Protein–RNA interactions for Protein: Q6ZQF0

Topbp1, DNA topoisomerase 2-binding protein 1, mousemouse

Predictions only

Length 1,515 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Topbp1Q6ZQF0 Gm21572-201ENSMUST00000180134 498 ntBASIC4.73□□□□□ -1.65
Topbp1Q6ZQF0 Gm21529-201ENSMUST00000180175 498 ntBASIC4.73□□□□□ -1.65
Topbp1Q6ZQF0 Gm29370-202ENSMUST00000187476 499 ntBASIC4.73□□□□□ -1.65
Topbp1Q6ZQF0 Csn1s2a-209ENSMUST00000200322 797 ntAPPRIS ALT2 TSL 2 BASIC4.73□□□□□ -1.65
Topbp1Q6ZQF0 AC138290.1-201ENSMUST00000219242 820 ntTSL 5 BASIC4.73□□□□□ -1.65
Topbp1Q6ZQF0 AC165164.1-202ENSMUST00000219324 649 ntTSL 3 BASIC4.73□□□□□ -1.65
Topbp1Q6ZQF0 Smcp-201ENSMUST00000098888 861 ntAPPRIS P1 TSL 1 (best) BASIC4.73□□□□□ -1.65
Topbp1Q6ZQF0 Olfr1099-201ENSMUST00000099871 1031 ntAPPRIS P1 BASIC4.73□□□□□ -1.65
Topbp1Q6ZQF0 Abcg2-201ENSMUST00000031822 5717 ntAPPRIS P1 TSL 1 (best) BASIC4.73□□□□□ -1.65
Topbp1Q6ZQF0 Ptprd-204ENSMUST00000102834 8084 ntTSL 1 (best) BASIC4.73□□□□□ -1.65
Topbp1Q6ZQF0 Zfp759-201ENSMUST00000052716 3482 ntAPPRIS P1 TSL 1 (best) BASIC4.73□□□□□ -1.65
Topbp1Q6ZQF0 Gm2042-201ENSMUST00000110145 1894 ntAPPRIS P3 TSL 1 (best) BASIC4.73□□□□□ -1.65
Topbp1Q6ZQF0 Olfr677-202ENSMUST00000213204 3227 ntAPPRIS P1 TSL 5 BASIC4.73□□□□□ -1.65
Topbp1Q6ZQF0 Zfp979-201ENSMUST00000037565 2558 ntAPPRIS P1 TSL 2 BASIC4.73□□□□□ -1.65
Topbp1Q6ZQF0 Nlrp9a-202ENSMUST00000108387 3336 ntAPPRIS P4 TSL 1 (best) BASIC4.73□□□□□ -1.65
Topbp1Q6ZQF0 Ipcef1-209ENSMUST00000170680 1174 ntTSL 5 BASIC4.72□□□□□ -1.65
Topbp1Q6ZQF0 Mir3470b-201ENSMUST00000175563 126 ntBASIC4.72□□□□□ -1.65
Topbp1Q6ZQF0 Gm43812-201ENSMUST00000200976 581 ntTSL 5 BASIC4.72□□□□□ -1.65
Topbp1Q6ZQF0 4930428D20Rik-201ENSMUST00000201886 546 ntTSL 1 (best) BASIC4.72□□□□□ -1.65
Topbp1Q6ZQF0 4930513D17Rik-203ENSMUST00000202800 1159 ntTSL 1 (best) BASIC4.72□□□□□ -1.65
Topbp1Q6ZQF0 Gm45579-201ENSMUST00000209367 887 ntTSL 5 BASIC4.72□□□□□ -1.65
Topbp1Q6ZQF0 Gm5649-201ENSMUST00000217918 951 ntBASIC4.72□□□□□ -1.65
Topbp1Q6ZQF0 Gm16419-201ENSMUST00000221057 625 ntBASIC4.72□□□□□ -1.65
Topbp1Q6ZQF0 Gm4779-201ENSMUST00000056225 672 ntTSL 5 BASIC4.72□□□□□ -1.65
Topbp1Q6ZQF0 Gm38269-201ENSMUST00000194549 3298 ntBASIC4.72□□□□□ -1.65
Topbp1Q6ZQF0 Vmn1r14-203ENSMUST00000227574 7394 ntAPPRIS ALT2 BASIC4.72□□□□□ -1.65
Topbp1Q6ZQF0 Olfr1000-203ENSMUST00000216571 2028 ntAPPRIS P1 TSL 5 BASIC4.72□□□□□ -1.65
Topbp1Q6ZQF0 Olfr728-202ENSMUST00000213685 7087 ntAPPRIS P1 TSL 5 BASIC4.72□□□□□ -1.65
Topbp1Q6ZQF0 Erbin-204ENSMUST00000169083 5435 ntAPPRIS ALT2 TSL 1 (best) BASIC4.72□□□□□ -1.65
Topbp1Q6ZQF0 Olfr107-202ENSMUST00000215894 2512 ntAPPRIS P1 TSL 5 BASIC4.72□□□□□ -1.65
Topbp1Q6ZQF0 Gm12793-201ENSMUST00000119268 292 ntBASIC4.72□□□□□ -1.65
Topbp1Q6ZQF0 Gm11260-201ENSMUST00000121163 942 ntBASIC4.72□□□□□ -1.65
Topbp1Q6ZQF0 Gm12222-201ENSMUST00000121368 260 ntBASIC4.72□□□□□ -1.65
Topbp1Q6ZQF0 Gm26215-201ENSMUST00000158584 139 ntBASIC4.72□□□□□ -1.65
Topbp1Q6ZQF0 Gm18505-201ENSMUST00000187360 790 ntBASIC4.72□□□□□ -1.65
Topbp1Q6ZQF0 Gm43685-201ENSMUST00000198876 706 ntTSL 3 BASIC4.72□□□□□ -1.65
Topbp1Q6ZQF0 AC129541.1-201ENSMUST00000226940 523 ntBASIC4.72□□□□□ -1.65
Topbp1Q6ZQF0 Gm813-201ENSMUST00000099663 702 ntAPPRIS P1 TSL 1 (best) BASIC4.72□□□□□ -1.65
Topbp1Q6ZQF0 Olfr729-202ENSMUST00000213163 4283 ntAPPRIS P1 TSL 5 BASIC4.72□□□□□ -1.65
Topbp1Q6ZQF0 Olfr1216-202ENSMUST00000216000 3595 ntAPPRIS P1 TSL 5 BASIC4.71□□□□□ -1.65
Topbp1Q6ZQF0 Cubn-201ENSMUST00000091436 11262 ntAPPRIS P1 TSL 5 BASIC4.71□□□□□ -1.65
Topbp1Q6ZQF0 Gm43705-201ENSMUST00000195958 3717 ntBASIC4.71□□□□□ -1.65
Topbp1Q6ZQF0 Olfr776-202ENSMUST00000213512 3499 ntAPPRIS P1 TSL 5 BASIC4.71□□□□□ -1.66
Topbp1Q6ZQF0 Olfr1471-205ENSMUST00000217482 1545 ntAPPRIS P1 TSL 5 BASIC4.71□□□□□ -1.66
Topbp1Q6ZQF0 Vmn1r81-204ENSMUST00000228482 13495 ntAPPRIS ALT2 BASIC4.71□□□□□ -1.66
Topbp1Q6ZQF0 Gm24068-201ENSMUST00000104513 132 ntBASIC4.71□□□□□ -1.66
Topbp1Q6ZQF0 Gm12467-201ENSMUST00000117625 745 ntBASIC4.71□□□□□ -1.66
Topbp1Q6ZQF0 Gm7071-201ENSMUST00000120458 462 ntBASIC4.71□□□□□ -1.66
Topbp1Q6ZQF0 Gm16068-201ENSMUST00000136557 504 ntTSL 3 BASIC4.71□□□□□ -1.66
Topbp1Q6ZQF0 Cyp2b26-ps-201ENSMUST00000206238 1090 ntBASIC4.71□□□□□ -1.66
Topbp1Q6ZQF0 Gm44869-201ENSMUST00000208836 357 ntBASIC4.71□□□□□ -1.66
Topbp1Q6ZQF0 CT030161.1-201ENSMUST00000218411 124 ntBASIC4.71□□□□□ -1.66
Topbp1Q6ZQF0 Gm17820-201ENSMUST00000220213 1068 ntBASIC4.71□□□□□ -1.66
Topbp1Q6ZQF0 Gm24950-201ENSMUST00000082768 191 ntBASIC4.71□□□□□ -1.66
Topbp1Q6ZQF0 Gm23971-201ENSMUST00000083317 191 ntBASIC4.71□□□□□ -1.66
Topbp1Q6ZQF0 Gm23849-201ENSMUST00000083833 191 ntBASIC4.71□□□□□ -1.66
Topbp1Q6ZQF0 Gm26316-201ENSMUST00000083886 191 ntBASIC4.71□□□□□ -1.66
Topbp1Q6ZQF0 Rnu2-10-201ENSMUST00000084010 191 ntBASIC4.71□□□□□ -1.66
Topbp1Q6ZQF0 Gm45257-201ENSMUST00000210301 3998 ntBASIC4.71□□□□□ -1.66
Topbp1Q6ZQF0 Hdx-202ENSMUST00000113422 9534 ntAPPRIS P1 TSL 1 (best) BASIC4.71□□□□□ -1.66
Topbp1Q6ZQF0 Zfp987-201ENSMUST00000091878 2798 ntAPPRIS P1 TSL 1 (best) BASIC4.71□□□□□ -1.66
Topbp1Q6ZQF0 Dst-215ENSMUST00000185269 16340 ntTSL 5 BASIC4.7□□□□□ -1.66
Topbp1Q6ZQF0 C630028M04Rik-201ENSMUST00000141452 3387 ntTSL 1 (best) BASIC4.7□□□□□ -1.66
Topbp1Q6ZQF0 Gm37056-201ENSMUST00000192141 1865 ntBASIC4.7□□□□□ -1.66
Topbp1Q6ZQF0 Gm14065-201ENSMUST00000120848 585 ntBASIC4.7□□□□□ -1.66
Topbp1Q6ZQF0 Gm13502-201ENSMUST00000121574 684 ntBASIC4.7□□□□□ -1.66
Topbp1Q6ZQF0 Gm18644-201ENSMUST00000211458 815 ntBASIC4.7□□□□□ -1.66
Topbp1Q6ZQF0 Defb18-201ENSMUST00000097818 258 ntAPPRIS P1 TSL 1 (best) BASIC4.7□□□□□ -1.66
Topbp1Q6ZQF0 Slc25a36-201ENSMUST00000035024 4043 ntTSL 1 (best) BASIC4.7□□□□□ -1.66
Topbp1Q6ZQF0 Gm30849-201ENSMUST00000214503 1379 ntTSL 5 BASIC4.7□□□□□ -1.66
Topbp1Q6ZQF0 Ccnb3-201ENSMUST00000056725 4475 ntAPPRIS P1 TSL 5 BASIC4.7□□□□□ -1.66
Topbp1Q6ZQF0 Olfr919-202ENSMUST00000215612 1992 ntAPPRIS ALT2 TSL 5 BASIC4.7□□□□□ -1.66
Topbp1Q6ZQF0 Olfr1173-201ENSMUST00000099830 2268 ntAPPRIS P1 TSL 5 BASIC4.7□□□□□ -1.66
Topbp1Q6ZQF0 Muc15-203ENSMUST00000111017 3095 ntTSL 1 (best) BASIC4.69□□□□□ -1.66
Topbp1Q6ZQF0 Olfr1296-ps1-201ENSMUST00000117697 939 ntBASIC4.69□□□□□ -1.66
Topbp1Q6ZQF0 Gm5943-201ENSMUST00000119458 459 ntBASIC4.69□□□□□ -1.66
Topbp1Q6ZQF0 Gm9732-202ENSMUST00000163912 1757 ntAPPRIS P5 TSL 5 BASIC4.69□□□□□ -1.66
Topbp1Q6ZQF0 Gm26061-201ENSMUST00000175584 108 ntBASIC4.69□□□□□ -1.66
Topbp1Q6ZQF0 Gm24019-201ENSMUST00000178620 107 ntBASIC4.69□□□□□ -1.66
Topbp1Q6ZQF0 Gm26243-201ENSMUST00000179260 107 ntBASIC4.69□□□□□ -1.66
Topbp1Q6ZQF0 Gm33973-201ENSMUST00000195148 534 ntBASIC4.69□□□□□ -1.66
Topbp1Q6ZQF0 Sult2a7-202ENSMUST00000209744 792 ntTSL 5 BASIC4.69□□□□□ -1.66
Topbp1Q6ZQF0 Gm29674-201ENSMUST00000218791 1139 ntTSL 5 BASIC4.69□□□□□ -1.66
Topbp1Q6ZQF0 Gm23296-201ENSMUST00000082555 107 ntBASIC4.69□□□□□ -1.66
Topbp1Q6ZQF0 Gm24859-201ENSMUST00000082729 107 ntBASIC4.69□□□□□ -1.66
Topbp1Q6ZQF0 Olfr1046-201ENSMUST00000099902 951 ntAPPRIS P1 BASIC4.69□□□□□ -1.66
Topbp1Q6ZQF0 Vmn1r43-204ENSMUST00000226983 12805 ntAPPRIS P1 BASIC4.69□□□□□ -1.66
Topbp1Q6ZQF0 Ccr5-202ENSMUST00000111442 8227 ntAPPRIS P1 TSL 1 (best) BASIC4.69□□□□□ -1.66
Topbp1Q6ZQF0 Olfr102-202ENSMUST00000217590 2783 ntAPPRIS P1 TSL 5 BASIC4.69□□□□□ -1.66
Topbp1Q6ZQF0 Vmn2r65-201ENSMUST00000044583 2538 ntAPPRIS P1 TSL 5 BASIC4.69□□□□□ -1.66
Topbp1Q6ZQF0 Gmnc-201ENSMUST00000089832 4083 ntAPPRIS P1 TSL 1 (best) BASIC4.69□□□□□ -1.66
Topbp1Q6ZQF0 Gm26522-201ENSMUST00000181565 1555 ntTSL 1 (best) BASIC4.68□□□□□ -1.66
Topbp1Q6ZQF0 Gm9119-201ENSMUST00000118866 495 ntBASIC4.68□□□□□ -1.66
Topbp1Q6ZQF0 Gm11471-201ENSMUST00000121824 198 ntBASIC4.68□□□□□ -1.66
Topbp1Q6ZQF0 Gm15323-201ENSMUST00000156109 429 ntTSL 3 BASIC4.68□□□□□ -1.66
Topbp1Q6ZQF0 Gm7837-201ENSMUST00000190873 412 ntBASIC4.68□□□□□ -1.66
Topbp1Q6ZQF0 Gm44887-201ENSMUST00000208980 178 ntBASIC4.68□□□□□ -1.66
Topbp1Q6ZQF0 Gm45246-201ENSMUST00000210820 367 ntBASIC4.68□□□□□ -1.66
Topbp1Q6ZQF0 Olfr1091-ps1-201ENSMUST00000216676 595 ntBASIC4.68□□□□□ -1.66
Topbp1Q6ZQF0 CT030704.1-201ENSMUST00000227521 699 ntBASIC4.68□□□□□ -1.66
Retrieved 100 of 76,532 protein–RNA pairs in 80.5 ms