Protein–RNA interactions for Protein: Q9ERG0

Lima1, LIM domain and actin-binding protein 1, mousemouse

Known RBP Predictions only

Length 753 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lima1Q9ERG0 B3galt2-201ENSMUST00000038252 9288 ntAPPRIS P1 TSL 1 (best) BASIC3.51□□□□□ -1.85
Lima1Q9ERG0 Tex47-203ENSMUST00000160634 2881 ntAPPRIS P1 TSL 1 (best) BASIC3.51□□□□□ -1.85
Lima1Q9ERG0 Csnka2ip-202ENSMUST00000209382 2859 ntAPPRIS ALT2 TSL 5 BASIC3.51□□□□□ -1.85
Lima1Q9ERG0 Gm15095-201ENSMUST00000118996 1430 ntBASIC3.51□□□□□ -1.85
Lima1Q9ERG0 Vmn1r185-207ENSMUST00000227695 5292 ntAPPRIS P1 BASIC3.51□□□□□ -1.85
Lima1Q9ERG0 Gm9911-201ENSMUST00000211467 2802 ntBASIC3.51□□□□□ -1.85
Lima1Q9ERG0 Cyp3a13-201ENSMUST00000031741 2956 ntAPPRIS P1 TSL 1 (best) BASIC3.51□□□□□ -1.85
Lima1Q9ERG0 Vmn2r108-201ENSMUST00000167314 2568 ntAPPRIS P1 TSL 5 BASIC3.51□□□□□ -1.85
Lima1Q9ERG0 Vmn1r89-204ENSMUST00000227239 1992 ntAPPRIS P2 BASIC3.51□□□□□ -1.85
Lima1Q9ERG0 Olfr784-202ENSMUST00000214064 3119 ntAPPRIS P1 TSL 5 BASIC3.5□□□□□ -1.85
Lima1Q9ERG0 Nlrp9a-204ENSMUST00000122040 2850 ntAPPRIS ALT2 TSL 1 (best) BASIC3.5□□□□□ -1.85
Lima1Q9ERG0 C87414-206ENSMUST00000162964 2852 ntAPPRIS P2 TSL 1 (best) BASIC3.5□□□□□ -1.85
Lima1Q9ERG0 Zfp280c-204ENSMUST00000114940 3863 ntAPPRIS ALT2 TSL 1 (best) BASIC3.5□□□□□ -1.85
Lima1Q9ERG0 Olfr596-201ENSMUST00000104880 939 ntAPPRIS P1 BASIC3.5□□□□□ -1.85
Lima1Q9ERG0 Gm6760-201ENSMUST00000114682 604 ntAPPRIS P1 TSL 1 (best) BASIC3.5□□□□□ -1.85
Lima1Q9ERG0 Gm15613-201ENSMUST00000118396 326 ntBASIC3.5□□□□□ -1.85
Lima1Q9ERG0 Psmb7-ps2-201ENSMUST00000118546 820 ntBASIC3.5□□□□□ -1.85
Lima1Q9ERG0 Gm14902-201ENSMUST00000145576 1007 ntTSL 1 (best) BASIC3.5□□□□□ -1.85
Lima1Q9ERG0 Gm12971-201ENSMUST00000154720 511 ntTSL 5 BASIC3.5□□□□□ -1.85
Lima1Q9ERG0 Gm11917-201ENSMUST00000154813 373 ntTSL 2 BASIC3.5□□□□□ -1.85
Lima1Q9ERG0 Gm24244-201ENSMUST00000157317 130 ntBASIC3.5□□□□□ -1.85
Lima1Q9ERG0 Vmn1r-ps151-201ENSMUST00000176956 982 ntBASIC3.5□□□□□ -1.85
Lima1Q9ERG0 Gm2056-201ENSMUST00000178852 435 ntAPPRIS P1 BASIC3.5□□□□□ -1.85
Lima1Q9ERG0 Pnrc2-203ENSMUST00000180300 171 ntTSL 1 (best) BASIC3.5□□□□□ -1.85
Lima1Q9ERG0 Gm26746-201ENSMUST00000181722 487 ntBASIC3.5□□□□□ -1.85
Lima1Q9ERG0 Gm26933-201ENSMUST00000182320 827 ntBASIC3.5□□□□□ -1.85
Lima1Q9ERG0 Gm10292-201ENSMUST00000183142 581 ntBASIC3.5□□□□□ -1.85
Lima1Q9ERG0 1700029B22Rik-202ENSMUST00000186532 694 ntTSL 1 (best) BASIC3.5□□□□□ -1.85
Lima1Q9ERG0 Gm28654-201ENSMUST00000189801 379 ntBASIC3.5□□□□□ -1.85
Lima1Q9ERG0 Gm19774-201ENSMUST00000190667 114 ntBASIC3.5□□□□□ -1.85
Lima1Q9ERG0 Gm15927-204ENSMUST00000206075 372 ntTSL 3 BASIC3.5□□□□□ -1.85
Lima1Q9ERG0 Gm5339-201ENSMUST00000210551 1102 ntBASIC3.5□□□□□ -1.85
Lima1Q9ERG0 Gm45796-201ENSMUST00000212483 114 ntBASIC3.5□□□□□ -1.85
Lima1Q9ERG0 Olfr1244-ps1-201ENSMUST00000213226 683 ntBASIC3.5□□□□□ -1.85
Lima1Q9ERG0 2210414F02Rik-201ENSMUST00000215316 396 ntTSL 1 (best) BASIC3.5□□□□□ -1.85
Lima1Q9ERG0 Gm34005-201ENSMUST00000215834 282 ntBASIC3.5□□□□□ -1.85
Lima1Q9ERG0 Gm39348-202ENSMUST00000217239 375 ntTSL 2 BASIC3.5□□□□□ -1.85
Lima1Q9ERG0 AC132384.5-201ENSMUST00000218562 226 ntBASIC3.5□□□□□ -1.85
Lima1Q9ERG0 AC132833.3-201ENSMUST00000227472 866 ntBASIC3.5□□□□□ -1.85
Lima1Q9ERG0 Olfr998-201ENSMUST00000052307 1012 ntAPPRIS P1 BASIC3.5□□□□□ -1.85
Lima1Q9ERG0 Sprr1b-201ENSMUST00000062160 830 ntAPPRIS P1 TSL 1 (best) BASIC3.5□□□□□ -1.85
Lima1Q9ERG0 Gm10042-201ENSMUST00000079884 78 ntBASIC3.5□□□□□ -1.85
Lima1Q9ERG0 Gm22304-201ENSMUST00000082688 129 ntBASIC3.5□□□□□ -1.85
Lima1Q9ERG0 C130023A14Rik-201ENSMUST00000193537 3087 ntBASIC3.5□□□□□ -1.85
Lima1Q9ERG0 Olfr1369-ps1-204ENSMUST00000215207 3794 ntAPPRIS P1 TSL 5 BASIC3.5□□□□□ -1.85
Lima1Q9ERG0 Gm2093-201ENSMUST00000180518 3526 ntTSL 1 (best) BASIC3.5□□□□□ -1.85
Lima1Q9ERG0 AC155830.1-201ENSMUST00000220050 3836 ntBASIC3.5□□□□□ -1.85
Lima1Q9ERG0 Ghr-208ENSMUST00000161561 2749 ntAPPRIS P1 TSL 1 (best) BASIC3.5□□□□□ -1.85
Lima1Q9ERG0 Olfr1448-204ENSMUST00000216888 4064 ntAPPRIS P1 TSL 5 BASIC3.49□□□□□ -1.85
Lima1Q9ERG0 Gm42768-201ENSMUST00000197734 2897 ntBASIC3.49□□□□□ -1.85
Lima1Q9ERG0 Olfr679-202ENSMUST00000214328 5184 ntAPPRIS P1 TSL 5 BASIC3.49□□□□□ -1.85
Lima1Q9ERG0 Zfp942-201ENSMUST00000074295 1461 ntAPPRIS P1 TSL 5 BASIC3.49□□□□□ -1.85
Lima1Q9ERG0 Ssxb8-201ENSMUST00000101690 518 ntAPPRIS P1 TSL 5 BASIC3.49□□□□□ -1.85
Lima1Q9ERG0 Gm22758-201ENSMUST00000102275 96 ntBASIC3.49□□□□□ -1.85
Lima1Q9ERG0 Gm7485-201ENSMUST00000119502 1109 ntBASIC3.49□□□□□ -1.85
Lima1Q9ERG0 Cyp4b1-ps2-201ENSMUST00000119563 333 ntBASIC3.49□□□□□ -1.85
Lima1Q9ERG0 Olfr1118-201ENSMUST00000121296 996 ntAPPRIS P2 BASIC3.49□□□□□ -1.85
Lima1Q9ERG0 Gm6374-201ENSMUST00000159051 788 ntBASIC3.49□□□□□ -1.85
Lima1Q9ERG0 Gm20526-201ENSMUST00000173416 158 ntBASIC3.49□□□□□ -1.85
Lima1Q9ERG0 Vmn1r-ps28-201ENSMUST00000174767 942 ntBASIC3.49□□□□□ -1.85
Lima1Q9ERG0 Obox4-ps8-201ENSMUST00000175831 714 ntBASIC3.49□□□□□ -1.85
Lima1Q9ERG0 Gm27834-201ENSMUST00000183427 125 ntBASIC3.49□□□□□ -1.85
Lima1Q9ERG0 Mir7676-1-201ENSMUST00000183491 62 ntBASIC3.49□□□□□ -1.85
Lima1Q9ERG0 Mir7676-2-201ENSMUST00000183523 62 ntBASIC3.49□□□□□ -1.85
Lima1Q9ERG0 Gm27189-201ENSMUST00000184119 190 ntBASIC3.49□□□□□ -1.85
Lima1Q9ERG0 Gm29191-201ENSMUST00000185427 621 ntTSL 1 (best) BASIC3.49□□□□□ -1.85
Lima1Q9ERG0 Gm28486-201ENSMUST00000188443 621 ntTSL 1 (best) BASIC3.49□□□□□ -1.85
Lima1Q9ERG0 1700023F02Rik-203ENSMUST00000189619 473 ntTSL 3 BASIC3.49□□□□□ -1.85
Lima1Q9ERG0 9430037O13Rik-201ENSMUST00000192556 1008 ntBASIC3.49□□□□□ -1.85
Lima1Q9ERG0 Ighv1-17-1-201ENSMUST00000194849 351 ntBASIC3.49□□□□□ -1.85
Lima1Q9ERG0 Mir129b-201ENSMUST00000197461 65 ntBASIC3.49□□□□□ -1.85
Lima1Q9ERG0 Gm43814-201ENSMUST00000197851 413 ntBASIC3.49□□□□□ -1.85
Lima1Q9ERG0 Gm43975-201ENSMUST00000203023 481 ntBASIC3.49□□□□□ -1.85
Lima1Q9ERG0 Klra14-ps-202ENSMUST00000203601 1104 ntTSL 5 BASIC3.49□□□□□ -1.85
Lima1Q9ERG0 A730082K24Rik-201ENSMUST00000205365 465 ntTSL 3 BASIC3.49□□□□□ -1.85
Lima1Q9ERG0 4930402F11Rik-201ENSMUST00000207348 1000 ntTSL 1 (best) BASIC3.49□□□□□ -1.85
Lima1Q9ERG0 Gm45689-201ENSMUST00000210522 133 ntBASIC3.49□□□□□ -1.85
Lima1Q9ERG0 Gm16419-201ENSMUST00000221057 625 ntBASIC3.49□□□□□ -1.85
Lima1Q9ERG0 AC154467.1-201ENSMUST00000227527 449 ntBASIC3.49□□□□□ -1.85
Lima1Q9ERG0 Gm10282-201ENSMUST00000075602 1151 ntAPPRIS P1 BASIC3.49□□□□□ -1.85
Lima1Q9ERG0 Gm22864-201ENSMUST00000083950 130 ntBASIC3.49□□□□□ -1.85
Lima1Q9ERG0 Vmn1r81-201ENSMUST00000086232 921 ntAPPRIS P2 BASIC3.49□□□□□ -1.85
Lima1Q9ERG0 Spata22-202ENSMUST00000092926 1274 ntAPPRIS P1 TSL 1 (best) BASIC3.49□□□□□ -1.85
Lima1Q9ERG0 Olfr1471-201ENSMUST00000096203 945 ntAPPRIS P1 BASIC3.49□□□□□ -1.85
Lima1Q9ERG0 Olfr1195-201ENSMUST00000099818 927 ntAPPRIS P1 BASIC3.49□□□□□ -1.85
Lima1Q9ERG0 Vmn1r51-207ENSMUST00000227766 4218 ntAPPRIS P1 BASIC3.49□□□□□ -1.85
Lima1Q9ERG0 Ankrd28-207ENSMUST00000227863 6616 ntAPPRIS ALT1 BASIC3.49□□□□□ -1.85
Lima1Q9ERG0 Ifi203-ps-201ENSMUST00000155076 2556 ntBASIC3.49□□□□□ -1.85
Lima1Q9ERG0 A630033H20Rik-205ENSMUST00000167673 3044 ntAPPRIS P1 TSL 2 BASIC3.49□□□□□ -1.85
Lima1Q9ERG0 Gm8011-201ENSMUST00000172163 1751 ntAPPRIS P1 TSL 5 BASIC3.48□□□□□ -1.85
Lima1Q9ERG0 Olfr1242-202ENSMUST00000111540 2189 ntAPPRIS P1 TSL 3 BASIC3.48□□□□□ -1.85
Lima1Q9ERG0 Bsph2-201ENSMUST00000108526 532 ntAPPRIS P1 TSL 1 (best) BASIC3.48□□□□□ -1.85
Lima1Q9ERG0 Gm13228-201ENSMUST00000118937 634 ntBASIC3.48□□□□□ -1.85
Lima1Q9ERG0 Gm15263-201ENSMUST00000121556 642 ntBASIC3.48□□□□□ -1.85
Lima1Q9ERG0 Gm15323-201ENSMUST00000156109 429 ntTSL 3 BASIC3.48□□□□□ -1.85
Lima1Q9ERG0 Snora81-201ENSMUST00000157310 178 ntBASIC3.48□□□□□ -1.85
Lima1Q9ERG0 Gm26362-201ENSMUST00000158865 315 ntBASIC3.48□□□□□ -1.85
Lima1Q9ERG0 Gm16490-201ENSMUST00000165299 351 ntBASIC3.48□□□□□ -1.85
Lima1Q9ERG0 Mir6933-201ENSMUST00000184982 81 ntBASIC3.48□□□□□ -1.85
Lima1Q9ERG0 Mir6914-201ENSMUST00000184999 69 ntBASIC3.48□□□□□ -1.85
Retrieved 100 of 76,532 protein–RNA pairs in 129.6 ms