Protein–RNA interactions for Protein: Q9EPU0

Upf1, Regulator of nonsense transcripts 1, mousemouse

Known RBP Predictions only

Length 1,124 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Upf1Q9EPU0 Gm38329-201ENSMUST00000193473 427 ntBASIC5.76□□□□□ -1.49
Upf1Q9EPU0 Gm31925-201ENSMUST00000193561 600 ntTSL 1 (best) BASIC5.76□□□□□ -1.49
Upf1Q9EPU0 Smr2-203ENSMUST00000196477 676 ntAPPRIS ALT2 TSL 1 (best) BASIC5.76□□□□□ -1.49
Upf1Q9EPU0 Mir129b-201ENSMUST00000197461 65 ntBASIC5.76□□□□□ -1.49
Upf1Q9EPU0 Gm5034-201ENSMUST00000199115 634 ntBASIC5.76□□□□□ -1.49
Upf1Q9EPU0 Med7-201ENSMUST00000020665 1193 ntAPPRIS P1 TSL 1 (best) BASIC5.76□□□□□ -1.49
Upf1Q9EPU0 AC158807.1-201ENSMUST00000217959 187 ntBASIC5.76□□□□□ -1.49
Upf1Q9EPU0 AC157494.1-201ENSMUST00000221127 549 ntTSL 5 BASIC5.76□□□□□ -1.49
Upf1Q9EPU0 AC155634.2-201ENSMUST00000222001 489 ntTSL 3 BASIC5.76□□□□□ -1.49
Upf1Q9EPU0 AC153662.1-201ENSMUST00000222220 270 ntBASIC5.76□□□□□ -1.49
Upf1Q9EPU0 AC125484.1-201ENSMUST00000223218 234 ntBASIC5.76□□□□□ -1.49
Upf1Q9EPU0 AC173481.1-201ENSMUST00000223351 270 ntBASIC5.76□□□□□ -1.49
Upf1Q9EPU0 AC192333.2-201ENSMUST00000224771 196 ntBASIC5.76□□□□□ -1.49
Upf1Q9EPU0 AC174459.2-201ENSMUST00000226036 160 ntBASIC5.76□□□□□ -1.49
Upf1Q9EPU0 Rpl31-ps13-201ENSMUST00000060994 378 ntBASIC5.76□□□□□ -1.49
Upf1Q9EPU0 Mucl1-201ENSMUST00000078842 621 ntAPPRIS ALT2 BASIC5.76□□□□□ -1.49
Upf1Q9EPU0 Snord38a-201ENSMUST00000083746 71 ntBASIC5.76□□□□□ -1.49
Upf1Q9EPU0 Smr2-201ENSMUST00000087043 676 ntAPPRIS P3 TSL 1 (best) BASIC5.76□□□□□ -1.49
Upf1Q9EPU0 AW112010-201ENSMUST00000099676 770 ntTSL 1 (best) BASIC5.76□□□□□ -1.49
Upf1Q9EPU0 Rnf24-201ENSMUST00000059372 5978 ntAPPRIS P1 TSL 1 (best) BASIC5.76□□□□□ -1.49
Upf1Q9EPU0 Gm7905-201ENSMUST00000119933 1386 ntBASIC5.76□□□□□ -1.49
Upf1Q9EPU0 Gm6207-201ENSMUST00000120075 1386 ntBASIC5.76□□□□□ -1.49
Upf1Q9EPU0 Gm6228-201ENSMUST00000178856 1386 ntBASIC5.76□□□□□ -1.49
Upf1Q9EPU0 Gm6221-201ENSMUST00000180064 1386 ntBASIC5.76□□□□□ -1.49
Upf1Q9EPU0 Chrna6-201ENSMUST00000033882 2906 ntAPPRIS P1 TSL 1 (best) BASIC5.76□□□□□ -1.49
Upf1Q9EPU0 Gm38362-201ENSMUST00000192999 2064 ntBASIC5.76□□□□□ -1.49
Upf1Q9EPU0 E330013P04Rik-201ENSMUST00000065383 2070 ntTSL 1 (best) BASIC5.76□□□□□ -1.49
Upf1Q9EPU0 Capn6-201ENSMUST00000087316 3561 ntAPPRIS P1 TSL 1 (best) BASIC5.76□□□□□ -1.49
Upf1Q9EPU0 Pcdh15-222ENSMUST00000147189 6806 ntAPPRIS ALT2 TSL 1 (best) BASIC5.76□□□□□ -1.49
Upf1Q9EPU0 Car5b-201ENSMUST00000033739 3436 ntAPPRIS P1 TSL 1 (best) BASIC5.76□□□□□ -1.49
Upf1Q9EPU0 9330159M07Rik-201ENSMUST00000180712 2702 ntTSL 1 (best) BASIC5.76□□□□□ -1.49
Upf1Q9EPU0 Olfr273-202ENSMUST00000107670 4796 ntAPPRIS P1 TSL 5 BASIC5.75□□□□□ -1.49
Upf1Q9EPU0 Gm38128-201ENSMUST00000192085 3250 ntBASIC5.75□□□□□ -1.49
Upf1Q9EPU0 Gm38257-201ENSMUST00000195881 2761 ntBASIC5.75□□□□□ -1.49
Upf1Q9EPU0 Vmn1r66-203ENSMUST00000227719 2765 ntAPPRIS P1 BASIC5.75□□□□□ -1.49
Upf1Q9EPU0 Atp13a5-203ENSMUST00000143373 3789 ntAPPRIS ALT2 TSL 1 (best) BASIC5.75□□□□□ -1.49
Upf1Q9EPU0 Obox3-202ENSMUST00000095217 1603 ntAPPRIS P1 TSL 1 (best) BASIC5.75□□□□□ -1.49
Upf1Q9EPU0 Gm43920-201ENSMUST00000204953 2159 ntTSL 1 (best) BASIC5.75□□□□□ -1.49
Upf1Q9EPU0 Wwp1-201ENSMUST00000035982 4832 ntAPPRIS P1 TSL 5 BASIC5.75□□□□□ -1.49
Upf1Q9EPU0 Gm14197-201ENSMUST00000117480 1049 ntBASIC5.75□□□□□ -1.49
Upf1Q9EPU0 Gm14837-201ENSMUST00000119688 206 ntBASIC5.75□□□□□ -1.49
Upf1Q9EPU0 Fyttd1-202ENSMUST00000120345 648 ntTSL 5 BASIC5.75□□□□□ -1.49
Upf1Q9EPU0 Clec2f-201ENSMUST00000121051 374 ntBASIC5.75□□□□□ -1.49
Upf1Q9EPU0 Gm14366-201ENSMUST00000121970 730 ntBASIC5.75□□□□□ -1.49
Upf1Q9EPU0 Gm25706-201ENSMUST00000157828 247 ntBASIC5.75□□□□□ -1.49
Upf1Q9EPU0 Gm23583-201ENSMUST00000158533 289 ntBASIC5.75□□□□□ -1.49
Upf1Q9EPU0 Gm24553-201ENSMUST00000158653 131 ntBASIC5.75□□□□□ -1.49
Upf1Q9EPU0 Defa27-202ENSMUST00000168340 371 ntTSL 5 BASIC5.75□□□□□ -1.49
Upf1Q9EPU0 Gm25194-201ENSMUST00000177987 79 ntBASIC5.75□□□□□ -1.49
Upf1Q9EPU0 Gm27308-201ENSMUST00000184807 233 ntBASIC5.75□□□□□ -1.49
Upf1Q9EPU0 Gm28740-201ENSMUST00000186142 215 ntBASIC5.75□□□□□ -1.49
Upf1Q9EPU0 A930005H10Rik-205ENSMUST00000187055 436 ntTSL 3 BASIC5.75□□□□□ -1.49
Upf1Q9EPU0 Gm5058-201ENSMUST00000187331 463 ntBASIC5.75□□□□□ -1.49
Upf1Q9EPU0 A430093F15Rik-206ENSMUST00000189565 651 ntTSL 3 BASIC5.75□□□□□ -1.49
Upf1Q9EPU0 Gm10421-203ENSMUST00000190266 781 ntTSL 1 (best) BASIC5.75□□□□□ -1.49
Upf1Q9EPU0 Olfr717-ps1-201ENSMUST00000205589 556 ntBASIC5.75□□□□□ -1.49
Upf1Q9EPU0 AC139376.1-201ENSMUST00000220056 1250 ntBASIC5.75□□□□□ -1.49
Upf1Q9EPU0 AC122924.2-201ENSMUST00000220799 298 ntBASIC5.75□□□□□ -1.49
Upf1Q9EPU0 Olfr1450-201ENSMUST00000082006 978 ntAPPRIS P1 BASIC5.75□□□□□ -1.49
Upf1Q9EPU0 Gm24031-201ENSMUST00000083930 131 ntBASIC5.75□□□□□ -1.49
Upf1Q9EPU0 Rfx3-202ENSMUST00000165566 9146 ntAPPRIS P1 TSL 5 BASIC5.75□□□□□ -1.49
Upf1Q9EPU0 Gm44587-201ENSMUST00000207399 1685 ntBASIC5.75□□□□□ -1.49
Upf1Q9EPU0 9430037G07Rik-201ENSMUST00000180723 3177 ntTSL 1 (best) BASIC5.75□□□□□ -1.49
Upf1Q9EPU0 Ceacam2-201ENSMUST00000044547 2844 ntAPPRIS P1 TSL 5 BASIC5.75□□□□□ -1.49
Upf1Q9EPU0 Nlrp5-201ENSMUST00000015866 3508 ntAPPRIS P4 TSL 1 (best) BASIC5.74□□□□□ -1.49
Upf1Q9EPU0 Gm37248-201ENSMUST00000193576 3174 ntBASIC5.74□□□□□ -1.49
Upf1Q9EPU0 Mtm1-213ENSMUST00000171933 3488 ntAPPRIS P1 TSL 1 (best) BASIC5.74□□□□□ -1.49
Upf1Q9EPU0 Gm44193-201ENSMUST00000204822 2523 ntBASIC5.74□□□□□ -1.49
Upf1Q9EPU0 Olfr270-203ENSMUST00000215010 2502 ntAPPRIS ALT1 TSL 5 BASIC5.74□□□□□ -1.49
Upf1Q9EPU0 Pcdh9-207ENSMUST00000195376 5096 ntTSL 5 BASIC5.74□□□□□ -1.49
Upf1Q9EPU0 Mir551b-201ENSMUST00000102165 98 ntBASIC5.74□□□□□ -1.49
Upf1Q9EPU0 Gm13785-201ENSMUST00000119099 690 ntBASIC5.74□□□□□ -1.49
Upf1Q9EPU0 Gm14392-201ENSMUST00000120332 401 ntBASIC5.74□□□□□ -1.49
Upf1Q9EPU0 Gm24251-201ENSMUST00000157324 114 ntBASIC5.74□□□□□ -1.49
Upf1Q9EPU0 Gm25923-201ENSMUST00000158312 138 ntBASIC5.74□□□□□ -1.49
Upf1Q9EPU0 Gm23028-201ENSMUST00000158773 265 ntBASIC5.74□□□□□ -1.49
Upf1Q9EPU0 Gm17153-201ENSMUST00000171314 490 ntBASIC5.74□□□□□ -1.49
Upf1Q9EPU0 Gm9613-201ENSMUST00000171662 196 ntBASIC5.74□□□□□ -1.49
Upf1Q9EPU0 Mir5134-201ENSMUST00000175529 78 ntBASIC5.74□□□□□ -1.49
Upf1Q9EPU0 Gm25670-201ENSMUST00000178423 107 ntBASIC5.74□□□□□ -1.49
Upf1Q9EPU0 Gm26239-201ENSMUST00000178842 107 ntBASIC5.74□□□□□ -1.49
Upf1Q9EPU0 Gm24267-201ENSMUST00000179841 107 ntBASIC5.74□□□□□ -1.49
Upf1Q9EPU0 Gm21991-201ENSMUST00000180006 508 ntBASIC5.74□□□□□ -1.49
Upf1Q9EPU0 Sbp-205ENSMUST00000183017 700 ntTSL 5 BASIC5.74□□□□□ -1.49
Upf1Q9EPU0 Tmem167-ps3-201ENSMUST00000186718 178 ntBASIC5.74□□□□□ -1.49
Upf1Q9EPU0 Gm29556-201ENSMUST00000187591 696 ntBASIC5.74□□□□□ -1.49
Upf1Q9EPU0 Il3-201ENSMUST00000019058 629 ntAPPRIS P1 TSL 1 (best) BASIC5.74□□□□□ -1.49
Upf1Q9EPU0 Ighv1-28-201ENSMUST00000192987 351 ntBASIC5.74□□□□□ -1.49
Upf1Q9EPU0 Gm43525-201ENSMUST00000196460 616 ntTSL 2 BASIC5.74□□□□□ -1.49
Upf1Q9EPU0 Hcfc1r1-ps2-201ENSMUST00000199379 339 ntBASIC5.74□□□□□ -1.49
Upf1Q9EPU0 Gm43151-201ENSMUST00000201093 657 ntTSL 3 BASIC5.74□□□□□ -1.49
Upf1Q9EPU0 Gm44648-201ENSMUST00000208267 329 ntBASIC5.74□□□□□ -1.49
Upf1Q9EPU0 Gm2516-201ENSMUST00000210011 954 ntTSL 1 (best) BASIC5.74□□□□□ -1.49
Upf1Q9EPU0 E330011O21Rik-203ENSMUST00000210555 455 ntTSL 5 BASIC5.74□□□□□ -1.49
Upf1Q9EPU0 Olfr936-202ENSMUST00000216912 937 ntBASIC5.74□□□□□ -1.49
Upf1Q9EPU0 Gm30034-201ENSMUST00000219589 248 ntTSL 5 BASIC5.74□□□□□ -1.49
Upf1Q9EPU0 AC141425.1-201ENSMUST00000224989 265 ntBASIC5.74□□□□□ -1.49
Upf1Q9EPU0 AC102291.2-201ENSMUST00000228083 367 ntBASIC5.74□□□□□ -1.49
Upf1Q9EPU0 Gm24292-201ENSMUST00000082888 107 ntBASIC5.74□□□□□ -1.49
Upf1Q9EPU0 Gm25126-201ENSMUST00000083343 102 ntBASIC5.74□□□□□ -1.49
Retrieved 100 of 76,532 protein–RNA pairs in 105.8 ms