Protein–RNA interactions for Protein: Q8BI79

Ccdc40, Coiled-coil domain-containing protein 40, mousemouse

Predictions only

Length 1,192 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc40Q8BI79 Gm26036-201ENSMUST00000158149 144 ntBASIC4.15□□□□□ -1.75
Ccdc40Q8BI79 4930486I03Rik-201ENSMUST00000161509 788 ntTSL 1 (best) BASIC4.15□□□□□ -1.75
Ccdc40Q8BI79 Ubl5-209ENSMUST00000161882 489 ntTSL 3 BASIC4.15□□□□□ -1.75
Ccdc40Q8BI79 Gm17155-201ENSMUST00000165969 473 ntBASIC4.15□□□□□ -1.75
Ccdc40Q8BI79 Malat1-202ENSMUST00000173314 556 ntTSL 3 BASIC4.15□□□□□ -1.75
Ccdc40Q8BI79 Gm22108-201ENSMUST00000177961 106 ntBASIC4.15□□□□□ -1.75
Ccdc40Q8BI79 Ang-ps3-201ENSMUST00000177964 433 ntBASIC4.15□□□□□ -1.75
Ccdc40Q8BI79 Gm14419-204ENSMUST00000178182 192 ntTSL 1 (best) BASIC4.15□□□□□ -1.75
Ccdc40Q8BI79 Gm2004-202ENSMUST00000178872 192 ntTSL 1 (best) BASIC4.15□□□□□ -1.75
Ccdc40Q8BI79 Gm24798-201ENSMUST00000179334 106 ntBASIC4.15□□□□□ -1.75
Ccdc40Q8BI79 Gm14295-203ENSMUST00000179435 192 ntTSL 5 BASIC4.15□□□□□ -1.75
Ccdc40Q8BI79 Gm27535-201ENSMUST00000183814 157 ntBASIC4.15□□□□□ -1.75
Ccdc40Q8BI79 Gm27188-201ENSMUST00000184383 510 ntTSL 3 BASIC4.15□□□□□ -1.75
Ccdc40Q8BI79 Vmn2r-ps149-201ENSMUST00000188423 590 ntBASIC4.15□□□□□ -1.75
Ccdc40Q8BI79 Gm28997-201ENSMUST00000188759 429 ntBASIC4.15□□□□□ -1.75
Ccdc40Q8BI79 1700025M24Rik-203ENSMUST00000191524 725 ntTSL 1 (best) BASIC4.15□□□□□ -1.75
Ccdc40Q8BI79 Gm38279-201ENSMUST00000194067 1131 ntBASIC4.15□□□□□ -1.75
Ccdc40Q8BI79 Gm44371-201ENSMUST00000204148 467 ntBASIC4.15□□□□□ -1.75
Ccdc40Q8BI79 Clec2f-202ENSMUST00000204981 657 ntTSL 1 (best) BASIC4.15□□□□□ -1.75
Ccdc40Q8BI79 Gm18423-201ENSMUST00000205144 1074 ntBASIC4.15□□□□□ -1.75
Ccdc40Q8BI79 Gm7587-201ENSMUST00000207618 1021 ntBASIC4.15□□□□□ -1.75
Ccdc40Q8BI79 Gm45554-202ENSMUST00000210964 1090 ntTSL 5 BASIC4.15□□□□□ -1.75
Ccdc40Q8BI79 Gm18016-201ENSMUST00000216119 801 ntBASIC4.15□□□□□ -1.75
Ccdc40Q8BI79 AC126043.1-201ENSMUST00000221304 1141 ntBASIC4.15□□□□□ -1.75
Ccdc40Q8BI79 Olfr479-201ENSMUST00000063151 1111 ntAPPRIS P1 BASIC4.15□□□□□ -1.75
Ccdc40Q8BI79 Sprr2e-201ENSMUST00000068399 647 ntAPPRIS P1 TSL 1 (best) BASIC4.15□□□□□ -1.75
Ccdc40Q8BI79 Gm22005-201ENSMUST00000082795 141 ntBASIC4.15□□□□□ -1.75
Ccdc40Q8BI79 Gm26121-201ENSMUST00000083364 162 ntBASIC4.15□□□□□ -1.75
Ccdc40Q8BI79 Vmn2r125-201ENSMUST00000096794 1110 ntAPPRIS P1 TSL 5 BASIC4.15□□□□□ -1.75
Ccdc40Q8BI79 Vmn1r82-201ENSMUST00000072801 4784 ntAPPRIS P1 BASIC4.15□□□□□ -1.75
Ccdc40Q8BI79 Arrdc3-201ENSMUST00000099356 4101 ntAPPRIS P1 TSL 1 (best) BASIC4.15□□□□□ -1.75
Ccdc40Q8BI79 Senp8-201ENSMUST00000051039 3682 ntAPPRIS P3 TSL 1 (best) BASIC4.15□□□□□ -1.75
Ccdc40Q8BI79 Gm43871-201ENSMUST00000204931 1955 ntBASIC4.14□□□□□ -1.75
Ccdc40Q8BI79 Olfr354-202ENSMUST00000217479 9539 ntAPPRIS P1 TSL 5 BASIC4.14□□□□□ -1.75
Ccdc40Q8BI79 Mir761-201ENSMUST00000103245 76 ntBASIC4.14□□□□□ -1.75
Ccdc40Q8BI79 Gm14401-201ENSMUST00000108968 247 ntTSL 5 BASIC4.14□□□□□ -1.75
Ccdc40Q8BI79 Gm16400-201ENSMUST00000116523 1029 ntBASIC4.14□□□□□ -1.75
Ccdc40Q8BI79 Gm11874-201ENSMUST00000117437 130 ntBASIC4.14□□□□□ -1.75
Ccdc40Q8BI79 Gm14628-201ENSMUST00000117508 635 ntBASIC4.14□□□□□ -1.75
Ccdc40Q8BI79 Gm16383-201ENSMUST00000118122 232 ntBASIC4.14□□□□□ -1.75
Ccdc40Q8BI79 Gm15116-201ENSMUST00000122248 663 ntBASIC4.14□□□□□ -1.75
Ccdc40Q8BI79 Gm12317-201ENSMUST00000122307 319 ntBASIC4.14□□□□□ -1.75
Ccdc40Q8BI79 Gm25555-201ENSMUST00000158078 111 ntBASIC4.14□□□□□ -1.75
Ccdc40Q8BI79 Gm16300-201ENSMUST00000160031 1279 ntBASIC4.14□□□□□ -1.75
Ccdc40Q8BI79 Gm1992-201ENSMUST00000161581 250 ntTSL 3 BASIC4.14□□□□□ -1.75
Ccdc40Q8BI79 Magea9-ps-202ENSMUST00000167328 899 ntBASIC4.14□□□□□ -1.75
Ccdc40Q8BI79 Gm20701-201ENSMUST00000176082 347 ntBASIC4.14□□□□□ -1.75
Ccdc40Q8BI79 Gm25019-201ENSMUST00000179732 110 ntBASIC4.14□□□□□ -1.75
Ccdc40Q8BI79 Gm5974-201ENSMUST00000181607 986 ntBASIC4.14□□□□□ -1.75
Ccdc40Q8BI79 2310030A07Rik-201ENSMUST00000186460 610 ntTSL 1 (best) BASIC4.14□□□□□ -1.75
Ccdc40Q8BI79 Ms4a2-205ENSMUST00000189641 647 ntTSL 3 BASIC4.14□□□□□ -1.75
Ccdc40Q8BI79 Gm18303-201ENSMUST00000190055 1176 ntBASIC4.14□□□□□ -1.75
Ccdc40Q8BI79 Gm28396-201ENSMUST00000190309 379 ntBASIC4.14□□□□□ -1.75
Ccdc40Q8BI79 Gm29479-201ENSMUST00000190352 455 ntBASIC4.14□□□□□ -1.75
Ccdc40Q8BI79 Gm43370-201ENSMUST00000196437 284 ntBASIC4.14□□□□□ -1.75
Ccdc40Q8BI79 Igkv3-12-1-201ENSMUST00000197093 351 ntBASIC4.14□□□□□ -1.75
Ccdc40Q8BI79 Trdv3-201ENSMUST00000198551 309 ntBASIC4.14□□□□□ -1.75
Ccdc40Q8BI79 Gm42758-201ENSMUST00000202146 283 ntBASIC4.14□□□□□ -1.75
Ccdc40Q8BI79 Gm8035-201ENSMUST00000204625 687 ntBASIC4.14□□□□□ -1.75
Ccdc40Q8BI79 Gm18462-201ENSMUST00000208112 417 ntBASIC4.14□□□□□ -1.75
Ccdc40Q8BI79 Gm5175-202ENSMUST00000219699 529 ntBASIC4.14□□□□□ -1.75
Ccdc40Q8BI79 AC154241.1-201ENSMUST00000223952 356 ntBASIC4.14□□□□□ -1.75
Ccdc40Q8BI79 AC124549.2-201ENSMUST00000224243 222 ntBASIC4.14□□□□□ -1.75
Ccdc40Q8BI79 CT010511.1-201ENSMUST00000224570 315 ntBASIC4.14□□□□□ -1.75
Ccdc40Q8BI79 Olfr727-201ENSMUST00000079142 1035 ntAPPRIS P1 BASIC4.14□□□□□ -1.75
Ccdc40Q8BI79 Olfr885-201ENSMUST00000081985 930 ntAPPRIS P1 BASIC4.14□□□□□ -1.75
Ccdc40Q8BI79 Gm23447-201ENSMUST00000082798 163 ntBASIC4.14□□□□□ -1.75
Ccdc40Q8BI79 n-R5s86-201ENSMUST00000083215 119 ntBASIC4.14□□□□□ -1.75
Ccdc40Q8BI79 Mir34b-201ENSMUST00000083558 84 ntBASIC4.14□□□□□ -1.75
Ccdc40Q8BI79 1700010D01Rik-201ENSMUST00000096366 507 ntTSL 1 (best) BASIC4.14□□□□□ -1.75
Ccdc40Q8BI79 Gm13762-201ENSMUST00000144908 2612 ntAPPRIS P1 TSL 3 BASIC4.14□□□□□ -1.75
Ccdc40Q8BI79 Gm2042-207ENSMUST00000181326 2440 ntAPPRIS ALT2 TSL 1 (best) BASIC4.14□□□□□ -1.75
Ccdc40Q8BI79 Erbin-207ENSMUST00000191275 5552 ntAPPRIS P3 TSL 1 (best) BASIC4.14□□□□□ -1.75
Ccdc40Q8BI79 AC132237.1-201ENSMUST00000220950 4475 ntBASIC4.14□□□□□ -1.75
Ccdc40Q8BI79 Olfr801-204ENSMUST00000216067 4014 ntAPPRIS P1 TSL 5 BASIC4.13□□□□□ -1.75
Ccdc40Q8BI79 Gm28634-201ENSMUST00000191087 2613 ntBASIC4.13□□□□□ -1.75
Ccdc40Q8BI79 AC153522.2-201ENSMUST00000218389 3853 ntBASIC4.13□□□□□ -1.75
Ccdc40Q8BI79 Gm43259-201ENSMUST00000198446 3277 ntBASIC4.13□□□□□ -1.75
Ccdc40Q8BI79 Gm7485-201ENSMUST00000119502 1109 ntBASIC4.13□□□□□ -1.75
Ccdc40Q8BI79 Gm11746-201ENSMUST00000119843 821 ntBASIC4.13□□□□□ -1.75
Ccdc40Q8BI79 Gm4852-201ENSMUST00000121202 729 ntBASIC4.13□□□□□ -1.75
Ccdc40Q8BI79 Gm7618-201ENSMUST00000121643 171 ntBASIC4.13□□□□□ -1.75
Ccdc40Q8BI79 Gm14473-201ENSMUST00000122269 557 ntBASIC4.13□□□□□ -1.75
Ccdc40Q8BI79 Gm14161-201ENSMUST00000137020 339 ntTSL 1 (best) BASIC4.13□□□□□ -1.75
Ccdc40Q8BI79 1810065E05Rik-201ENSMUST00000013797 926 ntAPPRIS P1 TSL 1 (best) BASIC4.13□□□□□ -1.75
Ccdc40Q8BI79 Gm23231-201ENSMUST00000157299 104 ntBASIC4.13□□□□□ -1.75
Ccdc40Q8BI79 Obox2-202ENSMUST00000172478 818 ntAPPRIS P1 TSL 5 BASIC4.13□□□□□ -1.75
Ccdc40Q8BI79 Vmn2r-ps75-201ENSMUST00000173251 213 ntBASIC4.13□□□□□ -1.75
Ccdc40Q8BI79 Gm24417-201ENSMUST00000178123 79 ntBASIC4.13□□□□□ -1.75
Ccdc40Q8BI79 Gm24653-201ENSMUST00000178541 79 ntBASIC4.13□□□□□ -1.75
Ccdc40Q8BI79 Gm25934-201ENSMUST00000178642 79 ntBASIC4.13□□□□□ -1.75
Ccdc40Q8BI79 Gm29524-201ENSMUST00000190819 699 ntBASIC4.13□□□□□ -1.75
Ccdc40Q8BI79 Gm37209-201ENSMUST00000194109 1276 ntBASIC4.13□□□□□ -1.75
Ccdc40Q8BI79 Gm43848-201ENSMUST00000198060 1247 ntBASIC4.13□□□□□ -1.75
Ccdc40Q8BI79 4933402J10Rik-202ENSMUST00000198882 1167 ntTSL 1 (best) BASIC4.13□□□□□ -1.75
Ccdc40Q8BI79 Gm11213-202ENSMUST00000210529 524 ntAPPRIS P1 TSL 1 (best) BASIC4.13□□□□□ -1.75
Ccdc40Q8BI79 Gm9655-201ENSMUST00000211321 1284 ntBASIC4.13□□□□□ -1.75
Ccdc40Q8BI79 Gm45409-201ENSMUST00000211486 252 ntBASIC4.13□□□□□ -1.75
Ccdc40Q8BI79 Calml4-203ENSMUST00000213643 710 ntTSL 2 BASIC4.13□□□□□ -1.75
Ccdc40Q8BI79 Dynap-201ENSMUST00000025390 1227 ntAPPRIS P1 TSL 1 (best) BASIC4.13□□□□□ -1.75
Retrieved 100 of 76,532 protein–RNA pairs in 82.8 ms