Protein–RNA interactions for Protein: Q9R060

Nubp1, Cytosolic Fe-S cluster assembly factor NUBP1, mousemouse

Predictions only

Length 320 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nubp1Q9R060 Gm26146-201ENSMUST00000104478 185 ntBASIC5.75□□□□□ -1.49
Nubp1Q9R060 Lrrc51-208ENSMUST00000106968 766 ntAPPRIS P1 TSL 2 BASIC5.75□□□□□ -1.49
Nubp1Q9R060 Gm23841-201ENSMUST00000116951 114 ntBASIC5.75□□□□□ -1.49
Nubp1Q9R060 Gm14880-201ENSMUST00000117581 292 ntBASIC5.75□□□□□ -1.49
Nubp1Q9R060 Gm6274-201ENSMUST00000118173 797 ntBASIC5.75□□□□□ -1.49
Nubp1Q9R060 Gm11504-201ENSMUST00000120211 173 ntBASIC5.75□□□□□ -1.49
Nubp1Q9R060 Gm7308-201ENSMUST00000121087 447 ntBASIC5.75□□□□□ -1.49
Nubp1Q9R060 Gm5699-201ENSMUST00000152491 723 ntBASIC5.75□□□□□ -1.49
Nubp1Q9R060 Gm22820-201ENSMUST00000157205 329 ntBASIC5.75□□□□□ -1.49
Nubp1Q9R060 Gm23539-201ENSMUST00000157537 224 ntBASIC5.75□□□□□ -1.49
Nubp1Q9R060 Gm26412-201ENSMUST00000157666 55 ntBASIC5.75□□□□□ -1.49
Nubp1Q9R060 Gm23995-201ENSMUST00000158060 129 ntBASIC5.75□□□□□ -1.49
Nubp1Q9R060 Gm22328-201ENSMUST00000158074 112 ntBASIC5.75□□□□□ -1.49
Nubp1Q9R060 Gm27510-201ENSMUST00000158214 64 ntBASIC5.75□□□□□ -1.49
Nubp1Q9R060 Gm22529-201ENSMUST00000158817 123 ntBASIC5.75□□□□□ -1.49
Nubp1Q9R060 Ulbp1-201ENSMUST00000169796 1093 ntAPPRIS ALT2 TSL 1 (best) BASIC5.75□□□□□ -1.49
Nubp1Q9R060 Gm20534-201ENSMUST00000172957 172 ntBASIC5.75□□□□□ -1.49
Nubp1Q9R060 Gm27540-201ENSMUST00000184950 187 ntBASIC5.75□□□□□ -1.49
Nubp1Q9R060 Gm10421-202ENSMUST00000186114 132 ntTSL 3 BASIC5.75□□□□□ -1.49
Nubp1Q9R060 Gm5372-201ENSMUST00000187540 409 ntBASIC5.75□□□□□ -1.49
Nubp1Q9R060 Gm20257-202ENSMUST00000188643 130 ntBASIC5.75□□□□□ -1.49
Nubp1Q9R060 Gm28978-201ENSMUST00000191120 615 ntBASIC5.75□□□□□ -1.49
Nubp1Q9R060 Sprr2h-202ENSMUST00000191886 297 ntTSL 1 (best) BASIC5.75□□□□□ -1.49
Nubp1Q9R060 Gm43392-201ENSMUST00000196560 434 ntBASIC5.75□□□□□ -1.49
Nubp1Q9R060 Gm43212-201ENSMUST00000198208 394 ntBASIC5.75□□□□□ -1.49
Nubp1Q9R060 n-TStga1-201ENSMUST00000199903 109 ntBASIC5.75□□□□□ -1.49
Nubp1Q9R060 Gm42453-201ENSMUST00000200477 409 ntBASIC5.75□□□□□ -1.49
Nubp1Q9R060 Gm44473-201ENSMUST00000204039 152 ntBASIC5.75□□□□□ -1.49
Nubp1Q9R060 Gm44371-201ENSMUST00000204148 467 ntBASIC5.75□□□□□ -1.49
Nubp1Q9R060 Gm44111-201ENSMUST00000204649 399 ntBASIC5.75□□□□□ -1.49
Nubp1Q9R060 Gm30262-201ENSMUST00000219137 791 ntTSL 5 BASIC5.75□□□□□ -1.49
Nubp1Q9R060 CT485612.4-201ENSMUST00000223405 250 ntBASIC5.75□□□□□ -1.49
Nubp1Q9R060 Gm5899-201ENSMUST00000071770 270 ntBASIC5.75□□□□□ -1.49
Nubp1Q9R060 Gm10205-201ENSMUST00000087431 234 ntBASIC5.75□□□□□ -1.49
Nubp1Q9R060 Defa25-201ENSMUST00000095425 279 ntAPPRIS P1 TSL 1 (best) BASIC5.75□□□□□ -1.49
Nubp1Q9R060 Scn9a-203ENSMUST00000112354 6471 ntAPPRIS ALT2 TSL 5 BASIC5.75□□□□□ -1.49
Nubp1Q9R060 Slc26a3-201ENSMUST00000001254 2908 ntAPPRIS P1 TSL 1 (best) BASIC5.75□□□□□ -1.49
Nubp1Q9R060 Cylc1-201ENSMUST00000101282 1923 ntAPPRIS P2 TSL 1 (best) BASIC5.75□□□□□ -1.49
Nubp1Q9R060 A330023F24Rik-202ENSMUST00000181273 4217 ntTSL 1 (best) BASIC5.75□□□□□ -1.49
Nubp1Q9R060 Gm36041-201ENSMUST00000218971 2245 ntTSL 5 BASIC5.75□□□□□ -1.49
Nubp1Q9R060 Sprr2a3-202ENSMUST00000193337 2880 ntAPPRIS P1 TSL 1 (best) BASIC5.75□□□□□ -1.49
Nubp1Q9R060 Gm7361-201ENSMUST00000074148 2995 ntAPPRIS P1 TSL 1 (best) BASIC5.75□□□□□ -1.49
Nubp1Q9R060 Peli1-202ENSMUST00000101477 3703 ntAPPRIS P1 TSL 1 (best) BASIC5.75□□□□□ -1.49
Nubp1Q9R060 Kif9-203ENSMUST00000197248 3184 ntTSL 1 (best) BASIC5.75□□□□□ -1.49
Nubp1Q9R060 C87977-204ENSMUST00000105757 1885 ntAPPRIS P2 TSL 1 (best) BASIC5.75□□□□□ -1.49
Nubp1Q9R060 4933406B17Rik-201ENSMUST00000212602 4333 ntTSL 5 BASIC5.75□□□□□ -1.49
Nubp1Q9R060 Aox1-201ENSMUST00000001027 4423 ntAPPRIS P1 TSL 1 (best) BASIC5.75□□□□□ -1.49
Nubp1Q9R060 Trp63-208ENSMUST00000115310 5366 ntAPPRIS ALT1 TSL 1 (best) BASIC5.75□□□□□ -1.49
Nubp1Q9R060 Uba1y-201ENSMUST00000115894 3981 ntAPPRIS P1 TSL 5 BASIC5.74□□□□□ -1.49
Nubp1Q9R060 Psg25-201ENSMUST00000094795 3109 ntAPPRIS P1 TSL 1 (best) BASIC5.74□□□□□ -1.49
Nubp1Q9R060 Olfr1278-203ENSMUST00000213727 6744 ntAPPRIS P1 TSL 5 BASIC5.74□□□□□ -1.49
Nubp1Q9R060 Rps15a-207ENSMUST00000172457 5130 ntAPPRIS P1 TSL 1 (best) BASIC5.74□□□□□ -1.49
Nubp1Q9R060 Gm44660-201ENSMUST00000207134 2465 ntBASIC5.74□□□□□ -1.49
Nubp1Q9R060 Ugt2b1-201ENSMUST00000031183 2573 ntAPPRIS P1 TSL 1 (best) BASIC5.74□□□□□ -1.49
Nubp1Q9R060 Spata31d1d-201ENSMUST00000052978 3827 ntAPPRIS P1 TSL 2 BASIC5.74□□□□□ -1.49
Nubp1Q9R060 Gm14910-201ENSMUST00000121037 1805 ntBASIC5.74□□□□□ -1.49
Nubp1Q9R060 Map7d2-201ENSMUST00000043151 3087 ntAPPRIS ALT2 TSL 1 (best) BASIC5.74□□□□□ -1.49
Nubp1Q9R060 Gm38299-201ENSMUST00000193214 3789 ntBASIC5.74□□□□□ -1.49
Nubp1Q9R060 Dsg1b-201ENSMUST00000076737 3965 ntAPPRIS P1 TSL 1 (best) BASIC5.74□□□□□ -1.49
Nubp1Q9R060 Zim1-201ENSMUST00000002336 7693 ntAPPRIS P1 TSL 1 (best) BASIC5.74□□□□□ -1.49
Nubp1Q9R060 Mir687-201ENSMUST00000102166 89 ntBASIC5.74□□□□□ -1.49
Nubp1Q9R060 Gm25346-201ENSMUST00000104509 128 ntBASIC5.74□□□□□ -1.49
Nubp1Q9R060 Gm12640-201ENSMUST00000120097 310 ntBASIC5.74□□□□□ -1.49
Nubp1Q9R060 Gm13531-201ENSMUST00000121893 543 ntBASIC5.74□□□□□ -1.49
Nubp1Q9R060 Vmn1r-ps83-201ENSMUST00000172677 705 ntBASIC5.74□□□□□ -1.49
Nubp1Q9R060 D630011A20Rik-201ENSMUST00000180858 500 ntTSL 1 (best) BASIC5.74□□□□□ -1.49
Nubp1Q9R060 Gm28353-201ENSMUST00000186482 570 ntBASIC5.74□□□□□ -1.49
Nubp1Q9R060 Gm28533-201ENSMUST00000186741 570 ntBASIC5.74□□□□□ -1.49
Nubp1Q9R060 Gm37430-201ENSMUST00000193039 196 ntBASIC5.74□□□□□ -1.49
Nubp1Q9R060 Gm37689-201ENSMUST00000193139 275 ntBASIC5.74□□□□□ -1.49
Nubp1Q9R060 Gm43725-201ENSMUST00000200122 369 ntBASIC5.74□□□□□ -1.49
Nubp1Q9R060 Gm29926-201ENSMUST00000201443 660 ntTSL 3 BASIC5.74□□□□□ -1.49
Nubp1Q9R060 Gm44881-201ENSMUST00000205425 367 ntBASIC5.74□□□□□ -1.49
Nubp1Q9R060 Gm45315-201ENSMUST00000209283 333 ntBASIC5.74□□□□□ -1.49
Nubp1Q9R060 Gm45646-201ENSMUST00000210983 441 ntTSL 5 BASIC5.74□□□□□ -1.49
Nubp1Q9R060 Gm35552-201ENSMUST00000214355 396 ntTSL 5 BASIC5.74□□□□□ -1.49
Nubp1Q9R060 CT954323.1-201ENSMUST00000222774 229 ntBASIC5.74□□□□□ -1.49
Nubp1Q9R060 AC138765.3-201ENSMUST00000227981 423 ntBASIC5.74□□□□□ -1.49
Nubp1Q9R060 Defb40-201ENSMUST00000066258 389 ntAPPRIS P1 TSL 1 (best) BASIC5.74□□□□□ -1.49
Nubp1Q9R060 C030005K15Rik-201ENSMUST00000166373 1882 ntAPPRIS P1 BASIC5.74□□□□□ -1.49
Nubp1Q9R060 Hapln1-201ENSMUST00000022108 5715 ntAPPRIS P1 TSL 1 (best) BASIC5.74□□□□□ -1.49
Nubp1Q9R060 Gm43871-201ENSMUST00000204931 1955 ntBASIC5.74□□□□□ -1.49
Nubp1Q9R060 Olfr919-202ENSMUST00000215612 1992 ntAPPRIS ALT2 TSL 5 BASIC5.74□□□□□ -1.49
Nubp1Q9R060 Vmn2r98-201ENSMUST00000170424 2574 ntAPPRIS P1 TSL 5 BASIC5.74□□□□□ -1.49
Nubp1Q9R060 Nlrp1c-ps-201ENSMUST00000171546 3457 ntTSL 1 (best) BASIC5.74□□□□□ -1.49
Nubp1Q9R060 Gm43166-201ENSMUST00000202871 4379 ntTSL 5 BASIC5.74□□□□□ -1.49
Nubp1Q9R060 Olfr1246-204ENSMUST00000217254 5411 ntAPPRIS P1 TSL 5 BASIC5.74□□□□□ -1.49
Nubp1Q9R060 A2m-201ENSMUST00000032203 4605 ntAPPRIS P1 TSL 1 (best) BASIC5.74□□□□□ -1.49
Nubp1Q9R060 Fam205a4-201ENSMUST00000108026 4130 ntAPPRIS P1 TSL 5 BASIC5.74□□□□□ -1.49
Nubp1Q9R060 Cyld-204ENSMUST00000209206 4032 ntTSL 5 BASIC5.74□□□□□ -1.49
Nubp1Q9R060 Nfatc3-202ENSMUST00000211991 3712 ntAPPRIS ALT2 TSL 1 (best) BASIC5.74□□□□□ -1.49
Nubp1Q9R060 Nlgn1-203ENSMUST00000191835 3013 ntAPPRIS ALT2 TSL 1 (best) BASIC5.74□□□□□ -1.49
Nubp1Q9R060 Nsa2-201ENSMUST00000073456 2700 ntAPPRIS P1 TSL 1 (best) BASIC5.74□□□□□ -1.49
Nubp1Q9R060 Arhgap5-202ENSMUST00000217820 2332 ntTSL 5 BASIC5.74□□□□□ -1.49
Nubp1Q9R060 Zfp568-202ENSMUST00000146074 6867 ntAPPRIS ALT2 TSL 1 (best) BASIC5.74□□□□□ -1.49
Nubp1Q9R060 Gm12763-201ENSMUST00000151344 1939 ntTSL 1 (best) BASIC5.74□□□□□ -1.49
Nubp1Q9R060 Gm18310-201ENSMUST00000206494 3912 ntBASIC5.73□□□□□ -1.49
Nubp1Q9R060 Zfp473-203ENSMUST00000120074 3624 ntAPPRIS P3 TSL 1 (best) BASIC5.73□□□□□ -1.49
Nubp1Q9R060 Slc6a14-201ENSMUST00000033414 3434 ntAPPRIS P1 TSL 1 (best) BASIC5.73□□□□□ -1.49
Nubp1Q9R060 Zfp867-201ENSMUST00000057799 3412 ntAPPRIS P1 TSL 1 (best) BASIC5.73□□□□□ -1.49
Retrieved 100 of 76,532 protein–RNA pairs in 82.4 ms