1D3YZU1 Gm6264-202ENSMUST00000162896 1217 ntBASIC3.61□□□□□ -1.83
Shank1D3YZU1 9130204L05Rik-201ENSMUST00000166173 489 ntAPPRIS P1 TSL 1 (best) BASIC3.61□□□□□ -1.83
Shank1D3YZU1 Gm18604-201ENSMUST00000172535 558 ntBASIC3.61□□□□□ -1.83
Shank1D3YZU1 Gm27828-201ENSMUST00000184108 119 ntBASIC3.61□□□□□ -1.83
Shank1D3YZU1 Gm27190-201ENSMUST00000184890 542 ntBASIC3.61□□□□□ -1.83
Shank1D3YZU1 1810007C17Rik-201ENSMUST00000187665 710 ntTSL 1 (best) BASIC3.61□□□□□ -1.83
Shank1D3YZU1 Gm17916-203ENSMUST00000189918 324 ntTSL 5 BASIC3.61□□□□□ -1.83
Shank1D3YZU1 2610012C04Rik-201ENSMUST00000193434 1023 ntBASIC3.61□□□□□ -1.83
Shank1D3YZU1 Traj57-202ENSMUST00000196977 63 ntAPPRIS P1 BASIC3.61□□□□□ -1.83
Shank1D3YZU1 Olfr241-ps1-201ENSMUST00000197024 633 ntBASIC3.61□□□□□ -1.83
Shank1D3YZU1 Gm43005-201ENSMUST00000199015 648 ntBASIC3.61□□□□□ -1.83
Shank1D3YZU1 1700027F06Rik-201ENSMUST00000203901 243 ntTSL 1 (best) BASIC3.61□□□□□ -1.83
Shank1D3YZU1 Gm45420-201ENSMUST00000211243 425 ntBASIC3.61□□□□□ -1.83
Shank1D3YZU1 Gm40271-201ENSMUST00000221752 422 ntTSL 3 BASIC3.61□□□□□ -1.83
Shank1D3YZU1 AC155305.1-201ENSMUST00000222207 319 ntBASIC3.61□□□□□ -1.83
Shank1D3YZU1 AC124433.2-201ENSMUST00000223867 291 ntBASIC3.61□□□□□ -1.83
Shank1D3YZU1 AC155167.1-201ENSMUST00000228931 614 ntBASIC3.61□□□□□ -1.83
Shank1D3YZU1 Zfp322a-201ENSMUST00000050101 4844 ntAPPRIS P1 TSL 1 (best) BASIC3.61□□□□□ -1.83
Shank1D3YZU1 Vmn2r107-201ENSMUST00000042090 2586 ntAPPRIS P1 TSL 5 BASIC3.61□□□□□ -1.83
Shank1D3YZU1 Vmn2r38-201ENSMUST00000108554 3663 ntAPPRIS P1 TSL 5 BASIC3.61□□□□□ -1.83
Shank1D3YZU1 Gm44587-201ENSMUST00000207399 1685 ntBASIC3.61□□□□□ -1.83
Shank1D3YZU1 Vmn1r34-204ENSMUST00000226999 3048 ntAPPRIS P1 BASIC3.61□□□□□ -1.83
Shank1D3YZU1 Olfr1263-202ENSMUST00000214382 4400 ntAPPRIS P1 TSL 5 BASIC3.61□□□□□ -1.83
Shank1D3YZU1 Csmd3-201ENSMUST00000100670 13022 ntAPPRIS P1 TSL 5 BASIC3.61□□□□□ -1.83
Shank1D3YZU1 Ccnb3-201ENSMUST00000056725 4475 ntAPPRIS P1 TSL 5 BASIC3.61□□□□□ -1.83
Shank1D3YZU1 Olfr753-ps1-201ENSMUST00000174025 3121 ntAPPRIS P1 TSL 3 BASIC3.61□□□□□ -1.83
Shank1D3YZU1 Cyp2c40-201ENSMUST00000160476 1803 ntAPPRIS P1 TSL 1 (best) BASIC3.61□□□□□ -1.83
Shank1D3YZU1 Gm19301-201ENSMUST00000174283 2210 ntTSL 1 (best) BASIC3.61□□□□□ -1.83
Shank1D3YZU1 Gm7988-201ENSMUST00000196623 2297 ntBASIC3.61□□□□□ -1.83
Shank1D3YZU1 Zfp72-202ENSMUST00000223163 4153 ntAPPRIS P1 TSL 5 BASIC3.61□□□□□ -1.83
Shank1D3YZU1 Gm45804-201ENSMUST00000212137 3435 ntBASIC3.61□□□□□ -1.83
Shank1D3YZU1 Vmn1r210-203ENSMUST00000226294 3500 ntAPPRIS P1 BASIC3.61□□□□□ -1.83
Shank1D3YZU1 Gm26522-201ENSMUST00000181565 1555 ntTSL 1 (best) BASIC3.61□□□□□ -1.83
Shank1D3YZU1 Gm17308-201ENSMUST00000181749 1997 ntTSL 1 (best) BASIC3.61□□□□□ -1.83
Shank1D3YZU1 Csnka2ip-202ENSMUST00000209382 2859 ntAPPRIS ALT2 TSL 5 BASIC3.61□□□□□ -1.83
Shank1D3YZU1 Il22ra2-201ENSMUST00000036564 2498 ntAPPRIS P1 TSL 1 (best) BASIC3.61□□□□□ -1.83
Shank1D3YZU1 Gm14403-201ENSMUST00000108940 774 ntTSL 5 BASIC3.61□□□□□ -1.83
Shank1D3YZU1 Gm4596-201ENSMUST00000117197 442 ntBASIC3.61□□□□□ -1.83
Shank1D3YZU1 Gm14007-201ENSMUST00000118288 210 ntBASIC3.61□□□□□ -1.83
Shank1D3YZU1 Olfr360-201ENSMUST00000120704 954 ntAPPRIS P1 BASIC3.61□□□□□ -1.83
Shank1D3YZU1 Gm15218-201ENSMUST00000131006 618 ntTSL 5 BASIC3.61□□□□□ -1.83
Shank1D3YZU1 Gm281-201ENSMUST00000144914 2952 ntAPPRIS P1 TSL 5 BASIC3.61□□□□□ -1.83
Shank1D3YZU1 Gm15200-201ENSMUST00000149950 410 ntTSL 2 BASIC3.61□□□□□ -1.83
Shank1D3YZU1 Gm22793-201ENSMUST00000157227 330 ntBASIC3.61□□□□□ -1.83
Shank1D3YZU1 Gm17732-201ENSMUST00000163259 821 ntAPPRIS P1 BASIC3.61□□□□□ -1.83
Shank1D3YZU1 Gm17154-201ENSMUST00000165748 431 ntBASIC3.61□□□□□ -1.83
Shank1D3YZU1 Gm24949-201ENSMUST00000183609 215 ntBASIC3.61□□□□□ -1.83
Shank1D3YZU1 1700029E06Rik-201ENSMUST00000189036 757 ntTSL 1 (best) BASIC3.61□□□□□ -1.83
Shank1D3YZU1 Gm36247-201ENSMUST00000211834 285 ntBASIC3.61□□□□□ -1.83
Shank1D3YZU1 AC124524.2-201ENSMUST00000223940 588 ntBASIC3.61□□□□□ -1.83
Shank1D3YZU1 AC168059.1-201ENSMUST00000225846 841 ntBASIC3.61□□□□□ -1.83
Shank1D3YZU1 Vmn1r24-202ENSMUST00000228315 891 ntAPPRIS P1 BASIC3.61□□□□□ -1.83
Shank1D3YZU1 Gngt1-201ENSMUST00000031673 1183 ntAPPRIS P1 TSL 1 (best) BASIC3.61□□□□□ -1.83
Shank1D3YZU1 Cox7b2-201ENSMUST00000050129 542 ntAPPRIS P1 TSL 1 (best) BASIC3.61□□□□□ -1.83
Shank1D3YZU1 Gm25582-201ENSMUST00000083412 110 ntBASIC3.61□□□□□ -1.83
Shank1D3YZU1 Olfr382-201ENSMUST00000092921 939 ntAPPRIS P1 BASIC3.61□□□□□ -1.83
Shank1D3YZU1 Vmn2r27-201ENSMUST00000100968 2574 ntAPPRIS P1 TSL 5 BASIC3.61□□□□□ -1.83
Shank1D3YZU1 Vmn1r171-206ENSMUST00000227386 2570 ntAPPRIS ALT2 BASIC3.61□□□□□ -1.83
Shank1D3YZU1 Ddx60-201ENSMUST00000070631 6535 ntAPPRIS P2 TSL 5 BASIC3.6□□□□□ -1.83
Shank1D3YZU1 Olfr1308-202ENSMUST00000207560 2093 ntAPPRIS P1 TSL 3 BASIC3.6□□□□□ -1.83
Shank1D3YZU1 Olfr376-203ENSMUST00000170592 3211 ntAPPRIS P3 TSL 2 BASIC3.6□□□□□ -1.83
Shank1D3YZU1 Vmn1r215-202ENSMUST00000228092 2790 ntAPPRIS P1 BASIC3.6□□□□□ -1.83
Shank1D3YZU1 AC113059.2-201ENSMUST00000213462 3016 ntBASIC3.6□□□□□ -1.83
Shank1D3YZU1 Gm26273-201ENSMUST00000104180 131 ntBASIC3.6□□□□□ -1.83
Shank1D3YZU1 Gm22590-201ENSMUST00000104247 128 ntBASIC3.6□□□□□ -1.83
Shank1D3YZU1 Gm7173-202ENSMUST00000114021 1083 ntAPPRIS ALT2 TSL 5 BASIC3.6□□□□□ -1.83
Shank1D3YZU1 Gm8475-201ENSMUST00000118211 526 ntBASIC3.6□□□□□ -1.83
Shank1D3YZU1 Gm11982-201ENSMUST00000121480 314 ntBASIC3.6□□□□□ -1.83
Retrieved 100 of 76,532 protein–RNA pairs in 97.7 ms