Protein–RNA interactions for Protein: S4R1E0

H2afb1, Histone H2A, mousemouse

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H2afb1S4R1E0 Cbll1-204ENSMUST00000185739 3945 ntAPPRIS ALT1 TSL 1 (best) BASIC3.72□□□□□ -1.81
H2afb1S4R1E0 Vmn1r-ps73-201ENSMUST00000173130 2120 ntBASIC3.71□□□□□ -1.81
H2afb1S4R1E0 Gm5798-201ENSMUST00000164613 1751 ntAPPRIS P1 TSL 5 BASIC3.71□□□□□ -1.81
H2afb1S4R1E0 Olfr215-201ENSMUST00000061723 4112 ntAPPRIS P1 BASIC3.71□□□□□ -1.82
H2afb1S4R1E0 Gm37652-201ENSMUST00000195290 2095 ntBASIC3.71□□□□□ -1.82
H2afb1S4R1E0 Iglv2-201ENSMUST00000103752 348 ntAPPRIS ALT2 BASIC3.71□□□□□ -1.82
H2afb1S4R1E0 Gm26367-201ENSMUST00000104165 132 ntBASIC3.71□□□□□ -1.82
H2afb1S4R1E0 Gm24788-201ENSMUST00000104283 156 ntBASIC3.71□□□□□ -1.82
H2afb1S4R1E0 Gm15125-201ENSMUST00000116185 800 ntBASIC3.71□□□□□ -1.82
H2afb1S4R1E0 Gm12584-201ENSMUST00000117109 1105 ntBASIC3.71□□□□□ -1.82
H2afb1S4R1E0 Gm11874-201ENSMUST00000117437 130 ntBASIC3.71□□□□□ -1.82
H2afb1S4R1E0 Gm13607-201ENSMUST00000117875 539 ntBASIC3.71□□□□□ -1.82
H2afb1S4R1E0 Gm14750-201ENSMUST00000118262 516 ntBASIC3.71□□□□□ -1.82
H2afb1S4R1E0 Gm7485-201ENSMUST00000119502 1109 ntBASIC3.71□□□□□ -1.82
H2afb1S4R1E0 Gm12237-201ENSMUST00000120158 470 ntBASIC3.71□□□□□ -1.82
H2afb1S4R1E0 Gm14926-201ENSMUST00000120650 508 ntBASIC3.71□□□□□ -1.82
H2afb1S4R1E0 Rpl23a-ps4-201ENSMUST00000121008 455 ntBASIC3.71□□□□□ -1.82
H2afb1S4R1E0 Gm14916-201ENSMUST00000121904 204 ntBASIC3.71□□□□□ -1.82
H2afb1S4R1E0 Gm13471-201ENSMUST00000122057 433 ntBASIC3.71□□□□□ -1.82
H2afb1S4R1E0 Gm14408-202ENSMUST00000126726 279 ntAPPRIS P1 TSL 5 BASIC3.71□□□□□ -1.82
H2afb1S4R1E0 9530034E10Rik-201ENSMUST00000146982 502 ntTSL 1 (best) BASIC3.71□□□□□ -1.82
H2afb1S4R1E0 Gm13985-201ENSMUST00000154409 621 ntTSL 1 (best) BASIC3.71□□□□□ -1.82
H2afb1S4R1E0 D6Ertd474e-203ENSMUST00000160188 683 ntTSL 3 BASIC3.71□□□□□ -1.82
H2afb1S4R1E0 Gm15796-201ENSMUST00000162135 204 ntBASIC3.71□□□□□ -1.82
H2afb1S4R1E0 Gm20397-201ENSMUST00000174520 362 ntBASIC3.71□□□□□ -1.82
H2afb1S4R1E0 Olfr306-ps1-201ENSMUST00000174677 743 ntBASIC3.71□□□□□ -1.82
H2afb1S4R1E0 Aste1-207ENSMUST00000176940 1151 ntAPPRIS ALT2 TSL 5 BASIC3.71□□□□□ -1.82
H2afb1S4R1E0 S100a11-ps-201ENSMUST00000181735 306 ntBASIC3.71□□□□□ -1.82
H2afb1S4R1E0 Vmn1r181-201ENSMUST00000181796 1080 ntAPPRIS P1 BASIC3.71□□□□□ -1.82
H2afb1S4R1E0 Gm26713-201ENSMUST00000181827 627 ntTSL 1 (best) BASIC3.71□□□□□ -1.82
H2afb1S4R1E0 Gm8604-201ENSMUST00000183150 965 ntBASIC3.71□□□□□ -1.82
H2afb1S4R1E0 Gm27568-201ENSMUST00000184220 99 ntBASIC3.71□□□□□ -1.82
H2afb1S4R1E0 Gm28730-201ENSMUST00000185939 702 ntTSL 5 BASIC3.71□□□□□ -1.82
H2afb1S4R1E0 Gm5372-201ENSMUST00000187540 409 ntBASIC3.71□□□□□ -1.82
H2afb1S4R1E0 Gm28872-201ENSMUST00000191518 158 ntBASIC3.71□□□□□ -1.82
H2afb1S4R1E0 4930558C23Rik-201ENSMUST00000196239 731 ntAPPRIS P1 TSL 1 (best) BASIC3.71□□□□□ -1.82
H2afb1S4R1E0 Gm42451-201ENSMUST00000197410 244 ntBASIC3.71□□□□□ -1.82
H2afb1S4R1E0 Gm36382-201ENSMUST00000198892 541 ntBASIC3.71□□□□□ -1.82
H2afb1S4R1E0 9430099M06Rik-201ENSMUST00000210409 742 ntBASIC3.71□□□□□ -1.82
H2afb1S4R1E0 Gm45382-201ENSMUST00000210607 151 ntBASIC3.71□□□□□ -1.82
H2afb1S4R1E0 Gm45735-201ENSMUST00000212779 319 ntBASIC3.71□□□□□ -1.82
H2afb1S4R1E0 Gm40608-201ENSMUST00000213692 654 ntTSL 3 BASIC3.71□□□□□ -1.82
H2afb1S4R1E0 Gm40646-201ENSMUST00000218243 490 ntTSL 5 BASIC3.71□□□□□ -1.82
H2afb1S4R1E0 AC155830.1-201ENSMUST00000220050 3836 ntBASIC3.71□□□□□ -1.82
H2afb1S4R1E0 AC159622.3-201ENSMUST00000221010 361 ntTSL 1 (best) BASIC3.71□□□□□ -1.82
H2afb1S4R1E0 Gm45965-201ENSMUST00000221192 1284 ntBASIC3.71□□□□□ -1.82
H2afb1S4R1E0 Gstz1-204ENSMUST00000222222 724 ntAPPRIS ALT1 TSL 2 BASIC3.71□□□□□ -1.82
H2afb1S4R1E0 CT025689.2-201ENSMUST00000224979 429 ntBASIC3.71□□□□□ -1.82
H2afb1S4R1E0 AC154252.1-201ENSMUST00000226041 473 ntBASIC3.71□□□□□ -1.82
H2afb1S4R1E0 Olfr728-201ENSMUST00000051563 936 ntAPPRIS P1 BASIC3.71□□□□□ -1.82
H2afb1S4R1E0 Olfr251-201ENSMUST00000072731 951 ntAPPRIS P2 BASIC3.71□□□□□ -1.82
H2afb1S4R1E0 Vmn1r48-201ENSMUST00000073415 909 ntAPPRIS P1 BASIC3.71□□□□□ -1.82
H2afb1S4R1E0 n-R5s160-201ENSMUST00000083096 120 ntBASIC3.71□□□□□ -1.82
H2afb1S4R1E0 Mir325-201ENSMUST00000083491 98 ntBASIC3.71□□□□□ -1.82
H2afb1S4R1E0 n-R5s7-201ENSMUST00000083755 121 ntBASIC3.71□□□□□ -1.82
H2afb1S4R1E0 AC132237.1-201ENSMUST00000220950 4475 ntBASIC3.71□□□□□ -1.82
H2afb1S4R1E0 Olfr617-202ENSMUST00000215755 3000 ntAPPRIS P1 TSL 5 BASIC3.71□□□□□ -1.82
H2afb1S4R1E0 Olfr1322-202ENSMUST00000217355 3886 ntAPPRIS P1 TSL 5 BASIC3.71□□□□□ -1.82
H2afb1S4R1E0 Gm6982-201ENSMUST00000118752 1560 ntBASIC3.71□□□□□ -1.82
H2afb1S4R1E0 Olfr1033-204ENSMUST00000215682 3625 ntAPPRIS P1 TSL 1 (best) BASIC3.71□□□□□ -1.82
H2afb1S4R1E0 4921515E04Rik-203ENSMUST00000227364 2309 ntBASIC3.71□□□□□ -1.82
H2afb1S4R1E0 Gm8104-201ENSMUST00000168165 1761 ntAPPRIS P1 TSL 5 BASIC3.71□□□□□ -1.82
H2afb1S4R1E0 Gm13630-201ENSMUST00000127849 3650 ntTSL 1 (best) BASIC3.71□□□□□ -1.82
H2afb1S4R1E0 Adam26a-201ENSMUST00000049577 2489 ntAPPRIS P1 TSL 1 (best) BASIC3.7□□□□□ -1.82
H2afb1S4R1E0 Gm13340-201ENSMUST00000117219 1545 ntBASIC3.7□□□□□ -1.82
H2afb1S4R1E0 AC154184.1-201ENSMUST00000224375 1620 ntBASIC3.7□□□□□ -1.82
H2afb1S4R1E0 Cfap97-206ENSMUST00000164504 4521 ntAPPRIS P2 TSL 1 (best) BASIC3.7□□□□□ -1.82
H2afb1S4R1E0 AC153522.2-201ENSMUST00000218389 3853 ntBASIC3.7□□□□□ -1.82
H2afb1S4R1E0 Igkv14-100-201ENSMUST00000103325 350 ntAPPRIS ALT2 BASIC3.7□□□□□ -1.82
H2afb1S4R1E0 Gm24544-201ENSMUST00000103862 110 ntBASIC3.7□□□□□ -1.82
H2afb1S4R1E0 n-R5s52-201ENSMUST00000104614 113 ntBASIC3.7□□□□□ -1.82
H2afb1S4R1E0 Gm16400-201ENSMUST00000116523 1029 ntBASIC3.7□□□□□ -1.82
H2afb1S4R1E0 Gm8666-201ENSMUST00000117517 292 ntBASIC3.7□□□□□ -1.82
H2afb1S4R1E0 Gm15126-201ENSMUST00000118631 833 ntBASIC3.7□□□□□ -1.82
H2afb1S4R1E0 Gm12708-201ENSMUST00000126143 349 ntTSL 5 BASIC3.7□□□□□ -1.82
H2afb1S4R1E0 Tex50-201ENSMUST00000135643 1192 ntAPPRIS P1 TSL 2 BASIC3.7□□□□□ -1.82
H2afb1S4R1E0 Gm15735-201ENSMUST00000136187 514 ntTSL 3 BASIC3.7□□□□□ -1.82
H2afb1S4R1E0 Gm11680-201ENSMUST00000146550 439 ntTSL 5 BASIC3.7□□□□□ -1.82
H2afb1S4R1E0 A930041C12Rik-201ENSMUST00000149156 537 ntTSL 1 (best) BASIC3.7□□□□□ -1.82
H2afb1S4R1E0 Gm13632-201ENSMUST00000150119 384 ntTSL 5 BASIC3.7□□□□□ -1.82
H2afb1S4R1E0 Gm22135-201ENSMUST00000158752 108 ntBASIC3.7□□□□□ -1.82
H2afb1S4R1E0 Gm15974-201ENSMUST00000159103 531 ntBASIC3.7□□□□□ -1.82
H2afb1S4R1E0 Olfr758-ps1-201ENSMUST00000173901 841 ntBASIC3.7□□□□□ -1.82
H2afb1S4R1E0 Gm26460-201ENSMUST00000175061 126 ntBASIC3.7□□□□□ -1.82
H2afb1S4R1E0 Gm23215-201ENSMUST00000178153 121 ntBASIC3.7□□□□□ -1.82
H2afb1S4R1E0 Gm13698-201ENSMUST00000178325 732 ntTSL 5 BASIC3.7□□□□□ -1.82
H2afb1S4R1E0 Gm13694-202ENSMUST00000178655 732 ntTSL 5 BASIC3.7□□□□□ -1.82
H2afb1S4R1E0 Gm25944-201ENSMUST00000178758 94 ntBASIC3.7□□□□□ -1.82
H2afb1S4R1E0 Gm13696-201ENSMUST00000179311 732 ntTSL 5 BASIC3.7□□□□□ -1.82
H2afb1S4R1E0 Gm13693-202ENSMUST00000179448 732 ntTSL 5 BASIC3.7□□□□□ -1.82
H2afb1S4R1E0 Gm13695-202ENSMUST00000179504 732 ntTSL 5 BASIC3.7□□□□□ -1.82
H2afb1S4R1E0 Gm13697-202ENSMUST00000179552 732 ntTSL 5 BASIC3.7□□□□□ -1.82
H2afb1S4R1E0 Rian-214ENSMUST00000183026 596 ntTSL 5 BASIC3.7□□□□□ -1.82
H2afb1S4R1E0 Gm27016-201ENSMUST00000183294 715 ntTSL 5 BASIC3.7□□□□□ -1.82
H2afb1S4R1E0 Mir7006-201ENSMUST00000183624 69 ntBASIC3.7□□□□□ -1.82
H2afb1S4R1E0 Mrgprc4-ps-201ENSMUST00000186018 964 ntBASIC3.7□□□□□ -1.82
H2afb1S4R1E0 Gm29433-201ENSMUST00000191241 253 ntTSL 5 BASIC3.7□□□□□ -1.82
H2afb1S4R1E0 Gm38333-201ENSMUST00000193608 604 ntBASIC3.7□□□□□ -1.82
H2afb1S4R1E0 Gm37167-201ENSMUST00000194946 396 ntBASIC3.7□□□□□ -1.82
H2afb1S4R1E0 Gm37134-201ENSMUST00000195810 628 ntTSL 3 BASIC3.7□□□□□ -1.82
Retrieved 100 of 76,532 protein–RNA pairs in 77.5 ms