Protein–RNA interactions for Protein: Q8R2Q0

Trim29, Tripartite motif-containing protein 29, mousemouse

Predictions only

Length 587 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim29Q8R2Q0 Gm44689-201ENSMUST00000208786 1372 ntTSL 5 BASIC4.46□□□□□ -1.7
Trim29Q8R2Q0 Inpp4b-201ENSMUST00000042529 4120 ntAPPRIS P3 TSL 1 (best) BASIC4.46□□□□□ -1.7
Trim29Q8R2Q0 Gm4736-201ENSMUST00000100870 380 ntBASIC4.46□□□□□ -1.7
Trim29Q8R2Q0 Mir551b-201ENSMUST00000102165 98 ntBASIC4.46□□□□□ -1.7
Trim29Q8R2Q0 Gm25097-201ENSMUST00000104042 145 ntBASIC4.46□□□□□ -1.7
Trim29Q8R2Q0 Mier1-203ENSMUST00000106855 1079 ntAPPRIS ALT2 TSL 1 (best) BASIC4.46□□□□□ -1.7
Trim29Q8R2Q0 Vmn1r-ps126-201ENSMUST00000117681 926 ntBASIC4.46□□□□□ -1.7
Trim29Q8R2Q0 Klrc1-203ENSMUST00000118447 684 ntAPPRIS P3 TSL 1 (best) BASIC4.46□□□□□ -1.7
Trim29Q8R2Q0 Gm12252-201ENSMUST00000119517 219 ntBASIC4.46□□□□□ -1.7
Trim29Q8R2Q0 Gm16359-201ENSMUST00000124511 289 ntBASIC4.46□□□□□ -1.7
Trim29Q8R2Q0 Gm23205-201ENSMUST00000158671 103 ntBASIC4.46□□□□□ -1.7
Trim29Q8R2Q0 Gm3025-201ENSMUST00000163454 489 ntBASIC4.46□□□□□ -1.7
Trim29Q8R2Q0 Gm2878-201ENSMUST00000170173 486 ntBASIC4.46□□□□□ -1.7
Trim29Q8R2Q0 Gm13698-201ENSMUST00000178325 732 ntTSL 5 BASIC4.46□□□□□ -1.7
Trim29Q8R2Q0 Gm13694-202ENSMUST00000178655 732 ntTSL 5 BASIC4.46□□□□□ -1.7
Trim29Q8R2Q0 Gm13696-201ENSMUST00000179311 732 ntTSL 5 BASIC4.46□□□□□ -1.7
Trim29Q8R2Q0 Gm13693-202ENSMUST00000179448 732 ntTSL 5 BASIC4.46□□□□□ -1.7
Trim29Q8R2Q0 Gm13695-202ENSMUST00000179504 732 ntTSL 5 BASIC4.46□□□□□ -1.7
Trim29Q8R2Q0 Gm13697-202ENSMUST00000179552 732 ntTSL 5 BASIC4.46□□□□□ -1.7
Trim29Q8R2Q0 Gm27718-201ENSMUST00000183721 86 ntBASIC4.46□□□□□ -1.7
Trim29Q8R2Q0 Gm27828-201ENSMUST00000184108 119 ntBASIC4.46□□□□□ -1.7
Trim29Q8R2Q0 Trdv1-202ENSMUST00000187163 334 ntAPPRIS ALT2 BASIC4.46□□□□□ -1.7
Trim29Q8R2Q0 Gm28364-201ENSMUST00000187908 334 ntTSL 3 BASIC4.46□□□□□ -1.7
Trim29Q8R2Q0 Gm29130-201ENSMUST00000191015 618 ntTSL 5 BASIC4.46□□□□□ -1.7
Trim29Q8R2Q0 Gm38061-201ENSMUST00000192490 365 ntBASIC4.46□□□□□ -1.7
Trim29Q8R2Q0 Gm31942-201ENSMUST00000192534 827 ntTSL 5 BASIC4.46□□□□□ -1.7
Trim29Q8R2Q0 Gm43236-201ENSMUST00000197414 313 ntTSL 5 BASIC4.46□□□□□ -1.7
Trim29Q8R2Q0 Gm18861-201ENSMUST00000202509 1186 ntBASIC4.46□□□□□ -1.7
Trim29Q8R2Q0 Gm44088-201ENSMUST00000204595 237 ntBASIC4.46□□□□□ -1.7
Trim29Q8R2Q0 Gm44554-201ENSMUST00000208738 147 ntBASIC4.46□□□□□ -1.7
Trim29Q8R2Q0 Gm18704-201ENSMUST00000219736 446 ntBASIC4.46□□□□□ -1.7
Trim29Q8R2Q0 Pah-204ENSMUST00000219813 789 ntTSL 3 BASIC4.46□□□□□ -1.7
Trim29Q8R2Q0 1700011B04Rik-211ENSMUST00000222690 394 ntTSL 5 BASIC4.46□□□□□ -1.7
Trim29Q8R2Q0 AC158392.1-201ENSMUST00000223720 1069 ntBASIC4.46□□□□□ -1.7
Trim29Q8R2Q0 Tas2r117-201ENSMUST00000068302 1158 ntAPPRIS P1 BASIC4.46□□□□□ -1.7
Trim29Q8R2Q0 Gm23102-201ENSMUST00000083724 116 ntBASIC4.46□□□□□ -1.7
Trim29Q8R2Q0 Gm26165-201ENSMUST00000083791 138 ntBASIC4.46□□□□□ -1.7
Trim29Q8R2Q0 Lipo5-201ENSMUST00000156818 2003 ntAPPRIS P1 TSL 5 BASIC4.46□□□□□ -1.7
Trim29Q8R2Q0 Olfr470-203ENSMUST00000220193 3080 ntAPPRIS P1 TSL 5 BASIC4.46□□□□□ -1.7
Trim29Q8R2Q0 Dock11-202ENSMUST00000115264 1725 ntTSL 5 BASIC4.46□□□□□ -1.7
Trim29Q8R2Q0 Olfm3-201ENSMUST00000051309 3928 ntAPPRIS P4 TSL 1 (best) BASIC4.46□□□□□ -1.7
Trim29Q8R2Q0 Dnase2b-201ENSMUST00000029836 2566 ntAPPRIS P1 TSL 1 (best) BASIC4.46□□□□□ -1.7
Trim29Q8R2Q0 Gm42993-201ENSMUST00000196856 7325 ntBASIC4.45□□□□□ -1.7
Trim29Q8R2Q0 Gm13912-201ENSMUST00000156541 1860 ntTSL 1 (best) BASIC4.45□□□□□ -1.7
Trim29Q8R2Q0 Zfp638-206ENSMUST00000203324 3822 ntAPPRIS ALT2 TSL 5 BASIC4.45□□□□□ -1.7
Trim29Q8R2Q0 Cngb3-201ENSMUST00000102999 4708 ntAPPRIS P1 TSL 1 (best) BASIC4.45□□□□□ -1.7
Trim29Q8R2Q0 9430025C20Rik-201ENSMUST00000068663 2115 ntBASIC4.45□□□□□ -1.7
Trim29Q8R2Q0 Gm16794-203ENSMUST00000185324 1490 ntTSL 1 (best) BASIC4.45□□□□□ -1.7
Trim29Q8R2Q0 Dnah7b-201ENSMUST00000069293 12314 ntAPPRIS P1 TSL 5 BASIC4.45□□□□□ -1.7
Trim29Q8R2Q0 Igkv1-131-201ENSMUST00000103306 362 ntAPPRIS P1 BASIC4.45□□□□□ -1.7
Trim29Q8R2Q0 Igkv8-19-201ENSMUST00000103389 305 ntAPPRIS P1 BASIC4.45□□□□□ -1.7
Trim29Q8R2Q0 Gm15377-201ENSMUST00000119594 246 ntBASIC4.45□□□□□ -1.7
Trim29Q8R2Q0 Gm11746-201ENSMUST00000119843 821 ntBASIC4.45□□□□□ -1.7
Trim29Q8R2Q0 Gm13852-201ENSMUST00000122350 242 ntBASIC4.45□□□□□ -1.7
Trim29Q8R2Q0 Gm11534-201ENSMUST00000125956 204 ntTSL 3 BASIC4.45□□□□□ -1.7
Trim29Q8R2Q0 Gm24503-201ENSMUST00000158454 135 ntBASIC4.45□□□□□ -1.7
Trim29Q8R2Q0 Gm2862-201ENSMUST00000161524 328 ntBASIC4.45□□□□□ -1.7
Trim29Q8R2Q0 Gm5473-201ENSMUST00000179326 642 ntBASIC4.45□□□□□ -1.7
Trim29Q8R2Q0 Gm21960-201ENSMUST00000181924 452 ntBASIC4.45□□□□□ -1.7
Trim29Q8R2Q0 Gm27952-201ENSMUST00000184748 105 ntBASIC4.45□□□□□ -1.7
Trim29Q8R2Q0 Gm38098-201ENSMUST00000194115 241 ntBASIC4.45□□□□□ -1.7
Trim29Q8R2Q0 Klk1b18-ps-201ENSMUST00000205780 167 ntBASIC4.45□□□□□ -1.7
Trim29Q8R2Q0 Gm5176-202ENSMUST00000220267 583 ntBASIC4.45□□□□□ -1.7
Trim29Q8R2Q0 AC192334.1-201ENSMUST00000221832 1268 ntTSL 5 BASIC4.45□□□□□ -1.7
Trim29Q8R2Q0 AC154738.1-201ENSMUST00000227054 368 ntBASIC4.45□□□□□ -1.7
Trim29Q8R2Q0 AC140209.1-201ENSMUST00000227875 284 ntBASIC4.45□□□□□ -1.7
Trim29Q8R2Q0 AC133189.2-201ENSMUST00000228527 392 ntBASIC4.45□□□□□ -1.7
Trim29Q8R2Q0 Olfr729-201ENSMUST00000061020 972 ntAPPRIS P1 BASIC4.45□□□□□ -1.7
Trim29Q8R2Q0 Olfr787-201ENSMUST00000077836 939 ntAPPRIS P1 BASIC4.45□□□□□ -1.7
Trim29Q8R2Q0 Gm10042-201ENSMUST00000079884 78 ntBASIC4.45□□□□□ -1.7
Trim29Q8R2Q0 Mir30e-201ENSMUST00000083475 92 ntBASIC4.45□□□□□ -1.7
Trim29Q8R2Q0 Gm6757-201ENSMUST00000189810 1706 ntBASIC4.45□□□□□ -1.7
Trim29Q8R2Q0 Gm43376-202ENSMUST00000199747 1743 ntTSL 1 (best) BASIC4.45□□□□□ -1.7
Trim29Q8R2Q0 Gm14636-202ENSMUST00000150801 5060 ntTSL 1 (best) BASIC4.45□□□□□ -1.7
Trim29Q8R2Q0 Vmn1r14-202ENSMUST00000227209 6857 ntAPPRIS ALT2 BASIC4.45□□□□□ -1.7
Trim29Q8R2Q0 Olfr111-203ENSMUST00000215424 2548 ntAPPRIS P1 TSL 5 BASIC4.45□□□□□ -1.7
Trim29Q8R2Q0 BC002059-202ENSMUST00000190415 1964 ntTSL 2 BASIC4.45□□□□□ -1.7
Trim29Q8R2Q0 Rtl4-201ENSMUST00000096301 1758 ntAPPRIS P1 BASIC4.45□□□□□ -1.7
Trim29Q8R2Q0 1810006J02Rik-201ENSMUST00000186473 1687 ntTSL 1 (best) BASIC4.45□□□□□ -1.7
Trim29Q8R2Q0 Nebl-207ENSMUST00000132418 1734 ntTSL 1 (best) BASIC4.44□□□□□ -1.7
Trim29Q8R2Q0 Gm6215-201ENSMUST00000119297 1386 ntBASIC4.44□□□□□ -1.7
Trim29Q8R2Q0 Ighv1-34-201ENSMUST00000103512 388 ntAPPRIS P1 BASIC4.44□□□□□ -1.7
Trim29Q8R2Q0 Trav12d-2-201ENSMUST00000103593 341 ntAPPRIS ALT2 BASIC4.44□□□□□ -1.7
Trim29Q8R2Q0 Trav12n-2-201ENSMUST00000103619 341 ntAPPRIS ALT2 BASIC4.44□□□□□ -1.7
Trim29Q8R2Q0 Vmn1r-ps93-201ENSMUST00000117599 432 ntBASIC4.44□□□□□ -1.7
Trim29Q8R2Q0 Gm11625-201ENSMUST00000119535 296 ntBASIC4.44□□□□□ -1.7
Trim29Q8R2Q0 Gm14649-201ENSMUST00000121814 324 ntBASIC4.44□□□□□ -1.7
Trim29Q8R2Q0 Tarbp2-207ENSMUST00000142114 420 ntTSL 5 BASIC4.44□□□□□ -1.7
Trim29Q8R2Q0 Gm11418-201ENSMUST00000156193 626 ntTSL 1 (best) BASIC4.44□□□□□ -1.7
Trim29Q8R2Q0 Gm23228-201ENSMUST00000157296 270 ntBASIC4.44□□□□□ -1.7
Trim29Q8R2Q0 Gm23753-201ENSMUST00000157575 149 ntBASIC4.44□□□□□ -1.7
Trim29Q8R2Q0 Gm25224-201ENSMUST00000158195 68 ntBASIC4.44□□□□□ -1.7
Trim29Q8R2Q0 Gm16147-201ENSMUST00000162143 373 ntBASIC4.44□□□□□ -1.7
Trim29Q8R2Q0 Gm6486-201ENSMUST00000166202 434 ntBASIC4.44□□□□□ -1.7
Trim29Q8R2Q0 Gm22693-201ENSMUST00000175049 442 ntBASIC4.44□□□□□ -1.7
Trim29Q8R2Q0 Gm28619-201ENSMUST00000185889 622 ntTSL 5 BASIC4.44□□□□□ -1.7
Trim29Q8R2Q0 Gm28994-201ENSMUST00000188556 621 ntTSL 5 BASIC4.44□□□□□ -1.7
Trim29Q8R2Q0 Gm29459-201ENSMUST00000191359 518 ntTSL 1 (best) BASIC4.44□□□□□ -1.7
Trim29Q8R2Q0 Gm37231-201ENSMUST00000191716 621 ntTSL 1 (best) BASIC4.44□□□□□ -1.7
Trim29Q8R2Q0 Gm38159-202ENSMUST00000194145 621 ntTSL 5 BASIC4.44□□□□□ -1.7
Retrieved 100 of 76,532 protein–RNA pairs in 83.5 ms