Protein–RNA interactions for Protein: Q9R1R2

Trim3, Tripartite motif-containing protein 3, mousemouse

Predictions only

Length 744 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim3Q9R1R2 Vmn1r-ps145-201ENSMUST00000175863 424 ntBASIC3.71□□□□□ -1.82
Trim3Q9R1R2 Nrg3os-201ENSMUST00000177141 927 ntTSL 1 (best) BASIC3.71□□□□□ -1.82
Trim3Q9R1R2 Gm14527-201ENSMUST00000179300 639 ntBASIC3.71□□□□□ -1.82
Trim3Q9R1R2 Gm15099-201ENSMUST00000179833 573 ntTSL 5 BASIC3.71□□□□□ -1.82
Trim3Q9R1R2 Gm21425-201ENSMUST00000180318 699 ntAPPRIS P1 BASIC3.71□□□□□ -1.82
Trim3Q9R1R2 1110015O18Rik-201ENSMUST00000183632 570 ntTSL 3 BASIC3.71□□□□□ -1.82
Trim3Q9R1R2 Gm28396-201ENSMUST00000190309 379 ntBASIC3.71□□□□□ -1.82
Trim3Q9R1R2 Gm37219-201ENSMUST00000192036 926 ntBASIC3.71□□□□□ -1.82
Trim3Q9R1R2 9530003O04Rik-201ENSMUST00000192663 908 ntBASIC3.71□□□□□ -1.82
Trim3Q9R1R2 Gm38088-201ENSMUST00000195829 241 ntBASIC3.71□□□□□ -1.82
Trim3Q9R1R2 Gm7468-201ENSMUST00000203900 652 ntBASIC3.71□□□□□ -1.82
Trim3Q9R1R2 Gm18540-201ENSMUST00000204025 526 ntBASIC3.71□□□□□ -1.82
Trim3Q9R1R2 Gm44092-201ENSMUST00000204470 258 ntBASIC3.71□□□□□ -1.82
Trim3Q9R1R2 Clec2f-202ENSMUST00000204981 657 ntTSL 1 (best) BASIC3.71□□□□□ -1.82
Trim3Q9R1R2 Klk1b18-ps-201ENSMUST00000205780 167 ntBASIC3.71□□□□□ -1.82
Trim3Q9R1R2 Olfr638-201ENSMUST00000209757 966 ntAPPRIS P2 BASIC3.71□□□□□ -1.82
Trim3Q9R1R2 2210414F02Rik-201ENSMUST00000215316 396 ntTSL 1 (best) BASIC3.71□□□□□ -1.82
Trim3Q9R1R2 Gm18016-201ENSMUST00000216119 801 ntBASIC3.71□□□□□ -1.82
Trim3Q9R1R2 Gm18242-201ENSMUST00000218455 542 ntBASIC3.71□□□□□ -1.82
Trim3Q9R1R2 AC163354.1-203ENSMUST00000222356 643 ntTSL 5 BASIC3.71□□□□□ -1.82
Trim3Q9R1R2 AL662807.1-201ENSMUST00000224183 126 ntBASIC3.71□□□□□ -1.82
Trim3Q9R1R2 Tsx-201ENSMUST00000033691 812 ntAPPRIS P1 TSL 1 (best) BASIC3.71□□□□□ -1.82
Trim3Q9R1R2 Tmed11-201ENSMUST00000004943 763 ntAPPRIS P1 TSL 1 (best) BASIC3.71□□□□□ -1.82
Trim3Q9R1R2 Olfr1022-201ENSMUST00000054736 948 ntAPPRIS P1 BASIC3.71□□□□□ -1.82
Trim3Q9R1R2 Gm5548-201ENSMUST00000055878 397 ntBASIC3.71□□□□□ -1.82
Trim3Q9R1R2 Olfr829-201ENSMUST00000058411 966 ntAPPRIS P2 BASIC3.71□□□□□ -1.82
Trim3Q9R1R2 Gm7204-201ENSMUST00000062591 600 ntBASIC3.71□□□□□ -1.82
Trim3Q9R1R2 Olfr873-202ENSMUST00000075717 991 ntAPPRIS ALT2 TSL 2 BASIC3.71□□□□□ -1.82
Trim3Q9R1R2 Olfr1450-201ENSMUST00000082006 978 ntAPPRIS P1 BASIC3.71□□□□□ -1.82
Trim3Q9R1R2 Gm23975-201ENSMUST00000082685 106 ntBASIC3.71□□□□□ -1.82
Trim3Q9R1R2 Gm26064-201ENSMUST00000083381 109 ntBASIC3.71□□□□□ -1.82
Trim3Q9R1R2 Gm23102-201ENSMUST00000083724 116 ntBASIC3.71□□□□□ -1.82
Trim3Q9R1R2 Gm26165-201ENSMUST00000083791 138 ntBASIC3.71□□□□□ -1.82
Trim3Q9R1R2 2410012E07Rik-201ENSMUST00000190896 1357 ntTSL 1 (best) BASIC3.71□□□□□ -1.82
Trim3Q9R1R2 Olfr769-203ENSMUST00000216906 4325 ntAPPRIS P1 TSL 5 BASIC3.71□□□□□ -1.82
Trim3Q9R1R2 Olfr437-202ENSMUST00000205175 2952 ntAPPRIS P1 TSL 5 BASIC3.71□□□□□ -1.82
Trim3Q9R1R2 Nlrp4d-201ENSMUST00000182420 2946 ntBASIC3.71□□□□□ -1.82
Trim3Q9R1R2 Gm45264-201ENSMUST00000210090 3995 ntBASIC3.7□□□□□ -1.82
Trim3Q9R1R2 Gm10745-201ENSMUST00000192022 1523 ntTSL 1 (best) BASIC3.7□□□□□ -1.82
Trim3Q9R1R2 Gm44678-201ENSMUST00000207828 2775 ntBASIC3.7□□□□□ -1.82
Trim3Q9R1R2 AI987944-204ENSMUST00000206801 1701 ntTSL 1 (best) BASIC3.7□□□□□ -1.82
Trim3Q9R1R2 Vmn1r14-205ENSMUST00000227884 7542 ntAPPRIS P2 BASIC3.7□□□□□ -1.82
Trim3Q9R1R2 Senp8-203ENSMUST00000177963 3792 ntAPPRIS P3 TSL 1 (best) BASIC3.7□□□□□ -1.82
Trim3Q9R1R2 Zfp518a-201ENSMUST00000050092 6840 ntAPPRIS P1 TSL 2 BASIC3.7□□□□□ -1.82
Trim3Q9R1R2 Gm37792-201ENSMUST00000195761 3413 ntBASIC3.7□□□□□ -1.82
Trim3Q9R1R2 Vmn2r32-201ENSMUST00000094866 3513 ntAPPRIS P1 TSL 5 BASIC3.7□□□□□ -1.82
Trim3Q9R1R2 2210414B05Rik-201ENSMUST00000139600 872 ntTSL 1 (best) BASIC3.7□□□□□ -1.82
Trim3Q9R1R2 Gm15279-201ENSMUST00000155593 288 ntBASIC3.7□□□□□ -1.82
Trim3Q9R1R2 Gm23228-201ENSMUST00000157296 270 ntBASIC3.7□□□□□ -1.82
Trim3Q9R1R2 Gm25185-201ENSMUST00000157754 96 ntBASIC3.7□□□□□ -1.82
Trim3Q9R1R2 Ptges3-ps-201ENSMUST00000160012 480 ntBASIC3.7□□□□□ -1.82
Trim3Q9R1R2 Gm27715-201ENSMUST00000184714 260 ntBASIC3.7□□□□□ -1.82
Trim3Q9R1R2 Gm29459-201ENSMUST00000191359 518 ntTSL 1 (best) BASIC3.7□□□□□ -1.82
Trim3Q9R1R2 Gm33973-201ENSMUST00000195148 534 ntBASIC3.7□□□□□ -1.82
Trim3Q9R1R2 Gm42451-201ENSMUST00000197410 244 ntBASIC3.7□□□□□ -1.82
Trim3Q9R1R2 Gm4644-201ENSMUST00000197587 400 ntBASIC3.7□□□□□ -1.82
Trim3Q9R1R2 Gm43967-201ENSMUST00000203787 301 ntBASIC3.7□□□□□ -1.82
Trim3Q9R1R2 Gm44088-201ENSMUST00000204595 237 ntBASIC3.7□□□□□ -1.82
Trim3Q9R1R2 Zfp950-210ENSMUST00000205854 466 ntTSL 3 BASIC3.7□□□□□ -1.82
Trim3Q9R1R2 AC132237.2-201ENSMUST00000221702 1209 ntBASIC3.7□□□□□ -1.82
Trim3Q9R1R2 AC132315.1-201ENSMUST00000221771 390 ntBASIC3.7□□□□□ -1.82
Trim3Q9R1R2 CT009754.1-201ENSMUST00000223489 558 ntTSL 3 BASIC3.7□□□□□ -1.82
Trim3Q9R1R2 AC133517.1-202ENSMUST00000224409 233 ntBASIC3.7□□□□□ -1.82
Trim3Q9R1R2 AC166095.1-203ENSMUST00000224591 233 ntBASIC3.7□□□□□ -1.82
Trim3Q9R1R2 AC154738.1-201ENSMUST00000227054 368 ntBASIC3.7□□□□□ -1.82
Trim3Q9R1R2 Olfr1260-201ENSMUST00000061830 933 ntAPPRIS P1 BASIC3.7□□□□□ -1.82
Trim3Q9R1R2 Gm25581-201ENSMUST00000083410 164 ntBASIC3.7□□□□□ -1.82
Trim3Q9R1R2 Mir34b-201ENSMUST00000083558 84 ntBASIC3.7□□□□□ -1.82
Trim3Q9R1R2 Gm5248-201ENSMUST00000186108 4046 ntBASIC3.7□□□□□ -1.82
Trim3Q9R1R2 Olfr801-204ENSMUST00000216067 4014 ntAPPRIS P1 TSL 5 BASIC3.7□□□□□ -1.82
Trim3Q9R1R2 Klra2-201ENSMUST00000032306 1799 ntAPPRIS P3 TSL 1 (best) BASIC3.7□□□□□ -1.82
Trim3Q9R1R2 Vmn1r89-203ENSMUST00000227176 4189 ntAPPRIS P2 BASIC3.7□□□□□ -1.82
Trim3Q9R1R2 Olfr642-202ENSMUST00000214299 4715 ntAPPRIS P1 TSL 5 BASIC3.7□□□□□ -1.82
Trim3Q9R1R2 Vmn2r82-201ENSMUST00000170596 3045 ntAPPRIS P1 TSL 5 BASIC3.7□□□□□ -1.82
Trim3Q9R1R2 4930544M13Rik-202ENSMUST00000181553 1403 ntTSL 1 (best) BASIC3.7□□□□□ -1.82
Trim3Q9R1R2 Olfr1309-203ENSMUST00000214935 5448 ntAPPRIS P1 TSL 5 BASIC3.69□□□□□ -1.82
Trim3Q9R1R2 AC123035.1-201ENSMUST00000213846 2671 ntTSL 5 BASIC3.69□□□□□ -1.82
Trim3Q9R1R2 Gm42481-201ENSMUST00000196822 2178 ntBASIC3.69□□□□□ -1.82
Trim3Q9R1R2 Gm18432-201ENSMUST00000195568 1451 ntBASIC3.69□□□□□ -1.82
Trim3Q9R1R2 Gm42736-201ENSMUST00000200723 1353 ntBASIC3.69□□□□□ -1.82
Trim3Q9R1R2 Olfr1137-202ENSMUST00000214209 3073 ntAPPRIS P1 TSL 5 BASIC3.69□□□□□ -1.82
Trim3Q9R1R2 Clec4a3-202ENSMUST00000117173 1165 ntAPPRIS P1 TSL 1 (best) BASIC3.69□□□□□ -1.82
Trim3Q9R1R2 Gm16383-201ENSMUST00000118122 232 ntBASIC3.69□□□□□ -1.82
Trim3Q9R1R2 Gm2288-201ENSMUST00000118560 638 ntBASIC3.69□□□□□ -1.82
Trim3Q9R1R2 Gm5943-201ENSMUST00000119458 459 ntBASIC3.69□□□□□ -1.82
Trim3Q9R1R2 Gm11746-201ENSMUST00000119843 821 ntBASIC3.69□□□□□ -1.82
Trim3Q9R1R2 Gm1866-201ENSMUST00000120701 477 ntBASIC3.69□□□□□ -1.82
Trim3Q9R1R2 Gm15367-201ENSMUST00000122398 1016 ntBASIC3.69□□□□□ -1.82
Trim3Q9R1R2 Gm16331-201ENSMUST00000144274 498 ntBASIC3.69□□□□□ -1.82
Trim3Q9R1R2 Gm23587-201ENSMUST00000157658 84 ntBASIC3.69□□□□□ -1.82
Trim3Q9R1R2 Gm17155-201ENSMUST00000165969 473 ntBASIC3.69□□□□□ -1.82
Trim3Q9R1R2 Vmn1r23-201ENSMUST00000175817 997 ntAPPRIS P1 BASIC3.69□□□□□ -1.82
Trim3Q9R1R2 Ear1-202ENSMUST00000179200 519 ntAPPRIS P1 TSL 1 (best) BASIC3.69□□□□□ -1.82
Trim3Q9R1R2 Gm29638-201ENSMUST00000186106 371 ntTSL 3 BASIC3.69□□□□□ -1.82
Trim3Q9R1R2 1700067G17Rik-201ENSMUST00000186180 603 ntTSL 1 (best) BASIC3.69□□□□□ -1.82
Trim3Q9R1R2 Gm6712-202ENSMUST00000186431 526 ntTSL 5 BASIC3.69□□□□□ -1.82
Trim3Q9R1R2 Vmn2r-ps149-201ENSMUST00000188423 590 ntBASIC3.69□□□□□ -1.82
Trim3Q9R1R2 Gm28997-201ENSMUST00000188759 429 ntBASIC3.69□□□□□ -1.82
Trim3Q9R1R2 1700027A15Rik-203ENSMUST00000188793 423 ntTSL 3 BASIC3.69□□□□□ -1.82
Trim3Q9R1R2 Gm43559-201ENSMUST00000198755 466 ntBASIC3.69□□□□□ -1.82
Retrieved 100 of 76,532 protein–RNA pairs in 92.3 ms