Protein–RNA interactions for Protein: Q8C9S8

Atg4a, Cysteine protease ATG4A, mousemouse

Predictions only

Length 396 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Atg4aQ8C9S8 Olfm3-201ENSMUST00000051309 3928 ntAPPRIS P4 TSL 1 (best) BASIC4.51□□□□□ -1.69
Atg4aQ8C9S8 Vmn1r215-202ENSMUST00000228092 2790 ntAPPRIS P1 BASIC4.51□□□□□ -1.69
Atg4aQ8C9S8 Olfr183-204ENSMUST00000214831 1906 ntAPPRIS P1 TSL 5 BASIC4.51□□□□□ -1.69
Atg4aQ8C9S8 Gm10488-201ENSMUST00000101657 874 ntAPPRIS P1 TSL 1 (best) BASIC4.51□□□□□ -1.69
Atg4aQ8C9S8 Traj7-201ENSMUST00000103733 59 ntAPPRIS P1 BASIC4.51□□□□□ -1.69
Atg4aQ8C9S8 Gm12448-201ENSMUST00000118852 655 ntBASIC4.51□□□□□ -1.69
Atg4aQ8C9S8 Gm14253-201ENSMUST00000122112 639 ntBASIC4.51□□□□□ -1.69
Atg4aQ8C9S8 Gm23855-201ENSMUST00000158377 135 ntBASIC4.51□□□□□ -1.69
Atg4aQ8C9S8 Gm23112-201ENSMUST00000158606 125 ntBASIC4.51□□□□□ -1.69
Atg4aQ8C9S8 Vmn1r163-201ENSMUST00000164537 924 ntAPPRIS P1 BASIC4.51□□□□□ -1.69
Atg4aQ8C9S8 Vmn1r128-201ENSMUST00000169165 924 ntAPPRIS P1 BASIC4.51□□□□□ -1.69
Atg4aQ8C9S8 Vmn1r135-201ENSMUST00000170931 924 ntAPPRIS P1 BASIC4.51□□□□□ -1.69
Atg4aQ8C9S8 Mir3104-201ENSMUST00000174911 63 ntBASIC4.51□□□□□ -1.69
Atg4aQ8C9S8 Obox4-ps29-201ENSMUST00000175956 1134 ntBASIC4.51□□□□□ -1.69
Atg4aQ8C9S8 Gm8247-202ENSMUST00000178759 375 ntAPPRIS ALT2 TSL 5 BASIC4.51□□□□□ -1.69
Atg4aQ8C9S8 Gm4836-201ENSMUST00000179874 907 ntAPPRIS P1 TSL 1 (best) BASIC4.51□□□□□ -1.69
Atg4aQ8C9S8 Gm10096-202ENSMUST00000180207 907 ntAPPRIS P1 TSL 1 (best) BASIC4.51□□□□□ -1.69
Atg4aQ8C9S8 Gm10487-202ENSMUST00000180344 907 ntAPPRIS P1 TSL 1 (best) BASIC4.51□□□□□ -1.69
Atg4aQ8C9S8 4930533P14Rik-201ENSMUST00000189056 583 ntTSL 1 (best) BASIC4.51□□□□□ -1.69
Atg4aQ8C9S8 1700113H08Rik-203ENSMUST00000189775 798 ntTSL 1 (best) BASIC4.51□□□□□ -1.69
Atg4aQ8C9S8 Gm45029-201ENSMUST00000208702 391 ntTSL 5 BASIC4.51□□□□□ -1.69
Atg4aQ8C9S8 Gm45830-201ENSMUST00000212945 344 ntTSL 5 BASIC4.51□□□□□ -1.69
Atg4aQ8C9S8 Gm18892-201ENSMUST00000217628 881 ntBASIC4.51□□□□□ -1.69
Atg4aQ8C9S8 AC153529.1-201ENSMUST00000217818 370 ntBASIC4.51□□□□□ -1.69
Atg4aQ8C9S8 AC138401.2-201ENSMUST00000220461 365 ntBASIC4.51□□□□□ -1.69
Atg4aQ8C9S8 AC154635.1-201ENSMUST00000221433 400 ntTSL 3 BASIC4.51□□□□□ -1.69
Atg4aQ8C9S8 AC133189.2-201ENSMUST00000228527 392 ntBASIC4.51□□□□□ -1.69
Atg4aQ8C9S8 Tmed11-201ENSMUST00000004943 763 ntAPPRIS P1 TSL 1 (best) BASIC4.51□□□□□ -1.69
Atg4aQ8C9S8 Gm10058-201ENSMUST00000079797 893 ntAPPRIS P1 TSL 1 (best) BASIC4.51□□□□□ -1.69
Atg4aQ8C9S8 Gm26449-201ENSMUST00000082452 104 ntBASIC4.51□□□□□ -1.69
Atg4aQ8C9S8 n-R5s86-201ENSMUST00000083215 119 ntBASIC4.51□□□□□ -1.69
Atg4aQ8C9S8 Csn1s1-201ENSMUST00000094641 1411 ntAPPRIS P1 TSL 1 (best) BASIC4.51□□□□□ -1.69
Atg4aQ8C9S8 Olfr690-202ENSMUST00000211006 2048 ntAPPRIS P1 TSL 2 BASIC4.51□□□□□ -1.69
Atg4aQ8C9S8 A230081H15Rik-201ENSMUST00000218326 2929 ntBASIC4.51□□□□□ -1.69
Atg4aQ8C9S8 Olfr1274-ps-202ENSMUST00000216111 3395 ntAPPRIS P1 TSL 5 BASIC4.51□□□□□ -1.69
Atg4aQ8C9S8 Gm14781-201ENSMUST00000078469 1360 ntAPPRIS P1 TSL 1 (best) BASIC4.51□□□□□ -1.69
Atg4aQ8C9S8 Mageb5-201ENSMUST00000082048 1357 ntAPPRIS P1 TSL 1 (best) BASIC4.51□□□□□ -1.69
Atg4aQ8C9S8 Gm44164-201ENSMUST00000203605 2561 ntBASIC4.51□□□□□ -1.69
Atg4aQ8C9S8 Olfr963-202ENSMUST00000215649 2203 ntAPPRIS P1 TSL 5 BASIC4.5□□□□□ -1.69
Atg4aQ8C9S8 Kcnrg-201ENSMUST00000051184 1766 ntAPPRIS P2 TSL 1 (best) BASIC4.5□□□□□ -1.69
Atg4aQ8C9S8 Zfp72-201ENSMUST00000091481 1629 ntAPPRIS P1 TSL 1 (best) BASIC4.5□□□□□ -1.69
Atg4aQ8C9S8 Olfr263-202ENSMUST00000215804 3963 ntAPPRIS P1 TSL 5 BASIC4.5□□□□□ -1.69
Atg4aQ8C9S8 Sycp2-201ENSMUST00000081134 5717 ntAPPRIS P1 TSL 1 (best) BASIC4.5□□□□□ -1.69
Atg4aQ8C9S8 Olfr1042-202ENSMUST00000215624 5096 ntAPPRIS P1 BASIC4.5□□□□□ -1.69
Atg4aQ8C9S8 Gm4064-201ENSMUST00000187482 1561 ntAPPRIS P1 TSL 1 (best) BASIC4.5□□□□□ -1.69
Atg4aQ8C9S8 Gm6902-202ENSMUST00000191169 1581 ntAPPRIS P1 TSL 1 (best) BASIC4.5□□□□□ -1.69
Atg4aQ8C9S8 Cd84-205ENSMUST00000155802 3291 ntAPPRIS P3 TSL 1 (best) BASIC4.5□□□□□ -1.69
Atg4aQ8C9S8 Olfr1288-201ENSMUST00000104889 939 ntAPPRIS P1 BASIC4.5□□□□□ -1.69
Atg4aQ8C9S8 Gm11008-201ENSMUST00000109032 622 ntTSL 5 BASIC4.5□□□□□ -1.69
Atg4aQ8C9S8 Gm12873-201ENSMUST00000119988 422 ntBASIC4.5□□□□□ -1.69
Atg4aQ8C9S8 Gm15387-201ENSMUST00000120421 648 ntBASIC4.5□□□□□ -1.69
Atg4aQ8C9S8 Gm11656-201ENSMUST00000137462 395 ntTSL 5 BASIC4.5□□□□□ -1.69
Atg4aQ8C9S8 Gm15397-201ENSMUST00000145790 804 ntTSL 3 BASIC4.5□□□□□ -1.69
Atg4aQ8C9S8 Gm23959-201ENSMUST00000157208 324 ntBASIC4.5□□□□□ -1.69
Atg4aQ8C9S8 Gm26352-201ENSMUST00000158223 125 ntBASIC4.5□□□□□ -1.69
Atg4aQ8C9S8 Gm22890-201ENSMUST00000158642 144 ntBASIC4.5□□□□□ -1.69
Atg4aQ8C9S8 Eif3s6-ps2-201ENSMUST00000163304 219 ntBASIC4.5□□□□□ -1.69
Atg4aQ8C9S8 Hmgb1-ps7-201ENSMUST00000173370 648 ntBASIC4.5□□□□□ -1.69
Atg4aQ8C9S8 Gm10292-201ENSMUST00000183142 581 ntBASIC4.5□□□□□ -1.69
Atg4aQ8C9S8 Gm28298-201ENSMUST00000185287 622 ntTSL 1 (best) BASIC4.5□□□□□ -1.69
Atg4aQ8C9S8 Gm28127-201ENSMUST00000185293 622 ntTSL 1 (best) BASIC4.5□□□□□ -1.69
Atg4aQ8C9S8 Gm28176-201ENSMUST00000185322 622 ntTSL 1 (best) BASIC4.5□□□□□ -1.69
Atg4aQ8C9S8 Gm29315-201ENSMUST00000185844 622 ntTSL 1 (best) BASIC4.5□□□□□ -1.69
Atg4aQ8C9S8 Gm29581-201ENSMUST00000186083 622 ntTSL 1 (best) BASIC4.5□□□□□ -1.69
Atg4aQ8C9S8 Gm29210-201ENSMUST00000186332 622 ntTSL 1 (best) BASIC4.5□□□□□ -1.69
Atg4aQ8C9S8 Gm28761-201ENSMUST00000186540 622 ntTSL 1 (best) BASIC4.5□□□□□ -1.69
Atg4aQ8C9S8 Gm28170-201ENSMUST00000186892 622 ntTSL 1 (best) BASIC4.5□□□□□ -1.69
Atg4aQ8C9S8 Gm28073-201ENSMUST00000187174 622 ntTSL 1 (best) BASIC4.5□□□□□ -1.69
Atg4aQ8C9S8 Gm28725-201ENSMUST00000187372 622 ntTSL 1 (best) BASIC4.5□□□□□ -1.69
Atg4aQ8C9S8 Gm29655-201ENSMUST00000187728 622 ntTSL 1 (best) BASIC4.5□□□□□ -1.69
Atg4aQ8C9S8 Gm28280-201ENSMUST00000188196 622 ntTSL 1 (best) BASIC4.5□□□□□ -1.69
Atg4aQ8C9S8 Gm28091-201ENSMUST00000188421 622 ntTSL 1 (best) BASIC4.5□□□□□ -1.69
Atg4aQ8C9S8 Gm29215-202ENSMUST00000188659 621 ntTSL 5 BASIC4.5□□□□□ -1.69
Atg4aQ8C9S8 Gm28697-202ENSMUST00000188821 622 ntTSL 1 (best) BASIC4.5□□□□□ -1.69
Atg4aQ8C9S8 Gm28521-201ENSMUST00000188948 622 ntTSL 1 (best) BASIC4.5□□□□□ -1.69
Atg4aQ8C9S8 Gm28850-201ENSMUST00000189058 622 ntTSL 1 (best) BASIC4.5□□□□□ -1.69
Atg4aQ8C9S8 Gm28300-202ENSMUST00000189170 622 ntTSL 1 (best) BASIC4.5□□□□□ -1.69
Atg4aQ8C9S8 Gm28690-202ENSMUST00000190325 622 ntTSL 1 (best) BASIC4.5□□□□□ -1.69
Atg4aQ8C9S8 Gm28456-202ENSMUST00000190521 622 ntTSL 1 (best) BASIC4.5□□□□□ -1.69
Atg4aQ8C9S8 Gm28325-202ENSMUST00000191481 622 ntTSL 1 (best) BASIC4.5□□□□□ -1.69
Atg4aQ8C9S8 Gm37603-201ENSMUST00000192368 219 ntBASIC4.5□□□□□ -1.69
Atg4aQ8C9S8 Gm35070-201ENSMUST00000192589 621 ntTSL 5 BASIC4.5□□□□□ -1.69
Atg4aQ8C9S8 Gm37947-201ENSMUST00000192740 894 ntTSL 5 BASIC4.5□□□□□ -1.69
Atg4aQ8C9S8 Gm30686-202ENSMUST00000195371 621 ntTSL 5 BASIC4.5□□□□□ -1.69
Atg4aQ8C9S8 Gm36467-202ENSMUST00000195606 622 ntTSL 1 (best) BASIC4.5□□□□□ -1.69
Atg4aQ8C9S8 Mir142-201ENSMUST00000198092 64 ntBASIC4.5□□□□□ -1.69
Atg4aQ8C9S8 Gm44134-201ENSMUST00000203064 661 ntTSL 2 BASIC4.5□□□□□ -1.69
Atg4aQ8C9S8 Gm5317-201ENSMUST00000204445 847 ntBASIC4.5□□□□□ -1.69
Atg4aQ8C9S8 Gm20997-201ENSMUST00000205148 231 ntBASIC4.5□□□□□ -1.69
Atg4aQ8C9S8 Gm44864-201ENSMUST00000207292 505 ntTSL 2 BASIC4.5□□□□□ -1.69
Atg4aQ8C9S8 Gm45189-201ENSMUST00000208567 363 ntBASIC4.5□□□□□ -1.69
Atg4aQ8C9S8 Gm45636-201ENSMUST00000210497 1064 ntBASIC4.5□□□□□ -1.69
Atg4aQ8C9S8 Olfr907-202ENSMUST00000214003 1235 ntAPPRIS P1 TSL 3 BASIC4.5□□□□□ -1.69
Atg4aQ8C9S8 AC167013.2-202ENSMUST00000227035 333 ntBASIC4.5□□□□□ -1.69
Atg4aQ8C9S8 Gm5518-201ENSMUST00000084171 648 ntBASIC4.5□□□□□ -1.69
Atg4aQ8C9S8 Olfr681-201ENSMUST00000098157 948 ntAPPRIS P1 BASIC4.5□□□□□ -1.69
Atg4aQ8C9S8 Olfr679-201ENSMUST00000098158 952 ntAPPRIS P1 BASIC4.5□□□□□ -1.69
Atg4aQ8C9S8 Nbeal1-203ENSMUST00000160834 15731 ntAPPRIS P1 TSL 5 BASIC4.5□□□□□ -1.69
Atg4aQ8C9S8 Zfp759-201ENSMUST00000052716 3482 ntAPPRIS P1 TSL 1 (best) BASIC4.5□□□□□ -1.69
Atg4aQ8C9S8 Atrx-202ENSMUST00000113573 10275 ntAPPRIS P1 TSL 1 (best) BASIC4.5□□□□□ -1.69
Retrieved 100 of 76,532 protein–RNA pairs in 90.5 ms