Protein–RNA interactions for Protein: Q99LC2

Cstf1, Cleavage stimulation factor subunit 1, mousemouse

Known RBP Predictions only

Length 431 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cstf1Q99LC2 Cfh-203ENSMUST00000111977 4100 ntAPPRIS ALT2 TSL 1 (best) BASIC3.9□□□□□ -1.78
Cstf1Q99LC2 Txndc9-204ENSMUST00000193832 3472 ntTSL 2 BASIC3.9□□□□□ -1.79
Cstf1Q99LC2 Apool-202ENSMUST00000113415 783 ntAPPRIS ALT2 TSL 5 BASIC3.9□□□□□ -1.79
Cstf1Q99LC2 Gm5938-201ENSMUST00000114030 775 ntAPPRIS P1 TSL 1 (best) BASIC3.9□□□□□ -1.79
Cstf1Q99LC2 Gm11432-201ENSMUST00000117334 231 ntBASIC3.9□□□□□ -1.79
Cstf1Q99LC2 Gm11404-201ENSMUST00000120872 494 ntBASIC3.9□□□□□ -1.79
Cstf1Q99LC2 Gm14875-201ENSMUST00000120881 319 ntBASIC3.9□□□□□ -1.79
Cstf1Q99LC2 Gm6565-201ENSMUST00000121217 438 ntBASIC3.9□□□□□ -1.79
Cstf1Q99LC2 Scgb2b22-ps-201ENSMUST00000121947 340 ntBASIC3.9□□□□□ -1.79
Cstf1Q99LC2 Gm12095-201ENSMUST00000121962 816 ntBASIC3.9□□□□□ -1.79
Cstf1Q99LC2 Gm22718-201ENSMUST00000122701 315 ntBASIC3.9□□□□□ -1.79
Cstf1Q99LC2 Gm11216-201ENSMUST00000125240 354 ntTSL 5 BASIC3.9□□□□□ -1.79
Cstf1Q99LC2 Gm13943-201ENSMUST00000144043 343 ntTSL 5 BASIC3.9□□□□□ -1.79
Cstf1Q99LC2 Ccdc152-201ENSMUST00000165386 798 ntAPPRIS P1 TSL 5 BASIC3.9□□□□□ -1.79
Cstf1Q99LC2 Gm26746-201ENSMUST00000181722 487 ntBASIC3.9□□□□□ -1.79
Cstf1Q99LC2 Gm7634-201ENSMUST00000185778 553 ntBASIC3.9□□□□□ -1.79
Cstf1Q99LC2 Gm28191-201ENSMUST00000189112 211 ntBASIC3.9□□□□□ -1.79
Cstf1Q99LC2 1700121L16Rik-201ENSMUST00000189166 561 ntTSL 1 (best) BASIC3.9□□□□□ -1.79
Cstf1Q99LC2 Gm28724-202ENSMUST00000194218 295 ntBASIC3.9□□□□□ -1.79
Cstf1Q99LC2 2210017I01Rik-201ENSMUST00000195278 822 ntAPPRIS P1 TSL 1 (best) BASIC3.9□□□□□ -1.79
Cstf1Q99LC2 Gm44665-201ENSMUST00000205381 251 ntBASIC3.9□□□□□ -1.79
Cstf1Q99LC2 Gm45034-201ENSMUST00000206831 482 ntBASIC3.9□□□□□ -1.79
Cstf1Q99LC2 2500002B13Rik-202ENSMUST00000210752 298 ntTSL 1 (best) BASIC3.9□□□□□ -1.79
Cstf1Q99LC2 CT010511.1-201ENSMUST00000224570 315 ntBASIC3.9□□□□□ -1.79
Cstf1Q99LC2 AC126690.1-201ENSMUST00000228898 397 ntBASIC3.9□□□□□ -1.79
Cstf1Q99LC2 Cdrt4-201ENSMUST00000035854 723 ntAPPRIS P1 TSL 1 (best) BASIC3.9□□□□□ -1.79
Cstf1Q99LC2 Olfr506-201ENSMUST00000077343 1008 ntAPPRIS P1 BASIC3.9□□□□□ -1.79
Cstf1Q99LC2 Gm6361-201ENSMUST00000091031 435 ntBASIC3.9□□□□□ -1.79
Cstf1Q99LC2 Tas2r140-201ENSMUST00000095391 1000 ntAPPRIS P1 BASIC3.9□□□□□ -1.79
Cstf1Q99LC2 Ube2v2-201ENSMUST00000096234 609 ntTSL 3 BASIC3.9□□□□□ -1.79
Cstf1Q99LC2 Gm10553-201ENSMUST00000097669 372 ntAPPRIS P1 BASIC3.9□□□□□ -1.79
Cstf1Q99LC2 Olfr661-201ENSMUST00000098168 964 ntAPPRIS P1 BASIC3.9□□□□□ -1.79
Cstf1Q99LC2 Olfr706-202ENSMUST00000213918 4828 ntAPPRIS P1 TSL 5 BASIC3.9□□□□□ -1.79
Cstf1Q99LC2 Gm42447-201ENSMUST00000200102 2903 ntBASIC3.9□□□□□ -1.79
Cstf1Q99LC2 Vmn2r27-201ENSMUST00000100968 2574 ntAPPRIS P1 TSL 5 BASIC3.9□□□□□ -1.79
Cstf1Q99LC2 4932415D10Rik-202ENSMUST00000217661 15111 ntAPPRIS P1 TSL 5 BASIC3.89□□□□□ -1.79
Cstf1Q99LC2 Foxp2-203ENSMUST00000115470 2692 ntTSL 1 (best) BASIC3.89□□□□□ -1.79
Cstf1Q99LC2 Nlrp2-201ENSMUST00000045022 3404 ntAPPRIS P1 TSL 1 (best) BASIC3.89□□□□□ -1.79
Cstf1Q99LC2 Olfr733-203ENSMUST00000214756 3640 ntAPPRIS P1 TSL 5 BASIC3.89□□□□□ -1.79
Cstf1Q99LC2 Igkv7-33-201ENSMUST00000103376 362 ntAPPRIS ALT2 BASIC3.89□□□□□ -1.79
Cstf1Q99LC2 Ighv1-4-201ENSMUST00000103493 351 ntAPPRIS P1 BASIC3.89□□□□□ -1.79
Cstf1Q99LC2 Gm22472-201ENSMUST00000104115 134 ntBASIC3.89□□□□□ -1.79
Cstf1Q99LC2 Gm15926-201ENSMUST00000120492 550 ntBASIC3.89□□□□□ -1.79
Cstf1Q99LC2 Gm13852-201ENSMUST00000122350 242 ntBASIC3.89□□□□□ -1.79
Cstf1Q99LC2 Gm13483-201ENSMUST00000123699 664 ntTSL 1 (best) BASIC3.89□□□□□ -1.79
Cstf1Q99LC2 Gm15344-201ENSMUST00000152600 421 ntTSL 3 BASIC3.89□□□□□ -1.79
Cstf1Q99LC2 Gm25835-201ENSMUST00000158917 144 ntBASIC3.89□□□□□ -1.79
Cstf1Q99LC2 Vmn1r-ps48-201ENSMUST00000176352 886 ntBASIC3.89□□□□□ -1.79
Cstf1Q99LC2 Ap3m1-ps-201ENSMUST00000177652 1258 ntBASIC3.89□□□□□ -1.79
Cstf1Q99LC2 Gm38279-201ENSMUST00000194067 1131 ntBASIC3.89□□□□□ -1.79
Cstf1Q99LC2 Gm42470-201ENSMUST00000198086 251 ntTSL 3 BASIC3.89□□□□□ -1.79
Cstf1Q99LC2 Gm4859-201ENSMUST00000199625 787 ntBASIC3.89□□□□□ -1.79
Cstf1Q99LC2 Gm31693-201ENSMUST00000200150 909 ntTSL 1 (best) BASIC3.89□□□□□ -1.79
Cstf1Q99LC2 Gm44355-201ENSMUST00000200417 104 ntBASIC3.89□□□□□ -1.79
Cstf1Q99LC2 Olfr436-ps1-201ENSMUST00000203108 284 ntBASIC3.89□□□□□ -1.79
Cstf1Q99LC2 Gm15927-204ENSMUST00000206075 372 ntTSL 3 BASIC3.89□□□□□ -1.79
Cstf1Q99LC2 Gm45080-201ENSMUST00000206648 283 ntBASIC3.89□□□□□ -1.79
Cstf1Q99LC2 Olfr673-ps1-201ENSMUST00000210859 411 ntBASIC3.89□□□□□ -1.79
Cstf1Q99LC2 1700026F02Rik-205ENSMUST00000212266 787 ntTSL 5 BASIC3.89□□□□□ -1.79
Cstf1Q99LC2 Gm29884-201ENSMUST00000218403 453 ntBASIC3.89□□□□□ -1.79
Cstf1Q99LC2 AC154635.1-201ENSMUST00000221433 400 ntTSL 3 BASIC3.89□□□□□ -1.79
Cstf1Q99LC2 AC192088.2-201ENSMUST00000227590 411 ntBASIC3.89□□□□□ -1.79
Cstf1Q99LC2 Olfr154-201ENSMUST00000099918 1079 ntAPPRIS P1 BASIC3.89□□□□□ -1.79
Cstf1Q99LC2 Aspn-202ENSMUST00000177948 2329 ntAPPRIS P1 TSL 1 (best) BASIC3.89□□□□□ -1.79
Cstf1Q99LC2 Pde1a-205ENSMUST00000102654 4122 ntAPPRIS P1 TSL 5 BASIC3.89□□□□□ -1.79
Cstf1Q99LC2 Gm3089-201ENSMUST00000200804 1395 ntBASIC3.89□□□□□ -1.79
Cstf1Q99LC2 Gm3302-201ENSMUST00000201462 1395 ntBASIC3.89□□□□□ -1.79
Cstf1Q99LC2 Gm5127-202ENSMUST00000101297 1809 ntAPPRIS P1 TSL 1 (best) BASIC3.88□□□□□ -1.79
Cstf1Q99LC2 Iigp1-201ENSMUST00000032473 3121 ntAPPRIS P1 TSL 3 BASIC3.88□□□□□ -1.79
Cstf1Q99LC2 Nbeal1-203ENSMUST00000160834 15731 ntAPPRIS P1 TSL 5 BASIC3.88□□□□□ -1.79
Cstf1Q99LC2 P2ry14-205ENSMUST00000197220 1684 ntAPPRIS P1 TSL 1 (best) BASIC3.88□□□□□ -1.79
Cstf1Q99LC2 Vmn2r35-201ENSMUST00000169683 2586 ntAPPRIS P1 TSL 5 BASIC3.88□□□□□ -1.79
Cstf1Q99LC2 Elavl4-202ENSMUST00000102723 4024 ntTSL 1 (best) BASIC3.88□□□□□ -1.79
Cstf1Q99LC2 Gm25647-201ENSMUST00000101832 78 ntBASIC3.88□□□□□ -1.79
Cstf1Q99LC2 Gm25823-201ENSMUST00000101995 78 ntBASIC3.88□□□□□ -1.79
Cstf1Q99LC2 Gm23322-201ENSMUST00000104464 167 ntBASIC3.88□□□□□ -1.79
Cstf1Q99LC2 Gm17106-201ENSMUST00000105610 459 ntTSL 5 BASIC3.88□□□□□ -1.79
Cstf1Q99LC2 Gm14050-201ENSMUST00000117052 346 ntBASIC3.88□□□□□ -1.79
Cstf1Q99LC2 Gm15021-201ENSMUST00000117832 742 ntBASIC3.88□□□□□ -1.79
Cstf1Q99LC2 Gm8757-201ENSMUST00000119660 372 ntBASIC3.88□□□□□ -1.79
Cstf1Q99LC2 Gm5384-201ENSMUST00000120313 463 ntBASIC3.88□□□□□ -1.79
Cstf1Q99LC2 Gm14926-201ENSMUST00000120650 508 ntBASIC3.88□□□□□ -1.79
Cstf1Q99LC2 Platr32-201ENSMUST00000148597 394 ntTSL 5 BASIC3.88□□□□□ -1.79
Cstf1Q99LC2 Rgs2-204ENSMUST00000153527 588 ntTSL 2 BASIC3.88□□□□□ -1.79
Cstf1Q99LC2 Gm25971-201ENSMUST00000158953 286 ntBASIC3.88□□□□□ -1.79
Cstf1Q99LC2 Olfr325-201ENSMUST00000169428 1065 ntAPPRIS P1 BASIC3.88□□□□□ -1.79
Cstf1Q99LC2 Gm24220-201ENSMUST00000177753 79 ntBASIC3.88□□□□□ -1.79
Cstf1Q99LC2 Gm25988-201ENSMUST00000177759 79 ntBASIC3.88□□□□□ -1.79
Cstf1Q99LC2 Gm23471-201ENSMUST00000177886 79 ntBASIC3.88□□□□□ -1.79
Cstf1Q99LC2 Gm26488-201ENSMUST00000178225 79 ntBASIC3.88□□□□□ -1.79
Cstf1Q99LC2 Gm23449-201ENSMUST00000179208 79 ntBASIC3.88□□□□□ -1.79
Cstf1Q99LC2 Gm25221-201ENSMUST00000180051 79 ntBASIC3.88□□□□□ -1.79
Cstf1Q99LC2 Gm28591-201ENSMUST00000185259 183 ntBASIC3.88□□□□□ -1.79
Cstf1Q99LC2 Gm29598-201ENSMUST00000188996 588 ntBASIC3.88□□□□□ -1.79
Cstf1Q99LC2 4930420N18Rik-201ENSMUST00000191831 676 ntBASIC3.88□□□□□ -1.79
Cstf1Q99LC2 Ighv8-1-201ENSMUST00000194897 291 ntBASIC3.88□□□□□ -1.79
Cstf1Q99LC2 Gm17937-201ENSMUST00000197908 742 ntBASIC3.88□□□□□ -1.79
Cstf1Q99LC2 Gm43345-201ENSMUST00000199484 269 ntBASIC3.88□□□□□ -1.79
Cstf1Q99LC2 Olfr1479-ps1-201ENSMUST00000207752 382 ntBASIC3.88□□□□□ -1.79
Cstf1Q99LC2 Gm7407-201ENSMUST00000208301 568 ntBASIC3.88□□□□□ -1.79
Retrieved 100 of 76,532 protein–RNA pairs in 73.6 ms