Protein–RNA interactions for Protein: Q9D0R4

Ddx56, Probable ATP-dependent RNA helicase DDX56, mousemouse

Known RBP Predictions only

Length 546 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ddx56Q9D0R4 Gm5709-201ENSMUST00000177879 1165 ntBASIC5.04□□□□□ -1.6
Ddx56Q9D0R4 1810022K09Rik-204ENSMUST00000186870 1174 ntAPPRIS ALT2 TSL 1 (best) BASIC5.04□□□□□ -1.6
Ddx56Q9D0R4 Gm37468-201ENSMUST00000194767 854 ntTSL 1 (best) BASIC5.04□□□□□ -1.6
Ddx56Q9D0R4 Gm45316-201ENSMUST00000210128 162 ntBASIC5.04□□□□□ -1.6
Ddx56Q9D0R4 Olfr1266-ps1-201ENSMUST00000214850 180 ntBASIC5.04□□□□□ -1.6
Ddx56Q9D0R4 AC124399.1-201ENSMUST00000218334 590 ntBASIC5.04□□□□□ -1.6
Ddx56Q9D0R4 AC091764.3-201ENSMUST00000219646 300 ntTSL 5 BASIC5.04□□□□□ -1.6
Ddx56Q9D0R4 AC159239.1-201ENSMUST00000221767 603 ntTSL 3 BASIC5.04□□□□□ -1.6
Ddx56Q9D0R4 1110057P08Rik-201ENSMUST00000089097 465 ntAPPRIS P1 BASIC5.04□□□□□ -1.6
Ddx56Q9D0R4 Vmn2r-ps11-201ENSMUST00000176568 2730 ntBASIC5.04□□□□□ -1.6
Ddx56Q9D0R4 Gm3675-201ENSMUST00000175904 1653 ntBASIC5.04□□□□□ -1.6
Ddx56Q9D0R4 Vmn1r39-203ENSMUST00000227285 2245 ntAPPRIS ALT2 BASIC5.04□□□□□ -1.6
Ddx56Q9D0R4 Gm42729-201ENSMUST00000201770 2930 ntBASIC5.03□□□□□ -1.6
Ddx56Q9D0R4 Gm37868-201ENSMUST00000195578 2735 ntBASIC5.03□□□□□ -1.6
Ddx56Q9D0R4 Vmn1r39-206ENSMUST00000228651 2144 ntAPPRIS ALT2 BASIC5.03□□□□□ -1.6
Ddx56Q9D0R4 Gm43259-201ENSMUST00000198446 3277 ntBASIC5.03□□□□□ -1.6
Ddx56Q9D0R4 Gm40909-202ENSMUST00000223275 5564 ntTSL 5 BASIC5.03□□□□□ -1.6
Ddx56Q9D0R4 Ago2-201ENSMUST00000044113 13705 ntAPPRIS P1 TSL 1 (best) BASIC5.03□□□□□ -1.6
Ddx56Q9D0R4 Nlrp4d-201ENSMUST00000182420 2946 ntBASIC5.03□□□□□ -1.6
Ddx56Q9D0R4 Igkv6-15-201ENSMUST00000103393 347 ntAPPRIS P1 BASIC5.03□□□□□ -1.6
Ddx56Q9D0R4 Gm25876-201ENSMUST00000104329 119 ntBASIC5.03□□□□□ -1.6
Ddx56Q9D0R4 Olfr379-ps1-201ENSMUST00000117349 934 ntAPPRIS P1 BASIC5.03□□□□□ -1.6
Ddx56Q9D0R4 Gm11429-201ENSMUST00000119089 144 ntBASIC5.03□□□□□ -1.6
Ddx56Q9D0R4 Gm13273-201ENSMUST00000119737 159 ntBASIC5.03□□□□□ -1.6
Ddx56Q9D0R4 Gm14619-201ENSMUST00000120480 168 ntBASIC5.03□□□□□ -1.6
Ddx56Q9D0R4 Gm15926-201ENSMUST00000120492 550 ntBASIC5.03□□□□□ -1.6
Ddx56Q9D0R4 Gm13720-201ENSMUST00000120741 196 ntBASIC5.03□□□□□ -1.6
Ddx56Q9D0R4 Vmn1r-ps135-201ENSMUST00000120909 595 ntBASIC5.03□□□□□ -1.6
Ddx56Q9D0R4 Vmn2r-ps2-201ENSMUST00000121053 765 ntBASIC5.03□□□□□ -1.6
Ddx56Q9D0R4 Gm11894-201ENSMUST00000121579 328 ntBASIC5.03□□□□□ -1.6
Ddx56Q9D0R4 Gm15537-201ENSMUST00000126677 485 ntTSL 2 BASIC5.03□□□□□ -1.6
Ddx56Q9D0R4 Gm16365-204ENSMUST00000143877 779 ntTSL 2 BASIC5.03□□□□□ -1.6
Ddx56Q9D0R4 Gm14697-201ENSMUST00000147144 648 ntTSL 1 (best) BASIC5.03□□□□□ -1.6
Ddx56Q9D0R4 Gm23167-201ENSMUST00000157155 103 ntBASIC5.03□□□□□ -1.6
Ddx56Q9D0R4 Gm23327-201ENSMUST00000157420 78 ntBASIC5.03□□□□□ -1.6
Ddx56Q9D0R4 Gm26393-201ENSMUST00000157625 129 ntBASIC5.03□□□□□ -1.6
Ddx56Q9D0R4 Gm25666-201ENSMUST00000157702 107 ntBASIC5.03□□□□□ -1.6
Ddx56Q9D0R4 Gm9593-201ENSMUST00000166034 469 ntBASIC5.03□□□□□ -1.6
Ddx56Q9D0R4 Arpp19-211ENSMUST00000170310 899 ntTSL 3 BASIC5.03□□□□□ -1.6
Ddx56Q9D0R4 Vmn1r-ps150-201ENSMUST00000176659 736 ntBASIC5.03□□□□□ -1.6
Ddx56Q9D0R4 Gm7094-201ENSMUST00000178379 366 ntBASIC5.03□□□□□ -1.6
Ddx56Q9D0R4 1500004A13Rik-206ENSMUST00000184170 576 ntTSL 3 BASIC5.03□□□□□ -1.6
Ddx56Q9D0R4 Gm28889-201ENSMUST00000185350 959 ntTSL 5 BASIC5.03□□□□□ -1.6
Ddx56Q9D0R4 Mrgprb1-202ENSMUST00000188095 472 ntTSL 3 BASIC5.03□□□□□ -1.6
Ddx56Q9D0R4 Gm29000-207ENSMUST00000190152 1160 ntTSL 5 BASIC5.03□□□□□ -1.6
Ddx56Q9D0R4 Rps27a-ps1-201ENSMUST00000191424 463 ntBASIC5.03□□□□□ -1.6
Ddx56Q9D0R4 AC136146.1-201ENSMUST00000196180 91 ntBASIC5.03□□□□□ -1.6
Ddx56Q9D0R4 Gm43109-201ENSMUST00000198269 753 ntTSL 3 BASIC5.03□□□□□ -1.6
Ddx56Q9D0R4 Gm44485-201ENSMUST00000199569 137 ntBASIC5.03□□□□□ -1.6
Ddx56Q9D0R4 Gm43919-201ENSMUST00000204303 364 ntBASIC5.03□□□□□ -1.6
Ddx56Q9D0R4 Gm17838-201ENSMUST00000205872 876 ntBASIC5.03□□□□□ -1.6
Ddx56Q9D0R4 Gm44816-201ENSMUST00000206666 477 ntBASIC5.03□□□□□ -1.6
Ddx56Q9D0R4 Gm18127-201ENSMUST00000208479 725 ntBASIC5.03□□□□□ -1.6
Ddx56Q9D0R4 AC145731.1-201ENSMUST00000214083 344 ntTSL 5 BASIC5.03□□□□□ -1.6
Ddx56Q9D0R4 Gm7753-201ENSMUST00000221007 867 ntBASIC5.03□□□□□ -1.6
Ddx56Q9D0R4 AC133498.1-203ENSMUST00000221213 668 ntTSL 3 BASIC5.03□□□□□ -1.6
Ddx56Q9D0R4 AC134254.5-201ENSMUST00000223436 400 ntBASIC5.03□□□□□ -1.6
Ddx56Q9D0R4 Gm23302-201ENSMUST00000082710 100 ntBASIC5.03□□□□□ -1.6
Ddx56Q9D0R4 Gm24611-201ENSMUST00000083272 107 ntBASIC5.03□□□□□ -1.6
Ddx56Q9D0R4 Olfr893-201ENSMUST00000093867 942 ntAPPRIS P2 BASIC5.03□□□□□ -1.6
Ddx56Q9D0R4 Olfr1164-201ENSMUST00000099834 1112 ntAPPRIS P1 BASIC5.03□□□□□ -1.6
Ddx56Q9D0R4 Fam71d-205ENSMUST00000219551 1601 ntAPPRIS ALT2 TSL 1 (best) BASIC5.03□□□□□ -1.6
Ddx56Q9D0R4 Hrnr-202ENSMUST00000093774 11187 ntAPPRIS ALT2 TSL 1 (best) BASIC5.03□□□□□ -1.6
Ddx56Q9D0R4 Svet1-201ENSMUST00000209370 3940 ntBASIC5.03□□□□□ -1.6
Ddx56Q9D0R4 Rgs17-202ENSMUST00000064225 8191 ntTSL 1 (best) BASIC5.03□□□□□ -1.6
Ddx56Q9D0R4 Olfr106-ps-202ENSMUST00000214704 1791 ntAPPRIS P1 TSL 5 BASIC5.03□□□□□ -1.6
Ddx56Q9D0R4 Gm42559-201ENSMUST00000201811 3532 ntBASIC5.03□□□□□ -1.6
Ddx56Q9D0R4 Abi3bp-202ENSMUST00000096012 4387 ntAPPRIS ALT2 TSL 1 (best) BASIC5.03□□□□□ -1.6
Ddx56Q9D0R4 Zfy1-201ENSMUST00000065545 2783 ntAPPRIS P1 TSL 1 (best) BASIC5.03□□□□□ -1.6
Ddx56Q9D0R4 Vmn2r106-201ENSMUST00000167464 2589 ntAPPRIS P1 TSL 5 BASIC5.03□□□□□ -1.6
Ddx56Q9D0R4 Gm43197-201ENSMUST00000201493 2583 ntBASIC5.03□□□□□ -1.6
Ddx56Q9D0R4 6720427I07Rik-201ENSMUST00000181490 2300 ntBASIC5.02□□□□□ -1.61
Ddx56Q9D0R4 Btbd35f19-201ENSMUST00000178444 1960 ntAPPRIS P1 BASIC5.02□□□□□ -1.61
Ddx56Q9D0R4 Btbd35f20-201ENSMUST00000179325 1960 ntAPPRIS P1 BASIC5.02□□□□□ -1.61
Ddx56Q9D0R4 Olfr1104-203ENSMUST00000215972 2797 ntAPPRIS P1 TSL 5 BASIC5.02□□□□□ -1.61
Ddx56Q9D0R4 AC187103.2-201ENSMUST00000223605 1617 ntBASIC5.02□□□□□ -1.61
Ddx56Q9D0R4 AC121569.1-201ENSMUST00000221043 3666 ntTSL 1 (best) BASIC5.02□□□□□ -1.61
Ddx56Q9D0R4 Trbv21-201ENSMUST00000103278 290 ntAPPRIS P1 BASIC5.02□□□□□ -1.61
Ddx56Q9D0R4 Trav8n-2-201ENSMUST00000103632 408 ntAPPRIS P1 BASIC5.02□□□□□ -1.61
Ddx56Q9D0R4 Vmn1r3-201ENSMUST00000105159 1011 ntAPPRIS P1 BASIC5.02□□□□□ -1.61
Ddx56Q9D0R4 Vmn1r2-201ENSMUST00000105160 921 ntAPPRIS P1 BASIC5.02□□□□□ -1.61
Ddx56Q9D0R4 Sult2a1-201ENSMUST00000108522 1020 ntAPPRIS P1 TSL 1 (best) BASIC5.02□□□□□ -1.61
Ddx56Q9D0R4 Gm14469-201ENSMUST00000118363 202 ntBASIC5.02□□□□□ -1.61
Ddx56Q9D0R4 Gm11219-201ENSMUST00000118565 358 ntBASIC5.02□□□□□ -1.61
Ddx56Q9D0R4 Gm12808-201ENSMUST00000120597 404 ntBASIC5.02□□□□□ -1.61
Ddx56Q9D0R4 Gm16179-201ENSMUST00000120685 373 ntBASIC5.02□□□□□ -1.61
Ddx56Q9D0R4 Olfr404-ps1-201ENSMUST00000121065 972 ntAPPRIS P1 BASIC5.02□□□□□ -1.61
Ddx56Q9D0R4 Gm6565-201ENSMUST00000121217 438 ntBASIC5.02□□□□□ -1.61
Ddx56Q9D0R4 Gm23463-201ENSMUST00000122468 99 ntBASIC5.02□□□□□ -1.61
Ddx56Q9D0R4 Tnfaip8-203ENSMUST00000126666 906 ntTSL 2 BASIC5.02□□□□□ -1.61
Ddx56Q9D0R4 Gm14710-201ENSMUST00000146082 1066 ntBASIC5.02□□□□□ -1.61
Ddx56Q9D0R4 Gm24393-201ENSMUST00000158135 97 ntBASIC5.02□□□□□ -1.61
Ddx56Q9D0R4 Vmn1r238-201ENSMUST00000165255 921 ntAPPRIS P1 BASIC5.02□□□□□ -1.61
Ddx56Q9D0R4 Gm26177-201ENSMUST00000178683 107 ntBASIC5.02□□□□□ -1.61
Ddx56Q9D0R4 Gm27007-201ENSMUST00000183264 279 ntTSL 3 BASIC5.02□□□□□ -1.61
Ddx56Q9D0R4 Gm27952-201ENSMUST00000184748 105 ntBASIC5.02□□□□□ -1.61
Ddx56Q9D0R4 Snhg14-201ENSMUST00000185272 726 ntTSL 5 BASIC5.02□□□□□ -1.61
Ddx56Q9D0R4 1700060O08Rik-201ENSMUST00000185390 281 ntTSL 1 (best) BASIC5.02□□□□□ -1.61
Ddx56Q9D0R4 Gm21865-202ENSMUST00000191443 923 ntAPPRIS P1 TSL 1 (best) BASIC5.02□□□□□ -1.61
Ddx56Q9D0R4 2610001A08Rik-201ENSMUST00000193315 867 ntBASIC5.02□□□□□ -1.61
Retrieved 100 of 76,532 protein–RNA pairs in 78.6 ms