Protein–RNA interactions for Protein: Q9ES34

Ube3b, Ubiquitin-protein ligase E3B, mousemouse

Predictions only

Length 1,070 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ube3bQ9ES34 9430037G07Rik-201ENSMUST00000180723 3177 ntTSL 1 (best) BASIC6.59□□□□□ -1.36
Ube3bQ9ES34 Vmn1r34-202ENSMUST00000226262 2952 ntAPPRIS P1 BASIC6.58□□□□□ -1.36
Ube3bQ9ES34 Gm37079-201ENSMUST00000194114 2135 ntBASIC6.58□□□□□ -1.36
Ube3bQ9ES34 Gm37769-201ENSMUST00000193753 2369 ntBASIC6.58□□□□□ -1.36
Ube3bQ9ES34 Prrc2c-201ENSMUST00000028016 8815 ntAPPRIS ALT2 TSL 5 BASIC6.58□□□□□ -1.36
Ube3bQ9ES34 Serpinb5-201ENSMUST00000086701 2572 ntAPPRIS P1 TSL 1 (best) BASIC6.58□□□□□ -1.36
Ube3bQ9ES34 Ctps2-203ENSMUST00000112300 741 ntTSL 3 BASIC6.58□□□□□ -1.36
Ube3bQ9ES34 Hikeshi-203ENSMUST00000117354 297 ntTSL 2 BASIC6.58□□□□□ -1.36
Ube3bQ9ES34 Gm8595-201ENSMUST00000118250 630 ntBASIC6.58□□□□□ -1.36
Ube3bQ9ES34 Trav20-201ENSMUST00000142754 347 ntBASIC6.58□□□□□ -1.36
Ube3bQ9ES34 Tmem216-206ENSMUST00000154383 927 ntAPPRIS P1 TSL 3 BASIC6.58□□□□□ -1.36
Ube3bQ9ES34 Gm25906-201ENSMUST00000158489 126 ntBASIC6.58□□□□□ -1.36
Ube3bQ9ES34 Gm25348-201ENSMUST00000158961 111 ntBASIC6.58□□□□□ -1.36
Ube3bQ9ES34 Gm17020-201ENSMUST00000172274 274 ntBASIC6.58□□□□□ -1.36
Ube3bQ9ES34 Vmn1r-ps68-201ENSMUST00000174638 399 ntBASIC6.58□□□□□ -1.36
Ube3bQ9ES34 Aste1-207ENSMUST00000176940 1151 ntAPPRIS ALT2 TSL 5 BASIC6.58□□□□□ -1.36
Ube3bQ9ES34 Gm28873-201ENSMUST00000186130 667 ntTSL 2 BASIC6.58□□□□□ -1.36
Ube3bQ9ES34 Gm37817-201ENSMUST00000195276 434 ntBASIC6.58□□□□□ -1.36
Ube3bQ9ES34 Igkv13-64-201ENSMUST00000198143 343 ntBASIC6.58□□□□□ -1.36
Ube3bQ9ES34 Gm18100-201ENSMUST00000200897 452 ntBASIC6.58□□□□□ -1.36
Ube3bQ9ES34 Gm19131-201ENSMUST00000203408 789 ntBASIC6.58□□□□□ -1.36
Ube3bQ9ES34 Olfr278-ps1-201ENSMUST00000205676 238 ntBASIC6.58□□□□□ -1.36
Ube3bQ9ES34 AC151968.1-201ENSMUST00000214437 568 ntTSL 5 BASIC6.58□□□□□ -1.36
Ube3bQ9ES34 CT010455.1-201ENSMUST00000218579 413 ntBASIC6.58□□□□□ -1.36
Ube3bQ9ES34 Gm7034-201ENSMUST00000218638 645 ntBASIC6.58□□□□□ -1.36
Ube3bQ9ES34 Gm4012-201ENSMUST00000221504 581 ntBASIC6.58□□□□□ -1.36
Ube3bQ9ES34 AC126275.2-201ENSMUST00000225224 253 ntBASIC6.58□□□□□ -1.36
Ube3bQ9ES34 AC117656.3-202ENSMUST00000225842 1055 ntBASIC6.58□□□□□ -1.36
Ube3bQ9ES34 Olfr1458-201ENSMUST00000076729 906 ntAPPRIS ALT2 BASIC6.58□□□□□ -1.36
Ube3bQ9ES34 Defa17-201ENSMUST00000079528 397 ntAPPRIS P1 TSL 1 (best) BASIC6.58□□□□□ -1.36
Ube3bQ9ES34 Gm26228-201ENSMUST00000082512 107 ntBASIC6.58□□□□□ -1.36
Ube3bQ9ES34 Gm25080-201ENSMUST00000082526 107 ntBASIC6.58□□□□□ -1.36
Ube3bQ9ES34 Gm22828-201ENSMUST00000083768 107 ntBASIC6.58□□□□□ -1.36
Ube3bQ9ES34 Gm25518-201ENSMUST00000083864 107 ntBASIC6.58□□□□□ -1.36
Ube3bQ9ES34 Olfr1249-201ENSMUST00000099769 957 ntAPPRIS P1 BASIC6.58□□□□□ -1.36
Ube3bQ9ES34 Olfr1002-201ENSMUST00000099920 957 ntAPPRIS P1 BASIC6.58□□□□□ -1.36
Ube3bQ9ES34 2610044O15Rik8-205ENSMUST00000190157 1776 ntTSL 1 (best) BASIC6.58□□□□□ -1.36
Ube3bQ9ES34 Pramel4-201ENSMUST00000084191 2292 ntAPPRIS ALT2 TSL 1 (best) BASIC6.58□□□□□ -1.36
Ube3bQ9ES34 Cts8-201ENSMUST00000021891 2505 ntAPPRIS P1 TSL 1 (best) BASIC6.58□□□□□ -1.36
Ube3bQ9ES34 Gm11290-204ENSMUST00000224688 3042 ntBASIC6.58□□□□□ -1.36
Ube3bQ9ES34 Pum2-210ENSMUST00000169089 3295 ntAPPRIS ALT2 TSL 5 BASIC6.58□□□□□ -1.36
Ube3bQ9ES34 Elf1-204ENSMUST00000227192 3765 ntAPPRIS ALT2 BASIC6.58□□□□□ -1.36
Ube3bQ9ES34 Vmn1r201-202ENSMUST00000226330 4770 ntAPPRIS P1 BASIC6.58□□□□□ -1.36
Ube3bQ9ES34 Vmn1r6-202ENSMUST00000226689 8453 ntAPPRIS P2 BASIC6.58□□□□□ -1.36
Ube3bQ9ES34 Gm43359-201ENSMUST00000197944 2200 ntBASIC6.58□□□□□ -1.36
Ube3bQ9ES34 Olfr919-202ENSMUST00000215612 1992 ntAPPRIS ALT2 TSL 5 BASIC6.58□□□□□ -1.36
Ube3bQ9ES34 Gm37051-201ENSMUST00000194535 2943 ntBASIC6.58□□□□□ -1.36
Ube3bQ9ES34 Sdr16c6-202ENSMUST00000108383 1923 ntAPPRIS P1 TSL 1 (best) BASIC6.58□□□□□ -1.36
Ube3bQ9ES34 Ireb2-201ENSMUST00000034843 5770 ntAPPRIS P1 TSL 1 (best) BASIC6.58□□□□□ -1.36
Ube3bQ9ES34 AC125532.1-201ENSMUST00000216210 2334 ntBASIC6.58□□□□□ -1.36
Ube3bQ9ES34 Ccdc146-202ENSMUST00000115245 3389 ntAPPRIS P2 TSL 5 BASIC6.57□□□□□ -1.36
Ube3bQ9ES34 Gm37738-201ENSMUST00000192396 4716 ntBASIC6.57□□□□□ -1.36
Ube3bQ9ES34 Chrna6-201ENSMUST00000033882 2906 ntAPPRIS P1 TSL 1 (best) BASIC6.57□□□□□ -1.36
Ube3bQ9ES34 1500004A13Rik-203ENSMUST00000183966 3743 ntTSL 1 (best) BASIC6.57□□□□□ -1.36
Ube3bQ9ES34 Vmn2r-ps38-201ENSMUST00000173752 2573 ntBASIC6.57□□□□□ -1.36
Ube3bQ9ES34 Ctsm-202ENSMUST00000223778 1905 ntAPPRIS P1 BASIC6.57□□□□□ -1.36
Ube3bQ9ES34 Gm13250-201ENSMUST00000117209 753 ntBASIC6.57□□□□□ -1.36
Ube3bQ9ES34 Tpt1-ps3-201ENSMUST00000121046 519 ntBASIC6.57□□□□□ -1.36
Ube3bQ9ES34 Gm14618-201ENSMUST00000149377 740 ntTSL 1 (best) BASIC6.57□□□□□ -1.36
Ube3bQ9ES34 Gm23806-201ENSMUST00000175157 109 ntBASIC6.57□□□□□ -1.36
Ube3bQ9ES34 Gm23523-201ENSMUST00000180190 107 ntBASIC6.57□□□□□ -1.36
Ube3bQ9ES34 Gm27636-201ENSMUST00000184528 122 ntBASIC6.57□□□□□ -1.36
Ube3bQ9ES34 Gm27747-201ENSMUST00000184707 85 ntBASIC6.57□□□□□ -1.36
Ube3bQ9ES34 Mir7687-201ENSMUST00000184722 59 ntBASIC6.57□□□□□ -1.36
Ube3bQ9ES34 Gm21842-202ENSMUST00000185311 174 ntTSL 1 (best) BASIC6.57□□□□□ -1.36
Ube3bQ9ES34 Gm29285-201ENSMUST00000185500 174 ntTSL 1 (best) BASIC6.57□□□□□ -1.36
Ube3bQ9ES34 Gm21801-202ENSMUST00000185537 174 ntTSL 1 (best) BASIC6.57□□□□□ -1.36
Ube3bQ9ES34 Gm28312-201ENSMUST00000185976 174 ntTSL 1 (best) BASIC6.57□□□□□ -1.36
Ube3bQ9ES34 Gm2914-201ENSMUST00000186120 328 ntBASIC6.57□□□□□ -1.36
Ube3bQ9ES34 Gm29213-201ENSMUST00000186199 174 ntTSL 1 (best) BASIC6.57□□□□□ -1.36
Ube3bQ9ES34 Gm21428-201ENSMUST00000186550 174 ntTSL 1 (best) BASIC6.57□□□□□ -1.36
Ube3bQ9ES34 Gm29370-201ENSMUST00000186581 174 ntTSL 1 (best) BASIC6.57□□□□□ -1.36
Ube3bQ9ES34 Gm21633-202ENSMUST00000186630 174 ntTSL 1 (best) BASIC6.57□□□□□ -1.36
Ube3bQ9ES34 Gm28890-201ENSMUST00000186686 173 ntTSL 1 (best) BASIC6.57□□□□□ -1.36
Ube3bQ9ES34 Gm28092-201ENSMUST00000186709 174 ntTSL 1 (best) BASIC6.57□□□□□ -1.36
Ube3bQ9ES34 Gm21572-202ENSMUST00000186850 174 ntTSL 1 (best) BASIC6.57□□□□□ -1.36
Ube3bQ9ES34 Gm21916-202ENSMUST00000187044 174 ntTSL 1 (best) BASIC6.57□□□□□ -1.36
Ube3bQ9ES34 Gm29839-201ENSMUST00000187045 174 ntTSL 1 (best) BASIC6.57□□□□□ -1.36
Ube3bQ9ES34 Gm28442-201ENSMUST00000187052 174 ntTSL 1 (best) BASIC6.57□□□□□ -1.36
Ube3bQ9ES34 Gm21780-202ENSMUST00000187110 174 ntTSL 1 (best) BASIC6.57□□□□□ -1.36
Ube3bQ9ES34 Gm29656-201ENSMUST00000187236 174 ntTSL 1 (best) BASIC6.57□□□□□ -1.36
Ube3bQ9ES34 Gm21821-202ENSMUST00000187288 175 ntTSL 1 (best) BASIC6.57□□□□□ -1.36
Ube3bQ9ES34 Gm28886-201ENSMUST00000187350 174 ntTSL 1 (best) BASIC6.57□□□□□ -1.36
Ube3bQ9ES34 Gm21599-202ENSMUST00000187381 174 ntTSL 1 (best) BASIC6.57□□□□□ -1.36
Ube3bQ9ES34 Gm28128-201ENSMUST00000187403 174 ntTSL 1 (best) BASIC6.57□□□□□ -1.36
Ube3bQ9ES34 Gm21450-201ENSMUST00000187408 174 ntTSL 1 (best) BASIC6.57□□□□□ -1.36
Ube3bQ9ES34 Gm28689-201ENSMUST00000187441 174 ntTSL 1 (best) BASIC6.57□□□□□ -1.36
Ube3bQ9ES34 Gm28851-201ENSMUST00000187800 174 ntTSL 1 (best) BASIC6.57□□□□□ -1.36
Ube3bQ9ES34 Gm28554-201ENSMUST00000187964 174 ntTSL 1 (best) BASIC6.57□□□□□ -1.36
Ube3bQ9ES34 Gm28984-201ENSMUST00000188202 174 ntTSL 1 (best) BASIC6.57□□□□□ -1.36
Ube3bQ9ES34 Gm21529-202ENSMUST00000188473 174 ntTSL 1 (best) BASIC6.57□□□□□ -1.36
Ube3bQ9ES34 Gm28604-202ENSMUST00000188638 174 ntTSL 1 (best) BASIC6.57□□□□□ -1.36
Ube3bQ9ES34 Gm21588-202ENSMUST00000188721 174 ntTSL 1 (best) BASIC6.57□□□□□ -1.36
Ube3bQ9ES34 Gm21539-202ENSMUST00000188764 174 ntTSL 1 (best) BASIC6.57□□□□□ -1.36
Ube3bQ9ES34 Gm28216-201ENSMUST00000188785 174 ntTSL 1 (best) BASIC6.57□□□□□ -1.36
Ube3bQ9ES34 Gm29645-201ENSMUST00000189117 174 ntTSL 1 (best) BASIC6.57□□□□□ -1.36
Ube3bQ9ES34 Gm29345-201ENSMUST00000189213 399 ntTSL 3 BASIC6.57□□□□□ -1.36
Ube3bQ9ES34 Gm21413-201ENSMUST00000189224 174 ntTSL 1 (best) BASIC6.57□□□□□ -1.36
Ube3bQ9ES34 Gm21723-202ENSMUST00000189444 174 ntTSL 1 (best) BASIC6.57□□□□□ -1.36
Ube3bQ9ES34 Gm36782-201ENSMUST00000189459 174 ntTSL 1 (best) BASIC6.57□□□□□ -1.36
Retrieved 100 of 76,532 protein–RNA pairs in 91.8 ms