Protein–RNA interactions for Protein: A0A0B4J1K2

Trav9-4, T cell receptor alpha variable 9-4 (Fragment), mousemouse

Predictions only

Length 113 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav9-4A0A0B4J1K2 Snora7a-201ENSMUST00000082629 140 ntBASIC2.54□□□□□ -2
Trav9-4A0A0B4J1K2 Snora70-201ENSMUST00000083047 137 ntBASIC2.54□□□□□ -2
Trav9-4A0A0B4J1K2 Olfr1154-201ENSMUST00000099844 933 ntAPPRIS P1 BASIC2.54□□□□□ -2
Trav9-4A0A0B4J1K2 Tfpi-204ENSMUST00000111714 3614 ntTSL 1 (best) BASIC2.54□□□□□ -2
Trav9-4A0A0B4J1K2 Gm35835-202ENSMUST00000216984 3350 ntTSL 1 (best) BASIC2.54□□□□□ -2
Trav9-4A0A0B4J1K2 Gm37652-201ENSMUST00000195290 2095 ntBASIC2.54□□□□□ -2
Trav9-4A0A0B4J1K2 Olfr1402-202ENSMUST00000199297 4051 ntAPPRIS P1 TSL 5 BASIC2.54□□□□□ -2
Trav9-4A0A0B4J1K2 Gm30292-201ENSMUST00000194198 3000 ntTSL 3 BASIC2.54□□□□□ -2
Trav9-4A0A0B4J1K2 4930533N22Rik-201ENSMUST00000206433 3509 ntTSL 1 (best) BASIC2.54□□□□□ -2
Trav9-4A0A0B4J1K2 Gm6325-201ENSMUST00000122015 3114 ntBASIC2.53□□□□□ -2
Trav9-4A0A0B4J1K2 Olfr1500-204ENSMUST00000215760 2305 ntAPPRIS P1 TSL 5 BASIC2.53□□□□□ -2
Trav9-4A0A0B4J1K2 Fbxw16-201ENSMUST00000084984 1497 ntAPPRIS P1 TSL 1 (best) BASIC2.53□□□□□ -2
Trav9-4A0A0B4J1K2 Gm15902-202ENSMUST00000219623 3477 ntBASIC2.53□□□□□ -2
Trav9-4A0A0B4J1K2 Fbxw14-201ENSMUST00000112041 1332 ntAPPRIS ALT2 TSL 1 (best) BASIC2.53□□□□□ -2
Trav9-4A0A0B4J1K2 Gm8734-201ENSMUST00000211669 1312 ntBASIC2.53□□□□□ -2
Trav9-4A0A0B4J1K2 Gm24987-201ENSMUST00000104453 134 ntBASIC2.53□□□□□ -2
Trav9-4A0A0B4J1K2 Gm12025-201ENSMUST00000117768 144 ntBASIC2.53□□□□□ -2
Trav9-4A0A0B4J1K2 Gm14541-201ENSMUST00000118985 157 ntBASIC2.53□□□□□ -2
Trav9-4A0A0B4J1K2 Gm11896-201ENSMUST00000121105 820 ntBASIC2.53□□□□□ -2
Trav9-4A0A0B4J1K2 Mup-ps20-201ENSMUST00000121132 389 ntBASIC2.53□□□□□ -2
Trav9-4A0A0B4J1K2 Gm24936-201ENSMUST00000122598 247 ntBASIC2.53□□□□□ -2
Trav9-4A0A0B4J1K2 Gm16024-201ENSMUST00000128841 171 ntTSL 3 BASIC2.53□□□□□ -2
Trav9-4A0A0B4J1K2 Etaa1os-202ENSMUST00000148496 388 ntTSL 1 (best) BASIC2.53□□□□□ -2
Trav9-4A0A0B4J1K2 Snrpe-203ENSMUST00000166291 360 ntTSL 3 BASIC2.53□□□□□ -2
Trav9-4A0A0B4J1K2 Gm8906-202ENSMUST00000179375 465 ntAPPRIS ALT2 TSL 5 BASIC2.53□□□□□ -2
Trav9-4A0A0B4J1K2 Gm29064-201ENSMUST00000187014 813 ntBASIC2.53□□□□□ -2
Trav9-4A0A0B4J1K2 Gm28954-201ENSMUST00000190031 437 ntTSL 5 BASIC2.53□□□□□ -2
Trav9-4A0A0B4J1K2 Gm31942-202ENSMUST00000195375 437 ntTSL 5 BASIC2.53□□□□□ -2
Trav9-4A0A0B4J1K2 Mir1892-201ENSMUST00000197752 80 ntBASIC2.53□□□□□ -2
Trav9-4A0A0B4J1K2 Gm44839-201ENSMUST00000206590 241 ntTSL 5 BASIC2.53□□□□□ -2
Trav9-4A0A0B4J1K2 AC158686.2-201ENSMUST00000218599 976 ntTSL 1 (best) BASIC2.53□□□□□ -2
Trav9-4A0A0B4J1K2 Gm33424-201ENSMUST00000222317 257 ntTSL 5 BASIC2.53□□□□□ -2
Trav9-4A0A0B4J1K2 AC156559.1-201ENSMUST00000224158 222 ntBASIC2.53□□□□□ -2
Trav9-4A0A0B4J1K2 AC141884.1-201ENSMUST00000226327 636 ntBASIC2.53□□□□□ -2
Trav9-4A0A0B4J1K2 AC130547.1-201ENSMUST00000228079 1047 ntBASIC2.53□□□□□ -2
Trav9-4A0A0B4J1K2 Olfr945-201ENSMUST00000076903 963 ntAPPRIS P2 BASIC2.53□□□□□ -2
Trav9-4A0A0B4J1K2 Gm24147-201ENSMUST00000082763 144 ntBASIC2.53□□□□□ -2
Trav9-4A0A0B4J1K2 Gm10356-201ENSMUST00000097152 1258 ntBASIC2.53□□□□□ -2
Trav9-4A0A0B4J1K2 Gm43881-201ENSMUST00000203051 2530 ntBASIC2.53□□□□□ -2
Trav9-4A0A0B4J1K2 Olfr548-ps1-202ENSMUST00000210064 4287 ntAPPRIS P1 TSL 5 BASIC2.53□□□□□ -2
Trav9-4A0A0B4J1K2 Olfr818-203ENSMUST00000215527 1849 ntAPPRIS P1 TSL 5 BASIC2.53□□□□□ -2
Trav9-4A0A0B4J1K2 Gabra3-202ENSMUST00000114554 1790 ntAPPRIS ALT2 TSL 5 BASIC2.53□□□□□ -2
Trav9-4A0A0B4J1K2 Nlrp4d-201ENSMUST00000182420 2946 ntBASIC2.53□□□□□ -2
Trav9-4A0A0B4J1K2 Gm43320-201ENSMUST00000196047 2916 ntBASIC2.53□□□□□ -2
Trav9-4A0A0B4J1K2 Trdn-208ENSMUST00000219982 4149 ntAPPRIS ALT2 TSL 1 (best) BASIC2.53□□□□□ -2.01
Trav9-4A0A0B4J1K2 Olfr736-202ENSMUST00000213402 2402 ntAPPRIS P1 TSL 5 BASIC2.52□□□□□ -2.01
Trav9-4A0A0B4J1K2 Zfp273-203ENSMUST00000181391 2399 ntAPPRIS P1 TSL 1 (best) BASIC2.52□□□□□ -2.01
Trav9-4A0A0B4J1K2 Olfr1305-202ENSMUST00000213405 1815 ntAPPRIS P1 TSL 5 BASIC2.52□□□□□ -2.01
Trav9-4A0A0B4J1K2 Casp12-201ENSMUST00000027009 2649 ntAPPRIS P1 TSL 1 (best) BASIC2.52□□□□□ -2.01
Trav9-4A0A0B4J1K2 Gm14622-201ENSMUST00000117117 468 ntBASIC2.52□□□□□ -2.01
Trav9-4A0A0B4J1K2 Gm12788-201ENSMUST00000119090 308 ntBASIC2.52□□□□□ -2.01
Trav9-4A0A0B4J1K2 Gm12458-201ENSMUST00000119387 495 ntBASIC2.52□□□□□ -2.01
Trav9-4A0A0B4J1K2 Gm12757-201ENSMUST00000119465 800 ntBASIC2.52□□□□□ -2.01
Trav9-4A0A0B4J1K2 Gm15225-201ENSMUST00000120449 1017 ntBASIC2.52□□□□□ -2.01
Trav9-4A0A0B4J1K2 Gm11260-201ENSMUST00000121163 942 ntBASIC2.52□□□□□ -2.01
Trav9-4A0A0B4J1K2 Gm12858-201ENSMUST00000121913 208 ntBASIC2.52□□□□□ -2.01
Trav9-4A0A0B4J1K2 Zfp968-203ENSMUST00000131676 1272 ntAPPRIS P1 TSL 2 BASIC2.52□□□□□ -2.01
Trav9-4A0A0B4J1K2 Gm7855-201ENSMUST00000137737 687 ntBASIC2.52□□□□□ -2.01
Trav9-4A0A0B4J1K2 Gm2892-201ENSMUST00000145537 711 ntBASIC2.52□□□□□ -2.01
Trav9-4A0A0B4J1K2 Gm23229-201ENSMUST00000157297 105 ntBASIC2.52□□□□□ -2.01
Trav9-4A0A0B4J1K2 Gm23326-201ENSMUST00000157419 105 ntBASIC2.52□□□□□ -2.01
Trav9-4A0A0B4J1K2 Gm22380-201ENSMUST00000157479 95 ntBASIC2.52□□□□□ -2.01
Trav9-4A0A0B4J1K2 Gm24905-201ENSMUST00000158129 104 ntBASIC2.52□□□□□ -2.01
Trav9-4A0A0B4J1K2 Gm22158-201ENSMUST00000158411 126 ntBASIC2.52□□□□□ -2.01
Trav9-4A0A0B4J1K2 Gm25977-201ENSMUST00000158697 85 ntBASIC2.52□□□□□ -2.01
Trav9-4A0A0B4J1K2 Gm25835-201ENSMUST00000158917 144 ntBASIC2.52□□□□□ -2.01
Trav9-4A0A0B4J1K2 Ear-ps10-201ENSMUST00000161871 460 ntBASIC2.52□□□□□ -2.01
Trav9-4A0A0B4J1K2 Gm4207-201ENSMUST00000173144 960 ntBASIC2.52□□□□□ -2.01
Trav9-4A0A0B4J1K2 Gm20673-201ENSMUST00000177167 430 ntBASIC2.52□□□□□ -2.01
Trav9-4A0A0B4J1K2 H2al1k-201ENSMUST00000178196 510 ntAPPRIS P1 BASIC2.52□□□□□ -2.01
Trav9-4A0A0B4J1K2 Gm22367-201ENSMUST00000178930 132 ntBASIC2.52□□□□□ -2.01
Trav9-4A0A0B4J1K2 Gm26988-201ENSMUST00000183296 945 ntBASIC2.52□□□□□ -2.01
Trav9-4A0A0B4J1K2 Gm27535-201ENSMUST00000183814 157 ntBASIC2.52□□□□□ -2.01
Trav9-4A0A0B4J1K2 Gm37097-201ENSMUST00000193676 336 ntBASIC2.52□□□□□ -2.01
Trav9-4A0A0B4J1K2 Gm37587-202ENSMUST00000194935 475 ntTSL 3 BASIC2.52□□□□□ -2.01
Trav9-4A0A0B4J1K2 Fbxw15-203ENSMUST00000198397 927 ntAPPRIS ALT2 TSL 1 (best) BASIC2.52□□□□□ -2.01
Trav9-4A0A0B4J1K2 Olfr439-ps1-201ENSMUST00000204679 307 ntBASIC2.52□□□□□ -2.01
Trav9-4A0A0B4J1K2 1700065L07Rik-201ENSMUST00000204961 614 ntTSL 1 (best) BASIC2.52□□□□□ -2.01
Trav9-4A0A0B4J1K2 4930595O18Rik-201ENSMUST00000205099 607 ntBASIC2.52□□□□□ -2.01
Trav9-4A0A0B4J1K2 Gm44724-202ENSMUST00000208251 531 ntTSL 5 BASIC2.52□□□□□ -2.01
Trav9-4A0A0B4J1K2 Gm36243-201ENSMUST00000211546 610 ntTSL 3 BASIC2.52□□□□□ -2.01
Trav9-4A0A0B4J1K2 Gm30606-201ENSMUST00000212801 847 ntTSL 1 (best) BASIC2.52□□□□□ -2.01
Trav9-4A0A0B4J1K2 Olfr936-202ENSMUST00000216912 937 ntBASIC2.52□□□□□ -2.01
Trav9-4A0A0B4J1K2 AC122905.1-201ENSMUST00000218181 456 ntTSL 5 BASIC2.52□□□□□ -2.01
Trav9-4A0A0B4J1K2 AC131720.1-201ENSMUST00000218629 2132 ntBASIC2.52□□□□□ -2.01
Trav9-4A0A0B4J1K2 CT030030.1-201ENSMUST00000218809 152 ntBASIC2.52□□□□□ -2.01
Trav9-4A0A0B4J1K2 Gm9309-201ENSMUST00000223537 546 ntBASIC2.52□□□□□ -2.01
Trav9-4A0A0B4J1K2 AC158142.1-201ENSMUST00000226721 416 ntBASIC2.52□□□□□ -2.01
Trav9-4A0A0B4J1K2 Olfr1022-201ENSMUST00000054736 948 ntAPPRIS P1 BASIC2.52□□□□□ -2.01
Trav9-4A0A0B4J1K2 Olfr870-201ENSMUST00000086476 936 ntAPPRIS P1 BASIC2.52□□□□□ -2.01
Trav9-4A0A0B4J1K2 Gm10161-201ENSMUST00000091506 204 ntBASIC2.52□□□□□ -2.01
Trav9-4A0A0B4J1K2 Olfr1079-203ENSMUST00000216480 2071 ntAPPRIS ALT2 TSL 5 BASIC2.52□□□□□ -2.01
Trav9-4A0A0B4J1K2 Vmn1r71-207ENSMUST00000228248 5469 ntAPPRIS P2 BASIC2.52□□□□□ -2.01
Trav9-4A0A0B4J1K2 Gm31592-201ENSMUST00000217529 3471 ntTSL 1 (best) BASIC2.52□□□□□ -2.01
Trav9-4A0A0B4J1K2 Vmn1r46-203ENSMUST00000226715 10861 ntAPPRIS P1 BASIC2.52□□□□□ -2.01
Trav9-4A0A0B4J1K2 Vmn1r46-205ENSMUST00000228349 10861 ntAPPRIS P1 BASIC2.52□□□□□ -2.01
Trav9-4A0A0B4J1K2 Dst-211ENSMUST00000183034 23201 ntAPPRIS ALT2 TSL 5 BASIC2.52□□□□□ -2.01
Trav9-4A0A0B4J1K2 Gm42534-201ENSMUST00000196063 1754 ntBASIC2.51□□□□□ -2.01
Trav9-4A0A0B4J1K2 Lztfl1-201ENSMUST00000026274 4070 ntAPPRIS P1 TSL 1 (best) BASIC2.51□□□□□ -2.01
Trav9-4A0A0B4J1K2 Cfh-206ENSMUST00000192880 3746 ntTSL 5 BASIC2.51□□□□□ -2.01
Retrieved 100 of 76,532 protein–RNA pairs in 93.5 ms