Protein–RNA interactions for Protein: Q9CU62

Smc1a, Structural maintenance of chromosomes protein 1A, mousemouse

Known RBP Predictions only

Length 1,233 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smc1aQ9CU62 Gm17106-201ENSMUST00000105610 459 ntTSL 5 BASIC4.39□□□□□ -1.71
Smc1aQ9CU62 Gm3443-201ENSMUST00000112772 285 ntAPPRIS P1 TSL 3 BASIC4.39□□□□□ -1.71
Smc1aQ9CU62 Gm3835-201ENSMUST00000120752 403 ntBASIC4.39□□□□□ -1.71
Smc1aQ9CU62 Olfr1397-ps1-201ENSMUST00000121388 962 ntBASIC4.39□□□□□ -1.71
Smc1aQ9CU62 Gm14435-202ENSMUST00000127687 1127 ntAPPRIS ALT2 TSL 1 (best) BASIC4.39□□□□□ -1.71
Smc1aQ9CU62 Scml1-201ENSMUST00000136860 576 ntTSL 3 BASIC4.39□□□□□ -1.71
Smc1aQ9CU62 Sval2-201ENSMUST00000014248 585 ntAPPRIS P1 TSL 1 (best) BASIC4.39□□□□□ -1.71
Smc1aQ9CU62 Ighv6-5-201ENSMUST00000179796 297 ntAPPRIS P1 BASIC4.39□□□□□ -1.71
Smc1aQ9CU62 Gm28439-201ENSMUST00000187714 876 ntBASIC4.39□□□□□ -1.71
Smc1aQ9CU62 Gm18900-201ENSMUST00000193218 584 ntBASIC4.39□□□□□ -1.71
Smc1aQ9CU62 Gm44134-201ENSMUST00000203064 661 ntTSL 2 BASIC4.39□□□□□ -1.71
Smc1aQ9CU62 AL772397.1-201ENSMUST00000216707 606 ntBASIC4.39□□□□□ -1.71
Smc1aQ9CU62 Gm32281-202ENSMUST00000217220 691 ntTSL 3 BASIC4.39□□□□□ -1.71
Smc1aQ9CU62 Gm7034-201ENSMUST00000218638 645 ntBASIC4.39□□□□□ -1.71
Smc1aQ9CU62 Gm30624-201ENSMUST00000220039 628 ntTSL 3 BASIC4.39□□□□□ -1.71
Smc1aQ9CU62 Gpx8-201ENSMUST00000022282 1018 ntAPPRIS P1 TSL 1 (best) BASIC4.39□□□□□ -1.71
Smc1aQ9CU62 Olfr729-201ENSMUST00000061020 972 ntAPPRIS P1 BASIC4.39□□□□□ -1.71
Smc1aQ9CU62 Zfp982-201ENSMUST00000063704 1244 ntAPPRIS P1 TSL 3 BASIC4.39□□□□□ -1.71
Smc1aQ9CU62 Olfr945-201ENSMUST00000076903 963 ntAPPRIS P2 BASIC4.39□□□□□ -1.71
Smc1aQ9CU62 Ang6-201ENSMUST00000096869 444 ntAPPRIS P1 BASIC4.39□□□□□ -1.71
Smc1aQ9CU62 Bcl2a1a-201ENSMUST00000098485 819 ntAPPRIS P1 TSL 1 (best) BASIC4.39□□□□□ -1.71
Smc1aQ9CU62 Gm29114-201ENSMUST00000187100 2508 ntTSL 1 (best) BASIC4.39□□□□□ -1.71
Smc1aQ9CU62 Zfp638-206ENSMUST00000203324 3822 ntAPPRIS ALT2 TSL 5 BASIC4.39□□□□□ -1.71
Smc1aQ9CU62 Gm6215-201ENSMUST00000119297 1386 ntBASIC4.39□□□□□ -1.71
Smc1aQ9CU62 Gm13912-201ENSMUST00000156541 1860 ntTSL 1 (best) BASIC4.39□□□□□ -1.71
Smc1aQ9CU62 Cngb3-201ENSMUST00000102999 4708 ntAPPRIS P1 TSL 1 (best) BASIC4.38□□□□□ -1.71
Smc1aQ9CU62 Zfp992-201ENSMUST00000105733 4550 ntAPPRIS P1 TSL 3 BASIC4.38□□□□□ -1.71
Smc1aQ9CU62 AC173482.1-201ENSMUST00000224494 3815 ntBASIC4.38□□□□□ -1.71
Smc1aQ9CU62 Enam-202ENSMUST00000199104 4171 ntAPPRIS ALT2 TSL 1 (best) BASIC4.38□□□□□ -1.71
Smc1aQ9CU62 Olfr1042-202ENSMUST00000215624 5096 ntAPPRIS P1 BASIC4.38□□□□□ -1.71
Smc1aQ9CU62 Vmn1r74-202ENSMUST00000228471 6608 ntAPPRIS P1 BASIC4.38□□□□□ -1.71
Smc1aQ9CU62 Igkv5-45-201ENSMUST00000103366 385 ntAPPRIS P1 BASIC4.38□□□□□ -1.71
Smc1aQ9CU62 Olfr1288-201ENSMUST00000104889 939 ntAPPRIS P1 BASIC4.38□□□□□ -1.71
Smc1aQ9CU62 S100a5-202ENSMUST00000107329 431 ntAPPRIS P1 TSL 1 (best) BASIC4.38□□□□□ -1.71
Smc1aQ9CU62 Olfr133-201ENSMUST00000113636 1090 ntAPPRIS P1 BASIC4.38□□□□□ -1.71
Smc1aQ9CU62 Gm23226-201ENSMUST00000116927 103 ntBASIC4.38□□□□□ -1.71
Smc1aQ9CU62 Gm15151-201ENSMUST00000117106 177 ntBASIC4.38□□□□□ -1.71
Smc1aQ9CU62 Gm14890-201ENSMUST00000117660 676 ntBASIC4.38□□□□□ -1.71
Smc1aQ9CU62 Gm9432-201ENSMUST00000117810 759 ntBASIC4.38□□□□□ -1.71
Smc1aQ9CU62 Gm13064-201ENSMUST00000119125 557 ntBASIC4.38□□□□□ -1.71
Smc1aQ9CU62 Gm15313-201ENSMUST00000119179 282 ntBASIC4.38□□□□□ -1.71
Smc1aQ9CU62 4931428L18Rik-202ENSMUST00000135245 889 ntAPPRIS P5 TSL 1 (best) BASIC4.38□□□□□ -1.71
Smc1aQ9CU62 Gm24930-201ENSMUST00000158315 83 ntBASIC4.38□□□□□ -1.71
Smc1aQ9CU62 Slc9c1-201ENSMUST00000159945 3836 ntAPPRIS P1 TSL 1 (best) BASIC4.38□□□□□ -1.71
Smc1aQ9CU62 Gm8653-201ENSMUST00000163096 924 ntAPPRIS P1 BASIC4.38□□□□□ -1.71
Smc1aQ9CU62 Gm6164-201ENSMUST00000169774 924 ntAPPRIS P1 BASIC4.38□□□□□ -1.71
Smc1aQ9CU62 Vmn1r224-201ENSMUST00000170076 897 ntAPPRIS P1 BASIC4.38□□□□□ -1.71
Smc1aQ9CU62 Gm25598-201ENSMUST00000179031 107 ntBASIC4.38□□□□□ -1.71
Smc1aQ9CU62 Scgb2a2-201ENSMUST00000179814 1107 ntAPPRIS P1 TSL 5 BASIC4.38□□□□□ -1.71
Smc1aQ9CU62 Ms4a2-205ENSMUST00000189641 647 ntTSL 3 BASIC4.38□□□□□ -1.71
Smc1aQ9CU62 Gm38061-201ENSMUST00000192490 365 ntBASIC4.38□□□□□ -1.71
Smc1aQ9CU62 Gm43316-201ENSMUST00000197252 1295 ntBASIC4.38□□□□□ -1.71
Smc1aQ9CU62 Igkv13-57-1-201ENSMUST00000198063 305 ntBASIC4.38□□□□□ -1.71
Smc1aQ9CU62 Gm43424-201ENSMUST00000200484 253 ntBASIC4.38□□□□□ -1.71
Smc1aQ9CU62 Gm8132-201ENSMUST00000204938 640 ntBASIC4.38□□□□□ -1.71
Smc1aQ9CU62 Gm5917-201ENSMUST00000217638 721 ntBASIC4.38□□□□□ -1.71
Smc1aQ9CU62 AC122924.1-201ENSMUST00000222044 163 ntBASIC4.38□□□□□ -1.71
Smc1aQ9CU62 Gm7099-201ENSMUST00000080066 554 ntBASIC4.38□□□□□ -1.71
Smc1aQ9CU62 n-R5s54-201ENSMUST00000083837 112 ntBASIC4.38□□□□□ -1.71
Smc1aQ9CU62 n-R5s151-201ENSMUST00000083959 119 ntBASIC4.38□□□□□ -1.71
Smc1aQ9CU62 Olfr577-202ENSMUST00000214080 3282 ntAPPRIS P1 TSL 5 BASIC4.38□□□□□ -1.71
Smc1aQ9CU62 Olfr1242-203ENSMUST00000143935 2406 ntAPPRIS P1 TSL 5 BASIC4.38□□□□□ -1.71
Smc1aQ9CU62 Olfr107-203ENSMUST00000215947 3954 ntAPPRIS P1 TSL 5 BASIC4.38□□□□□ -1.71
Smc1aQ9CU62 Gm37792-201ENSMUST00000195761 3413 ntBASIC4.38□□□□□ -1.71
Smc1aQ9CU62 Olfr1274-ps-202ENSMUST00000216111 3395 ntAPPRIS P1 TSL 5 BASIC4.37□□□□□ -1.71
Smc1aQ9CU62 Btbd35f3-201ENSMUST00000140300 1943 ntAPPRIS P1 BASIC4.37□□□□□ -1.71
Smc1aQ9CU62 Gm25833-201ENSMUST00000104137 133 ntBASIC4.37□□□□□ -1.71
Smc1aQ9CU62 Rps15a-ps7-201ENSMUST00000117430 392 ntBASIC4.37□□□□□ -1.71
Smc1aQ9CU62 Gm15382-201ENSMUST00000118011 537 ntBASIC4.37□□□□□ -1.71
Smc1aQ9CU62 Gm10230-201ENSMUST00000119362 867 ntAPPRIS P1 TSL 1 (best) BASIC4.37□□□□□ -1.71
Smc1aQ9CU62 Gm6071-201ENSMUST00000119561 440 ntBASIC4.37□□□□□ -1.71
Smc1aQ9CU62 Gm12358-201ENSMUST00000121842 520 ntBASIC4.37□□□□□ -1.71
Smc1aQ9CU62 Gm2012-201ENSMUST00000121900 1131 ntAPPRIS P1 TSL 5 BASIC4.37□□□□□ -1.71
Smc1aQ9CU62 Gm14473-201ENSMUST00000122269 557 ntBASIC4.37□□□□□ -1.71
Smc1aQ9CU62 4930412F09Rik-201ENSMUST00000139006 1017 ntTSL 1 (best) BASIC4.37□□□□□ -1.71
Smc1aQ9CU62 4930522O17Rik-201ENSMUST00000155178 447 ntTSL 1 (best) BASIC4.37□□□□□ -1.71
Smc1aQ9CU62 Gm22792-201ENSMUST00000157225 133 ntBASIC4.37□□□□□ -1.71
Smc1aQ9CU62 Gm14819-202ENSMUST00000169396 639 ntAPPRIS P1 TSL 5 BASIC4.37□□□□□ -1.71
Smc1aQ9CU62 Gm10487-201ENSMUST00000177566 639 ntAPPRIS P1 TSL 5 BASIC4.37□□□□□ -1.71
Smc1aQ9CU62 Gm14632-202ENSMUST00000177917 639 ntAPPRIS P1 TSL 5 BASIC4.37□□□□□ -1.71
Smc1aQ9CU62 Gm10058-202ENSMUST00000178152 639 ntAPPRIS P1 TSL 5 BASIC4.37□□□□□ -1.71
Smc1aQ9CU62 Gm10096-201ENSMUST00000178672 639 ntAPPRIS P1 TSL 5 BASIC4.37□□□□□ -1.71
Smc1aQ9CU62 Gm10230-202ENSMUST00000178745 639 ntAPPRIS P1 TSL 5 BASIC4.37□□□□□ -1.71
Smc1aQ9CU62 Gm2092-201ENSMUST00000178887 639 ntBASIC4.37□□□□□ -1.71
Smc1aQ9CU62 Gm10147-202ENSMUST00000178966 639 ntAPPRIS P1 TSL 5 BASIC4.37□□□□□ -1.71
Smc1aQ9CU62 Gm2759-201ENSMUST00000179938 639 ntBASIC4.37□□□□□ -1.71
Smc1aQ9CU62 9330185C12Rik-201ENSMUST00000180837 1009 ntTSL 1 (best) BASIC4.37□□□□□ -1.71
Smc1aQ9CU62 Gm27190-201ENSMUST00000184890 542 ntBASIC4.37□□□□□ -1.71
Smc1aQ9CU62 Gm29044-202ENSMUST00000188980 300 ntTSL 5 BASIC4.37□□□□□ -1.71
Smc1aQ9CU62 1700029E06Rik-201ENSMUST00000189036 757 ntTSL 1 (best) BASIC4.37□□□□□ -1.71
Smc1aQ9CU62 Gm29329-201ENSMUST00000189053 621 ntTSL 5 BASIC4.37□□□□□ -1.71
Smc1aQ9CU62 Gm28331-201ENSMUST00000191102 621 ntTSL 5 BASIC4.37□□□□□ -1.71
Smc1aQ9CU62 Gm37111-201ENSMUST00000193250 634 ntBASIC4.37□□□□□ -1.71
Smc1aQ9CU62 Bc1-ps1-201ENSMUST00000208471 318 ntBASIC4.37□□□□□ -1.71
Smc1aQ9CU62 AC161520.1-201ENSMUST00000210954 939 ntBASIC4.37□□□□□ -1.71
Smc1aQ9CU62 Gm34113-201ENSMUST00000213796 388 ntTSL 2 BASIC4.37□□□□□ -1.71
Smc1aQ9CU62 Olfr907-202ENSMUST00000214003 1235 ntAPPRIS P1 TSL 3 BASIC4.37□□□□□ -1.71
Smc1aQ9CU62 Gm17820-201ENSMUST00000220213 1068 ntBASIC4.37□□□□□ -1.71
Smc1aQ9CU62 AC133498.1-203ENSMUST00000221213 668 ntTSL 3 BASIC4.37□□□□□ -1.71
Smc1aQ9CU62 CT009754.1-201ENSMUST00000223489 558 ntTSL 3 BASIC4.37□□□□□ -1.71
Retrieved 100 of 76,532 protein–RNA pairs in 84.2 ms