Protein–RNA interactions for Protein: Q99PF4

Cdh23, Cadherin-23, mousemouse

Predictions only

Length 3,354 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdh23Q99PF4 4930597A21Rik-201ENSMUST00000128652 698 ntTSL 1 (best) BASIC3.25□□□□□ -1.89
Cdh23Q99PF4 Gm13976-201ENSMUST00000154367 479 ntTSL 3 BASIC3.25□□□□□ -1.89
Cdh23Q99PF4 Esd-208ENSMUST00000177137 853 ntTSL 5 BASIC3.25□□□□□ -1.89
Cdh23Q99PF4 Gm20651-201ENSMUST00000177219 329 ntBASIC3.25□□□□□ -1.89
Cdh23Q99PF4 Clock-204ENSMUST00000202122 5508 ntAPPRIS ALT2 TSL 1 (best) BASIC3.25□□□□□ -1.89
Cdh23Q99PF4 Gm5176-202ENSMUST00000220267 583 ntBASIC3.25□□□□□ -1.89
Cdh23Q99PF4 Fam169a-202ENSMUST00000169863 6013 ntAPPRIS P1 TSL 1 (best) BASIC3.25□□□□□ -1.89
Cdh23Q99PF4 Gm45104-201ENSMUST00000208748 4350 ntBASIC3.25□□□□□ -1.89
Cdh23Q99PF4 C130073E24Rik-202ENSMUST00000211313 14112 ntTSL 5 BASIC3.25□□□□□ -1.89
Cdh23Q99PF4 Gm14987-201ENSMUST00000117820 676 ntBASIC3.25□□□□□ -1.89
Cdh23Q99PF4 2210414B05Rik-201ENSMUST00000139600 872 ntTSL 1 (best) BASIC3.25□□□□□ -1.89
Cdh23Q99PF4 Gm3123-201ENSMUST00000163480 480 ntBASIC3.25□□□□□ -1.89
Cdh23Q99PF4 Gm3370-201ENSMUST00000171785 500 ntBASIC3.25□□□□□ -1.89
Cdh23Q99PF4 Gm44844-201ENSMUST00000207242 336 ntBASIC3.25□□□□□ -1.89
Cdh23Q99PF4 Mup5-201ENSMUST00000082287 925 ntAPPRIS P1 TSL 1 (best) BASIC3.25□□□□□ -1.89
Cdh23Q99PF4 Gm37970-201ENSMUST00000193865 1732 ntBASIC3.25□□□□□ -1.89
Cdh23Q99PF4 Olfr532-203ENSMUST00000213801 4232 ntAPPRIS P1 TSL 5 BASIC3.25□□□□□ -1.89
Cdh23Q99PF4 Vmn1r89-203ENSMUST00000227176 4189 ntAPPRIS P2 BASIC3.25□□□□□ -1.89
Cdh23Q99PF4 Rps24-202ENSMUST00000169826 519 ntAPPRIS ALT1 TSL 1 (best) BASIC3.25□□□□□ -1.89
Cdh23Q99PF4 1700027I24Rik-201ENSMUST00000183612 696 ntTSL 1 (best) BASIC3.25□□□□□ -1.89
Cdh23Q99PF4 Ighv8-1-201ENSMUST00000194897 291 ntBASIC3.25□□□□□ -1.89
Cdh23Q99PF4 Gm6064-201ENSMUST00000203999 454 ntBASIC3.25□□□□□ -1.89
Cdh23Q99PF4 AC134333.1-201ENSMUST00000204536 944 ntBASIC3.25□□□□□ -1.89
Cdh23Q99PF4 AC120555.1-201ENSMUST00000221020 222 ntTSL 5 BASIC3.25□□□□□ -1.89
Cdh23Q99PF4 Prl6a1-202ENSMUST00000091680 868 ntAPPRIS P2 TSL 1 (best) BASIC3.25□□□□□ -1.89
Cdh23Q99PF4 Olfr355-202ENSMUST00000213574 3610 ntAPPRIS P1 TSL 5 BASIC3.24□□□□□ -1.89
Cdh23Q99PF4 Vmn1r218-202ENSMUST00000226692 10430 ntAPPRIS P2 BASIC3.24□□□□□ -1.89
Cdh23Q99PF4 Gm45039-201ENSMUST00000209181 3477 ntBASIC3.24□□□□□ -1.89
Cdh23Q99PF4 Vmn1r219-204ENSMUST00000228113 5639 ntAPPRIS P1 BASIC3.24□□□□□ -1.89
Cdh23Q99PF4 Ms4a2-205ENSMUST00000189641 647 ntTSL 3 BASIC3.24□□□□□ -1.89
Cdh23Q99PF4 Olfr206-202ENSMUST00000207927 1122 ntAPPRIS P1 TSL 5 BASIC3.24□□□□□ -1.89
Cdh23Q99PF4 Olfr1500-204ENSMUST00000215760 2305 ntAPPRIS P1 TSL 5 BASIC3.24□□□□□ -1.89
Cdh23Q99PF4 AY358078-201ENSMUST00000053821 1461 ntAPPRIS P1 TSL 1 (best) BASIC3.24□□□□□ -1.89
Cdh23Q99PF4 Ino80d-201ENSMUST00000097718 13675 ntTSL 5 BASIC3.24□□□□□ -1.89
Cdh23Q99PF4 4933434E20Rik-201ENSMUST00000029551 3097 ntTSL 1 (best) BASIC3.24□□□□□ -1.89
Cdh23Q99PF4 AC158921.1-201ENSMUST00000227861 3468 ntBASIC3.24□□□□□ -1.89
Cdh23Q99PF4 Olfr633-202ENSMUST00000216006 3915 ntAPPRIS P1 TSL 5 BASIC3.24□□□□□ -1.89
Cdh23Q99PF4 E330013P04Rik-201ENSMUST00000065383 2070 ntTSL 1 (best) BASIC3.24□□□□□ -1.89
Cdh23Q99PF4 Prl8a6-203ENSMUST00000110355 843 ntAPPRIS ALT2 TSL 1 (best) BASIC3.24□□□□□ -1.89
Cdh23Q99PF4 Gm15733-201ENSMUST00000132957 242 ntBASIC3.24□□□□□ -1.89
Cdh23Q99PF4 Gm39232-201ENSMUST00000210760 1012 ntTSL 5 BASIC3.24□□□□□ -1.89
Cdh23Q99PF4 Prl8a6-202ENSMUST00000080762 1020 ntAPPRIS ALT2 TSL 1 (best) BASIC3.24□□□□□ -1.89
Cdh23Q99PF4 Igf1-202ENSMUST00000095360 7052 ntAPPRIS P1 TSL 1 (best) BASIC3.24□□□□□ -1.89
Cdh23Q99PF4 Zfp97-201ENSMUST00000147630 2684 ntAPPRIS P1 TSL 2 BASIC3.24□□□□□ -1.89
Cdh23Q99PF4 Olfr1016-202ENSMUST00000216425 2698 ntAPPRIS P1 TSL 3 BASIC3.24□□□□□ -1.89
Cdh23Q99PF4 Gm20139-202ENSMUST00000216041 3888 ntTSL 1 (best) BASIC3.23□□□□□ -1.89
Cdh23Q99PF4 Traj44-201ENSMUST00000103698 61 ntAPPRIS P1 BASIC3.23□□□□□ -1.89
Cdh23Q99PF4 Gm15786-201ENSMUST00000121079 450 ntBASIC3.23□□□□□ -1.89
Cdh23Q99PF4 Gm28574-201ENSMUST00000185757 699 ntBASIC3.23□□□□□ -1.89
Cdh23Q99PF4 Gm28596-201ENSMUST00000185870 696 ntBASIC3.23□□□□□ -1.89
Cdh23Q99PF4 1600010M07Rik-201ENSMUST00000185931 1204 ntTSL 1 (best) BASIC3.23□□□□□ -1.89
Cdh23Q99PF4 Gm28397-201ENSMUST00000187970 699 ntBASIC3.23□□□□□ -1.89
Cdh23Q99PF4 Gm29525-201ENSMUST00000189844 699 ntBASIC3.23□□□□□ -1.89
Cdh23Q99PF4 Gm29523-201ENSMUST00000191415 699 ntBASIC3.23□□□□□ -1.89
Cdh23Q99PF4 Gm32295-201ENSMUST00000192558 696 ntBASIC3.23□□□□□ -1.89
Cdh23Q99PF4 Gm31260-201ENSMUST00000193478 696 ntBASIC3.23□□□□□ -1.89
Cdh23Q99PF4 Ighv1-40-201ENSMUST00000194231 345 ntBASIC3.23□□□□□ -1.89
Cdh23Q99PF4 AC069074.2-201ENSMUST00000217819 428 ntBASIC3.23□□□□□ -1.89
Cdh23Q99PF4 AC134537.3-201ENSMUST00000220154 503 ntTSL 3 BASIC3.23□□□□□ -1.89
Cdh23Q99PF4 Tfpi-203ENSMUST00000111711 3968 ntTSL 5 BASIC3.23□□□□□ -1.89
Cdh23Q99PF4 Olfr1402-202ENSMUST00000199297 4051 ntAPPRIS P1 TSL 5 BASIC3.23□□□□□ -1.89
Cdh23Q99PF4 Olfr1323-202ENSMUST00000213463 3717 ntAPPRIS P1 TSL 5 BASIC3.23□□□□□ -1.89
Cdh23Q99PF4 Gm37887-201ENSMUST00000192752 2716 ntBASIC3.23□□□□□ -1.89
Cdh23Q99PF4 Gm45176-201ENSMUST00000207696 4096 ntBASIC3.23□□□□□ -1.89
Cdh23Q99PF4 Gm38248-201ENSMUST00000193744 5783 ntBASIC3.23□□□□□ -1.89
Cdh23Q99PF4 Gm28064-201ENSMUST00000185639 858 ntBASIC3.23□□□□□ -1.89
Cdh23Q99PF4 Amd-ps5-201ENSMUST00000198406 989 ntBASIC3.23□□□□□ -1.89
Cdh23Q99PF4 Gm44012-201ENSMUST00000204154 424 ntTSL 3 BASIC3.23□□□□□ -1.89
Cdh23Q99PF4 AC168062.3-201ENSMUST00000227025 165 ntBASIC3.23□□□□□ -1.89
Cdh23Q99PF4 Olfr235-203ENSMUST00000214551 2240 ntAPPRIS P1 TSL 5 BASIC3.23□□□□□ -1.89
Cdh23Q99PF4 Gm32693-201ENSMUST00000196538 2402 ntTSL 1 (best) BASIC3.23□□□□□ -1.89
Cdh23Q99PF4 Gm42547-201ENSMUST00000201159 3798 ntBASIC3.23□□□□□ -1.89
Cdh23Q99PF4 Vmn2r81-201ENSMUST00000020547 3276 ntAPPRIS P1 TSL 1 (best) BASIC3.23□□□□□ -1.89
Cdh23Q99PF4 Gm29093-201ENSMUST00000187366 409 ntTSL 5 BASIC3.23□□□□□ -1.89
Cdh23Q99PF4 Gm20162-201ENSMUST00000193629 871 ntBASIC3.23□□□□□ -1.89
Cdh23Q99PF4 Gm29666-201ENSMUST00000189185 8038 ntAPPRIS P1 TSL 5 BASIC3.22□□□□□ -1.89
Cdh23Q99PF4 Vmn1r200-204ENSMUST00000227326 5449 ntAPPRIS ALT2 BASIC3.22□□□□□ -1.89
Cdh23Q99PF4 Ralgapa1-211ENSMUST00000220367 7473 ntAPPRIS ALT2 TSL 5 BASIC3.22□□□□□ -1.89
Cdh23Q99PF4 Spef2-206ENSMUST00000208854 7038 ntAPPRIS ALT2 TSL 5 BASIC3.22□□□□□ -1.89
Cdh23Q99PF4 Rpl30-206ENSMUST00000142643 505 ntTSL 2 BASIC3.22□□□□□ -1.89
Cdh23Q99PF4 Pid1-206ENSMUST00000176822 1119 ntTSL 2 BASIC3.22□□□□□ -1.89
Cdh23Q99PF4 Mrgprb1-203ENSMUST00000188918 435 ntTSL 3 BASIC3.22□□□□□ -1.89
Cdh23Q99PF4 Calml4-204ENSMUST00000214633 394 ntTSL 3 BASIC3.22□□□□□ -1.89
Cdh23Q99PF4 Prl8a1-201ENSMUST00000006664 864 ntAPPRIS P1 TSL 1 (best) BASIC3.22□□□□□ -1.89
Cdh23Q99PF4 Olfr192-201ENSMUST00000080251 925 ntBASIC3.22□□□□□ -1.89
Cdh23Q99PF4 Fat1-206ENSMUST00000215588 13938 ntTSL 5 BASIC3.22□□□□□ -1.89
Cdh23Q99PF4 Cd200r3-208ENSMUST00000164007 1484 ntAPPRIS ALT2 TSL 1 (best) BASIC3.22□□□□□ -1.89
Cdh23Q99PF4 Gm16158-201ENSMUST00000123509 785 ntTSL 5 BASIC3.22□□□□□ -1.89
Cdh23Q99PF4 Gm17191-201ENSMUST00000165200 417 ntTSL 1 (best) BASIC3.22□□□□□ -1.89
Cdh23Q99PF4 Vmn1r225-201ENSMUST00000061660 897 ntAPPRIS P1 BASIC3.22□□□□□ -1.89
Cdh23Q99PF4 Olfr943-201ENSMUST00000071617 1079 ntAPPRIS P2 TSL 3 BASIC3.22□□□□□ -1.89
Cdh23Q99PF4 Olfr1136-201ENSMUST00000077471 1067 ntAPPRIS P1 BASIC3.22□□□□□ -1.89
Cdh23Q99PF4 Mannr-201ENSMUST00000193549 1438 ntTSL 1 (best) BASIC3.22□□□□□ -1.89
Cdh23Q99PF4 Olfr24-203ENSMUST00000216754 4327 ntAPPRIS P1 TSL 2 BASIC3.22□□□□□ -1.89
Cdh23Q99PF4 Gm37674-201ENSMUST00000194177 1834 ntBASIC3.22□□□□□ -1.89
Cdh23Q99PF4 Gm6367-201ENSMUST00000178646 2464 ntAPPRIS P1 TSL 5 BASIC3.22□□□□□ -1.89
Cdh23Q99PF4 Gabrg2-201ENSMUST00000070725 4041 ntAPPRIS ALT1 TSL 1 (best) BASIC3.22□□□□□ -1.89
Cdh23Q99PF4 Gm25529-201ENSMUST00000104850 92 ntBASIC3.21□□□□□ -1.89
Cdh23Q99PF4 Gm12578-201ENSMUST00000121244 417 ntBASIC3.21□□□□□ -1.89
Cdh23Q99PF4 Gm8244-201ENSMUST00000121254 264 ntBASIC3.21□□□□□ -1.89
Retrieved 100 of 76,532 protein–RNA pairs in 81.7 ms