Protein–RNA interactions for Protein: Q9D6Y1

Ccdc3, Coiled-coil domain-containing protein 3, mousemouse

Predictions only

Length 273 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc3Q9D6Y1 Gm14977-201ENSMUST00000121626 812 ntBASIC3.55□□□□□ -1.84
Ccdc3Q9D6Y1 Gm16068-201ENSMUST00000136557 504 ntTSL 3 BASIC3.55□□□□□ -1.84
Ccdc3Q9D6Y1 Trim30e-ps1-202ENSMUST00000151294 731 ntBASIC3.55□□□□□ -1.84
Ccdc3Q9D6Y1 Gm23602-201ENSMUST00000157258 132 ntBASIC3.55□□□□□ -1.84
Ccdc3Q9D6Y1 Gm24244-201ENSMUST00000157317 130 ntBASIC3.55□□□□□ -1.84
Ccdc3Q9D6Y1 Gm22519-201ENSMUST00000158270 178 ntBASIC3.55□□□□□ -1.84
Ccdc3Q9D6Y1 Gm20399-201ENSMUST00000174652 132 ntBASIC3.55□□□□□ -1.84
Ccdc3Q9D6Y1 Gm20693-201ENSMUST00000177431 211 ntBASIC3.55□□□□□ -1.84
Ccdc3Q9D6Y1 Gm20822-202ENSMUST00000188422 1229 ntAPPRIS P1 TSL 1 (best) BASIC3.55□□□□□ -1.84
Ccdc3Q9D6Y1 4930533P14Rik-201ENSMUST00000189056 583 ntTSL 1 (best) BASIC3.55□□□□□ -1.84
Ccdc3Q9D6Y1 Gm20828-202ENSMUST00000190516 1229 ntAPPRIS P1 TSL 1 (best) BASIC3.55□□□□□ -1.84
Ccdc3Q9D6Y1 Gm36934-201ENSMUST00000192007 306 ntBASIC3.55□□□□□ -1.84
Ccdc3Q9D6Y1 AC153971.2-201ENSMUST00000214553 777 ntBASIC3.55□□□□□ -1.84
Ccdc3Q9D6Y1 AL772397.1-201ENSMUST00000216707 606 ntBASIC3.55□□□□□ -1.84
Ccdc3Q9D6Y1 AC151730.2-201ENSMUST00000224027 475 ntBASIC3.55□□□□□ -1.84
Ccdc3Q9D6Y1 Prl8a1-201ENSMUST00000006664 864 ntAPPRIS P1 TSL 1 (best) BASIC3.55□□□□□ -1.84
Ccdc3Q9D6Y1 Mir133a-2-201ENSMUST00000083526 104 ntBASIC3.55□□□□□ -1.84
Ccdc3Q9D6Y1 Vmn1r203-201ENSMUST00000091729 936 ntAPPRIS P1 BASIC3.55□□□□□ -1.84
Ccdc3Q9D6Y1 Olfr583-201ENSMUST00000098211 960 ntAPPRIS P1 BASIC3.55□□□□□ -1.84
Ccdc3Q9D6Y1 Olfr1111-201ENSMUST00000099860 940 ntAPPRIS P1 BASIC3.55□□□□□ -1.84
Ccdc3Q9D6Y1 Olfr392-201ENSMUST00000118463 3643 ntAPPRIS P1 TSL 2 BASIC3.55□□□□□ -1.84
Ccdc3Q9D6Y1 Gm5447-201ENSMUST00000070258 1773 ntAPPRIS P1 BASIC3.55□□□□□ -1.84
Ccdc3Q9D6Y1 Nebl-207ENSMUST00000132418 1734 ntTSL 1 (best) BASIC3.55□□□□□ -1.84
Ccdc3Q9D6Y1 Gm14443-201ENSMUST00000109054 4516 ntAPPRIS P1 TSL 5 BASIC3.55□□□□□ -1.84
Ccdc3Q9D6Y1 Zfp945-205ENSMUST00000160457 6497 ntAPPRIS P4 TSL 1 (best) BASIC3.54□□□□□ -1.84
Ccdc3Q9D6Y1 Zfp458-201ENSMUST00000045969 3488 ntAPPRIS P2 TSL 1 (best) BASIC3.54□□□□□ -1.84
Ccdc3Q9D6Y1 Olfr736-202ENSMUST00000213402 2402 ntAPPRIS P1 TSL 5 BASIC3.54□□□□□ -1.84
Ccdc3Q9D6Y1 Olfr816-202ENSMUST00000213438 3306 ntAPPRIS P1 TSL 5 BASIC3.54□□□□□ -1.84
Ccdc3Q9D6Y1 Lyst-201ENSMUST00000110559 13181 ntAPPRIS P1 TSL 1 (best) BASIC3.54□□□□□ -1.84
Ccdc3Q9D6Y1 AC126033.1-201ENSMUST00000227628 6773 ntBASIC3.54□□□□□ -1.84
Ccdc3Q9D6Y1 Gm10375-201ENSMUST00000100692 836 ntAPPRIS P1 TSL 1 (best) BASIC3.54□□□□□ -1.84
Ccdc3Q9D6Y1 Mir673-201ENSMUST00000102361 91 ntBASIC3.54□□□□□ -1.84
Ccdc3Q9D6Y1 Gm13943-201ENSMUST00000144043 343 ntTSL 5 BASIC3.54□□□□□ -1.84
Ccdc3Q9D6Y1 Gm8224-201ENSMUST00000166178 497 ntBASIC3.54□□□□□ -1.84
Ccdc3Q9D6Y1 Olfr296-ps1-201ENSMUST00000173904 1102 ntAPPRIS P1 TSL 5 BASIC3.54□□□□□ -1.84
Ccdc3Q9D6Y1 Gm20834-201ENSMUST00000179558 684 ntAPPRIS P1 BASIC3.54□□□□□ -1.84
Ccdc3Q9D6Y1 Obox4-ps1-201ENSMUST00000184446 700 ntBASIC3.54□□□□□ -1.84
Ccdc3Q9D6Y1 Gm28591-201ENSMUST00000185259 183 ntBASIC3.54□□□□□ -1.84
Ccdc3Q9D6Y1 Gm8600-201ENSMUST00000186320 905 ntBASIC3.54□□□□□ -1.84
Ccdc3Q9D6Y1 Gm29576-201ENSMUST00000188020 678 ntBASIC3.54□□□□□ -1.84
Ccdc3Q9D6Y1 Gm28354-201ENSMUST00000190904 678 ntBASIC3.54□□□□□ -1.84
Ccdc3Q9D6Y1 Rhoay-ps1-201ENSMUST00000191243 581 ntBASIC3.54□□□□□ -1.84
Ccdc3Q9D6Y1 Smcp-202ENSMUST00000194965 744 ntAPPRIS P1 TSL 3 BASIC3.54□□□□□ -1.84
Ccdc3Q9D6Y1 Gm3143-202ENSMUST00000198364 675 ntTSL 2 BASIC3.54□□□□□ -1.84
Ccdc3Q9D6Y1 Tshb-206ENSMUST00000200041 537 ntAPPRIS P1 TSL 5 BASIC3.54□□□□□ -1.84
Ccdc3Q9D6Y1 Gm18861-201ENSMUST00000202509 1186 ntBASIC3.54□□□□□ -1.84
Ccdc3Q9D6Y1 Gm44118-201ENSMUST00000204665 229 ntBASIC3.54□□□□□ -1.84
Ccdc3Q9D6Y1 Spcs2-205ENSMUST00000207580 868 ntTSL 5 BASIC3.54□□□□□ -1.84
Ccdc3Q9D6Y1 Gm17989-201ENSMUST00000211543 412 ntBASIC3.54□□□□□ -1.84
Ccdc3Q9D6Y1 AC154851.2-201ENSMUST00000222172 644 ntBASIC3.54□□□□□ -1.84
Ccdc3Q9D6Y1 AC154598.1-201ENSMUST00000227079 347 ntBASIC3.54□□□□□ -1.84
Ccdc3Q9D6Y1 Gm10282-201ENSMUST00000075602 1151 ntAPPRIS P1 BASIC3.54□□□□□ -1.84
Ccdc3Q9D6Y1 Olfr469-201ENSMUST00000075704 945 ntAPPRIS P1 BASIC3.54□□□□□ -1.84
Ccdc3Q9D6Y1 Olfr1465-201ENSMUST00000080142 924 ntAPPRIS P1 BASIC3.54□□□□□ -1.84
Ccdc3Q9D6Y1 Gm25800-201ENSMUST00000082636 134 ntBASIC3.54□□□□□ -1.84
Ccdc3Q9D6Y1 Gm24950-201ENSMUST00000082768 191 ntBASIC3.54□□□□□ -1.84
Ccdc3Q9D6Y1 Gm23971-201ENSMUST00000083317 191 ntBASIC3.54□□□□□ -1.84
Ccdc3Q9D6Y1 Gm23849-201ENSMUST00000083833 191 ntBASIC3.54□□□□□ -1.84
Ccdc3Q9D6Y1 Gm26316-201ENSMUST00000083886 191 ntBASIC3.54□□□□□ -1.84
Ccdc3Q9D6Y1 Rnu2-10-201ENSMUST00000084010 191 ntBASIC3.54□□□□□ -1.84
Ccdc3Q9D6Y1 Gm45389-201ENSMUST00000211163 3399 ntTSL 1 (best) BASIC3.54□□□□□ -1.84
Ccdc3Q9D6Y1 Neb-203ENSMUST00000075301 21456 ntAPPRIS ALT2 TSL 5 BASIC3.54□□□□□ -1.84
Ccdc3Q9D6Y1 Fbxw16-201ENSMUST00000084984 1497 ntAPPRIS P1 TSL 1 (best) BASIC3.54□□□□□ -1.84
Ccdc3Q9D6Y1 Vmn2r101-201ENSMUST00000171914 2574 ntAPPRIS P1 TSL 5 BASIC3.54□□□□□ -1.84
Ccdc3Q9D6Y1 Gm5127-202ENSMUST00000101297 1809 ntAPPRIS P1 TSL 1 (best) BASIC3.54□□□□□ -1.84
Ccdc3Q9D6Y1 Olfr665-202ENSMUST00000215761 2522 ntAPPRIS P1 TSL 5 BASIC3.53□□□□□ -1.84
Ccdc3Q9D6Y1 Gm18594-201ENSMUST00000175733 1403 ntBASIC3.53□□□□□ -1.84
Ccdc3Q9D6Y1 3110062G12Rik-201ENSMUST00000192113 1419 ntBASIC3.53□□□□□ -1.84
Ccdc3Q9D6Y1 9330159F19Rik-201ENSMUST00000092627 5681 ntAPPRIS P1 TSL 1 (best) BASIC3.53□□□□□ -1.84
Ccdc3Q9D6Y1 Olfr873-205ENSMUST00000215540 3784 ntAPPRIS ALT2 TSL 5 BASIC3.53□□□□□ -1.84
Ccdc3Q9D6Y1 Olfr1484-205ENSMUST00000216369 3764 ntTSL 5 BASIC3.53□□□□□ -1.84
Ccdc3Q9D6Y1 Gm44525-201ENSMUST00000183129 2634 ntBASIC3.53□□□□□ -1.84
Ccdc3Q9D6Y1 Mkln1-201ENSMUST00000026699 11395 ntAPPRIS P1 TSL 1 (best) BASIC3.53□□□□□ -1.84
Ccdc3Q9D6Y1 Gm15060-201ENSMUST00000119550 948 ntBASIC3.53□□□□□ -1.84
Ccdc3Q9D6Y1 Gm14775-201ENSMUST00000122089 310 ntBASIC3.53□□□□□ -1.84
Ccdc3Q9D6Y1 4930412F09Rik-201ENSMUST00000139006 1017 ntTSL 1 (best) BASIC3.53□□□□□ -1.84
Ccdc3Q9D6Y1 Sox5it-201ENSMUST00000144026 1207 ntTSL 1 (best) BASIC3.53□□□□□ -1.84
Ccdc3Q9D6Y1 Gm23391-201ENSMUST00000157579 104 ntBASIC3.53□□□□□ -1.84
Ccdc3Q9D6Y1 Gm22890-201ENSMUST00000158642 144 ntBASIC3.53□□□□□ -1.84
Ccdc3Q9D6Y1 R3hcc1l-202ENSMUST00000160107 950 ntAPPRIS ALT2 TSL 2 BASIC3.53□□□□□ -1.84
Ccdc3Q9D6Y1 Vmn1r163-201ENSMUST00000164537 924 ntAPPRIS P1 BASIC3.53□□□□□ -1.84
Ccdc3Q9D6Y1 Vmn1r117-201ENSMUST00000166937 924 ntAPPRIS P1 BASIC3.53□□□□□ -1.84
Ccdc3Q9D6Y1 Vmn1r135-201ENSMUST00000170931 924 ntAPPRIS P1 BASIC3.53□□□□□ -1.84
Ccdc3Q9D6Y1 Vmn1r143-201ENSMUST00000171622 924 ntAPPRIS P1 BASIC3.53□□□□□ -1.84
Ccdc3Q9D6Y1 Gm17711-201ENSMUST00000172028 237 ntBASIC3.53□□□□□ -1.84
Ccdc3Q9D6Y1 Vmn1r-ps71-201ENSMUST00000172648 924 ntBASIC3.53□□□□□ -1.84
Ccdc3Q9D6Y1 Gm26141-201ENSMUST00000175299 126 ntBASIC3.53□□□□□ -1.84
Ccdc3Q9D6Y1 Gm27903-201ENSMUST00000175482 126 ntBASIC3.53□□□□□ -1.84
Ccdc3Q9D6Y1 Obox4-ps29-201ENSMUST00000175956 1134 ntBASIC3.53□□□□□ -1.84
Ccdc3Q9D6Y1 Gm29387-201ENSMUST00000189074 623 ntTSL 3 BASIC3.53□□□□□ -1.84
Ccdc3Q9D6Y1 Gm37803-201ENSMUST00000191620 711 ntTSL 5 BASIC3.53□□□□□ -1.84
Ccdc3Q9D6Y1 Gm36997-201ENSMUST00000195090 707 ntBASIC3.53□□□□□ -1.84
Ccdc3Q9D6Y1 Gm42625-201ENSMUST00000198611 922 ntBASIC3.53□□□□□ -1.84
Ccdc3Q9D6Y1 Gm4859-201ENSMUST00000199625 787 ntBASIC3.53□□□□□ -1.84
Ccdc3Q9D6Y1 Ube2l3-ps1-201ENSMUST00000199777 436 ntBASIC3.53□□□□□ -1.84
Ccdc3Q9D6Y1 Znrd1as-204ENSMUST00000209623 1218 ntAPPRIS ALT2 TSL 5 BASIC3.53□□□□□ -1.84
Ccdc3Q9D6Y1 Gm18194-201ENSMUST00000210455 481 ntBASIC3.53□□□□□ -1.84
Ccdc3Q9D6Y1 E330011O21Rik-203ENSMUST00000210555 455 ntTSL 5 BASIC3.53□□□□□ -1.84
Ccdc3Q9D6Y1 Gm5358-201ENSMUST00000212814 353 ntBASIC3.53□□□□□ -1.84
Ccdc3Q9D6Y1 Gm45830-201ENSMUST00000212945 344 ntTSL 5 BASIC3.53□□□□□ -1.84
Retrieved 100 of 76,532 protein–RNA pairs in 105.9 ms