Protein–RNA interactions for Protein: Q9DC48

Cdc40, Pre-mRNA-processing factor 17, mousemouse

Known RBP Predictions only

Length 579 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdc40Q9DC48 Gm19885-201ENSMUST00000212853 343 ntBASIC3.54□□□□□ -1.84
Cdc40Q9DC48 Gm32283-201ENSMUST00000218861 549 ntTSL 5 BASIC3.54□□□□□ -1.84
Cdc40Q9DC48 AC154441.1-201ENSMUST00000223653 1006 ntBASIC3.54□□□□□ -1.84
Cdc40Q9DC48 AL662807.1-201ENSMUST00000224183 126 ntBASIC3.54□□□□□ -1.84
Cdc40Q9DC48 AC187103.4-202ENSMUST00000225091 230 ntBASIC3.54□□□□□ -1.84
Cdc40Q9DC48 AC158142.1-201ENSMUST00000226721 416 ntBASIC3.54□□□□□ -1.84
Cdc40Q9DC48 Ly6a-201ENSMUST00000023248 819 ntAPPRIS P1 TSL 1 (best) BASIC3.54□□□□□ -1.84
Cdc40Q9DC48 Tsx-201ENSMUST00000033691 812 ntAPPRIS P1 TSL 1 (best) BASIC3.54□□□□□ -1.84
Cdc40Q9DC48 Olfr804-201ENSMUST00000077312 945 ntAPPRIS P1 BASIC3.54□□□□□ -1.84
Cdc40Q9DC48 Zfp600-204ENSMUST00000168483 4244 ntAPPRIS P1 TSL 2 BASIC3.54□□□□□ -1.84
Cdc40Q9DC48 P2ry14-205ENSMUST00000197220 1684 ntAPPRIS P1 TSL 1 (best) BASIC3.54□□□□□ -1.84
Cdc40Q9DC48 Olfr665-202ENSMUST00000215761 2522 ntAPPRIS P1 TSL 5 BASIC3.53□□□□□ -1.84
Cdc40Q9DC48 Gm45159-201ENSMUST00000208630 25241 ntTSL 5 BASIC3.53□□□□□ -1.84
Cdc40Q9DC48 BC051076-202ENSMUST00000199477 2868 ntBASIC3.53□□□□□ -1.84
Cdc40Q9DC48 2310057J18Rik-202ENSMUST00000140558 1445 ntTSL 5 BASIC3.53□□□□□ -1.84
Cdc40Q9DC48 Pramel6-202ENSMUST00000111572 1781 ntAPPRIS P1 TSL 1 (best) BASIC3.53□□□□□ -1.84
Cdc40Q9DC48 Gm43376-202ENSMUST00000199747 1743 ntTSL 1 (best) BASIC3.53□□□□□ -1.84
Cdc40Q9DC48 Hsfy2-201ENSMUST00000062085 1392 ntAPPRIS P1 BASIC3.53□□□□□ -1.84
Cdc40Q9DC48 Gmnc-201ENSMUST00000089832 4083 ntAPPRIS P1 TSL 1 (best) BASIC3.53□□□□□ -1.84
Cdc40Q9DC48 Svs2-201ENSMUST00000044953 1695 ntAPPRIS P1 TSL 1 (best) BASIC3.53□□□□□ -1.84
Cdc40Q9DC48 Olfr1288-202ENSMUST00000214816 1326 ntAPPRIS P1 TSL 5 BASIC3.53□□□□□ -1.84
Cdc40Q9DC48 Olfr112-205ENSMUST00000213274 3558 ntAPPRIS P1 TSL 5 BASIC3.53□□□□□ -1.84
Cdc40Q9DC48 2410141K09Rik-202ENSMUST00000172579 2587 ntAPPRIS P1 TSL 3 BASIC3.53□□□□□ -1.84
Cdc40Q9DC48 Efhc2-201ENSMUST00000026014 2554 ntAPPRIS P1 TSL 1 (best) BASIC3.53□□□□□ -1.84
Cdc40Q9DC48 Gm24715-201ENSMUST00000102377 95 ntBASIC3.53□□□□□ -1.84
Cdc40Q9DC48 Olfr133-201ENSMUST00000113636 1090 ntAPPRIS P1 BASIC3.53□□□□□ -1.84
Cdc40Q9DC48 Gm15783-201ENSMUST00000117521 633 ntBASIC3.53□□□□□ -1.84
Cdc40Q9DC48 Gm13607-201ENSMUST00000117875 539 ntBASIC3.53□□□□□ -1.84
Cdc40Q9DC48 Gm14986-201ENSMUST00000121262 1002 ntBASIC3.53□□□□□ -1.84
Cdc40Q9DC48 Gm16327-201ENSMUST00000137146 228 ntBASIC3.53□□□□□ -1.84
Cdc40Q9DC48 Gm16331-201ENSMUST00000144274 498 ntBASIC3.53□□□□□ -1.84
Cdc40Q9DC48 Gm23753-201ENSMUST00000157575 149 ntBASIC3.53□□□□□ -1.84
Cdc40Q9DC48 Vmn2r-ps74-201ENSMUST00000174705 917 ntBASIC3.53□□□□□ -1.84
Cdc40Q9DC48 Gm22120-201ENSMUST00000175590 70 ntBASIC3.53□□□□□ -1.84
Cdc40Q9DC48 Gm25817-201ENSMUST00000177758 121 ntBASIC3.53□□□□□ -1.84
Cdc40Q9DC48 Gm24766-201ENSMUST00000179182 121 ntBASIC3.53□□□□□ -1.84
Cdc40Q9DC48 9430065F17Rik-202ENSMUST00000180908 1084 ntTSL 1 (best) BASIC3.53□□□□□ -1.84
Cdc40Q9DC48 Scgb2b17-203ENSMUST00000182673 434 ntAPPRIS P2 TSL 2 BASIC3.53□□□□□ -1.84
Cdc40Q9DC48 Scgb2b15-201ENSMUST00000182975 434 ntAPPRIS P1 TSL 2 BASIC3.53□□□□□ -1.84
Cdc40Q9DC48 Mir7676-1-201ENSMUST00000183491 62 ntBASIC3.53□□□□□ -1.84
Cdc40Q9DC48 Mir7676-2-201ENSMUST00000183523 62 ntBASIC3.53□□□□□ -1.84
Cdc40Q9DC48 Gm38088-201ENSMUST00000195829 241 ntBASIC3.53□□□□□ -1.84
Cdc40Q9DC48 Gm44611-201ENSMUST00000207507 355 ntBASIC3.53□□□□□ -1.84
Cdc40Q9DC48 Gm44869-201ENSMUST00000208836 357 ntBASIC3.53□□□□□ -1.84
Cdc40Q9DC48 AC138401.2-201ENSMUST00000220461 365 ntBASIC3.53□□□□□ -1.84
Cdc40Q9DC48 Gm4036-201ENSMUST00000220842 626 ntBASIC3.53□□□□□ -1.84
Cdc40Q9DC48 AC136976.1-201ENSMUST00000221440 381 ntTSL 3 BASIC3.53□□□□□ -1.84
Cdc40Q9DC48 Gm40658-203ENSMUST00000222210 1070 ntTSL 5 BASIC3.53□□□□□ -1.84
Cdc40Q9DC48 AC100733.1-201ENSMUST00000228494 407 ntBASIC3.53□□□□□ -1.84
Cdc40Q9DC48 Olfr943-201ENSMUST00000071617 1079 ntAPPRIS P2 TSL 3 BASIC3.53□□□□□ -1.84
Cdc40Q9DC48 Zfp825-201ENSMUST00000074369 822 ntTSL 5 BASIC3.53□□□□□ -1.84
Cdc40Q9DC48 Olfr1105-201ENSMUST00000099868 939 ntAPPRIS P1 BASIC3.53□□□□□ -1.84
Cdc40Q9DC48 Vmn2r50-202ENSMUST00000086298 2538 ntAPPRIS ALT2 TSL 1 (best) BASIC3.53□□□□□ -1.84
Cdc40Q9DC48 Vmn1r169-205ENSMUST00000228832 2749 ntAPPRIS P1 BASIC3.53□□□□□ -1.84
Cdc40Q9DC48 Vmn1r62-201ENSMUST00000173956 1757 ntAPPRIS P1 BASIC3.53□□□□□ -1.84
Cdc40Q9DC48 Olfr769-202ENSMUST00000215453 4143 ntAPPRIS P1 TSL 5 BASIC3.53□□□□□ -1.84
Cdc40Q9DC48 Gm44078-201ENSMUST00000204652 2646 ntBASIC3.53□□□□□ -1.84
Cdc40Q9DC48 Gm37478-201ENSMUST00000193624 3495 ntBASIC3.53□□□□□ -1.84
Cdc40Q9DC48 Vmn2r-ps47-201ENSMUST00000174515 2557 ntBASIC3.53□□□□□ -1.85
Cdc40Q9DC48 4930467E23Rik-201ENSMUST00000098909 2514 ntAPPRIS P1 TSL 5 BASIC3.52□□□□□ -1.85
Cdc40Q9DC48 Vmn1r34-205ENSMUST00000227332 3075 ntAPPRIS P1 BASIC3.52□□□□□ -1.85
Cdc40Q9DC48 AC126033.1-201ENSMUST00000227628 6773 ntBASIC3.52□□□□□ -1.85
Cdc40Q9DC48 Olfr713-202ENSMUST00000213623 6329 ntAPPRIS P1 TSL 5 BASIC3.52□□□□□ -1.85
Cdc40Q9DC48 Gm43751-201ENSMUST00000200275 3071 ntBASIC3.52□□□□□ -1.85
Cdc40Q9DC48 Gm25727-201ENSMUST00000104522 131 ntBASIC3.52□□□□□ -1.85
Cdc40Q9DC48 Gm15018-201ENSMUST00000117090 633 ntBASIC3.52□□□□□ -1.85
Cdc40Q9DC48 Gm12467-201ENSMUST00000117625 745 ntBASIC3.52□□□□□ -1.85
Cdc40Q9DC48 Gm15377-201ENSMUST00000119594 246 ntBASIC3.52□□□□□ -1.85
Cdc40Q9DC48 Gm14126-201ENSMUST00000122345 395 ntBASIC3.52□□□□□ -1.85
Cdc40Q9DC48 Gm22988-201ENSMUST00000122759 144 ntBASIC3.52□□□□□ -1.85
Cdc40Q9DC48 Gm15461-201ENSMUST00000143488 235 ntTSL 3 BASIC3.52□□□□□ -1.85
Cdc40Q9DC48 Gm22885-201ENSMUST00000157410 107 ntBASIC3.52□□□□□ -1.85
Cdc40Q9DC48 Gm22219-201ENSMUST00000157562 319 ntBASIC3.52□□□□□ -1.85
Cdc40Q9DC48 Gm17732-201ENSMUST00000163259 821 ntAPPRIS P1 BASIC3.52□□□□□ -1.85
Cdc40Q9DC48 Serpina3l-ps-201ENSMUST00000163975 1264 ntBASIC3.52□□□□□ -1.85
Cdc40Q9DC48 Gm17218-201ENSMUST00000165911 410 ntTSL 3 BASIC3.52□□□□□ -1.85
Cdc40Q9DC48 Cylc2-203ENSMUST00000166749 1297 ntAPPRIS P1 TSL 1 (best) BASIC3.52□□□□□ -1.85
Cdc40Q9DC48 Gm17075-201ENSMUST00000171924 670 ntBASIC3.52□□□□□ -1.85
Cdc40Q9DC48 Spin2g-201ENSMUST00000178425 687 ntBASIC3.52□□□□□ -1.85
Cdc40Q9DC48 Gm15099-201ENSMUST00000179833 573 ntTSL 5 BASIC3.52□□□□□ -1.85
Cdc40Q9DC48 Gm26556-201ENSMUST00000180645 320 ntBASIC3.52□□□□□ -1.85
Cdc40Q9DC48 Mir6393-201ENSMUST00000183709 94 ntBASIC3.52□□□□□ -1.85
Cdc40Q9DC48 Mir7047-201ENSMUST00000184595 64 ntBASIC3.52□□□□□ -1.85
Cdc40Q9DC48 Olfr1225-201ENSMUST00000188861 1027 ntAPPRIS P1 BASIC3.52□□□□□ -1.85
Cdc40Q9DC48 4930533P14Rik-201ENSMUST00000189056 583 ntTSL 1 (best) BASIC3.52□□□□□ -1.85
Cdc40Q9DC48 Gm28920-201ENSMUST00000189957 699 ntBASIC3.52□□□□□ -1.85
Cdc40Q9DC48 Gm9722-201ENSMUST00000194568 802 ntBASIC3.52□□□□□ -1.85
Cdc40Q9DC48 Gm567-201ENSMUST00000197127 469 ntTSL 3 BASIC3.52□□□□□ -1.85
Cdc40Q9DC48 Csn1s2b-204ENSMUST00000197301 627 ntAPPRIS ALT2 TSL 5 BASIC3.52□□□□□ -1.85
Cdc40Q9DC48 Gm43975-201ENSMUST00000203023 481 ntBASIC3.52□□□□□ -1.85
Cdc40Q9DC48 Gm44099-201ENSMUST00000203299 112 ntBASIC3.52□□□□□ -1.85
Cdc40Q9DC48 Gm4928-201ENSMUST00000219622 850 ntBASIC3.52□□□□□ -1.85
Cdc40Q9DC48 Gm3829-201ENSMUST00000222362 619 ntBASIC3.52□□□□□ -1.85
Cdc40Q9DC48 AC151902.1-201ENSMUST00000227800 375 ntBASIC3.52□□□□□ -1.85
Cdc40Q9DC48 Gm15421-201ENSMUST00000051985 443 ntTSL 3 BASIC3.52□□□□□ -1.85
Cdc40Q9DC48 Olfr873-201ENSMUST00000053919 1062 ntAPPRIS P2 BASIC3.52□□□□□ -1.85
Cdc40Q9DC48 mt-Nd1-201ENSMUST00000082392 957 ntAPPRIS P1 BASIC3.52□□□□□ -1.85
Cdc40Q9DC48 Gm24144-201ENSMUST00000082632 111 ntBASIC3.52□□□□□ -1.85
Cdc40Q9DC48 Gm25739-201ENSMUST00000082886 107 ntBASIC3.52□□□□□ -1.85
Cdc40Q9DC48 Gm23443-201ENSMUST00000082916 128 ntBASIC3.52□□□□□ -1.85
Retrieved 100 of 76,532 protein–RNA pairs in 68.4 ms