Protein–RNA interactions for Protein: Q6P9L4

Usp49, Ubiquitin carboxyl-terminal hydrolase 49, mousemouse

Predictions only

Length 685 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp49Q6P9L4 Gm37329-201ENSMUST00000192973 2057 ntBASIC4.75□□□□□ -1.65
Usp49Q6P9L4 Olfr203-202ENSMUST00000215893 1521 ntAPPRIS P1 TSL 5 BASIC4.75□□□□□ -1.65
Usp49Q6P9L4 Gm8104-201ENSMUST00000168165 1761 ntAPPRIS P1 TSL 5 BASIC4.75□□□□□ -1.65
Usp49Q6P9L4 Olfr106-ps-202ENSMUST00000214704 1791 ntAPPRIS P1 TSL 5 BASIC4.75□□□□□ -1.65
Usp49Q6P9L4 Fam111a-201ENSMUST00000025595 3267 ntAPPRIS P3 TSL 1 (best) BASIC4.75□□□□□ -1.65
Usp49Q6P9L4 Trps1-202ENSMUST00000165201 9859 ntAPPRIS P3 TSL 1 (best) BASIC4.74□□□□□ -1.65
Usp49Q6P9L4 4932429P05Rik-201ENSMUST00000113958 3093 ntAPPRIS P1 TSL 1 (best) BASIC4.74□□□□□ -1.65
Usp49Q6P9L4 Cdh19-201ENSMUST00000094626 3914 ntAPPRIS P1 TSL 1 (best) BASIC4.74□□□□□ -1.65
Usp49Q6P9L4 Crisp3-201ENSMUST00000026499 1417 ntAPPRIS P1 TSL 1 (best) BASIC4.74□□□□□ -1.65
Usp49Q6P9L4 Abi3bp-203ENSMUST00000096013 4495 ntAPPRIS ALT2 TSL 1 (best) BASIC4.74□□□□□ -1.65
Usp49Q6P9L4 Gm773-201ENSMUST00000101561 951 ntAPPRIS P1 TSL 1 (best) BASIC4.74□□□□□ -1.65
Usp49Q6P9L4 Mir466n-201ENSMUST00000104798 94 ntBASIC4.74□□□□□ -1.65
Usp49Q6P9L4 Gm14385-201ENSMUST00000116315 876 ntBASIC4.74□□□□□ -1.65
Usp49Q6P9L4 Mir467h-201ENSMUST00000116759 121 ntBASIC4.74□□□□□ -1.65
Usp49Q6P9L4 Gm13550-201ENSMUST00000118185 525 ntBASIC4.74□□□□□ -1.65
Usp49Q6P9L4 Gm14750-201ENSMUST00000118262 516 ntBASIC4.74□□□□□ -1.65
Usp49Q6P9L4 Gm13087-201ENSMUST00000118298 256 ntBASIC4.74□□□□□ -1.65
Usp49Q6P9L4 Gm15923-201ENSMUST00000119300 1169 ntBASIC4.74□□□□□ -1.65
Usp49Q6P9L4 Gm11625-201ENSMUST00000119535 296 ntBASIC4.74□□□□□ -1.65
Usp49Q6P9L4 Gm12340-201ENSMUST00000121617 462 ntBASIC4.74□□□□□ -1.65
Usp49Q6P9L4 Llph-ps2-201ENSMUST00000122000 393 ntBASIC4.74□□□□□ -1.65
Usp49Q6P9L4 Gm24517-201ENSMUST00000122560 107 ntBASIC4.74□□□□□ -1.65
Usp49Q6P9L4 Gm13618-201ENSMUST00000128859 384 ntTSL 5 BASIC4.74□□□□□ -1.65
Usp49Q6P9L4 Zfp965-204ENSMUST00000143490 297 ntTSL 5 BASIC4.74□□□□□ -1.65
Usp49Q6P9L4 Gm13348-201ENSMUST00000147324 690 ntTSL 5 BASIC4.74□□□□□ -1.65
Usp49Q6P9L4 Gm4487-201ENSMUST00000150617 442 ntBASIC4.74□□□□□ -1.65
Usp49Q6P9L4 4930441J16Rik-201ENSMUST00000153743 516 ntTSL 1 (best) BASIC4.74□□□□□ -1.65
Usp49Q6P9L4 Vmn1r224-201ENSMUST00000170076 897 ntAPPRIS P1 BASIC4.74□□□□□ -1.65
Usp49Q6P9L4 Gm12002-203ENSMUST00000174550 923 ntTSL 3 BASIC4.74□□□□□ -1.65
Usp49Q6P9L4 Gm11007-201ENSMUST00000177700 195 ntTSL 1 (best) BASIC4.74□□□□□ -1.65
Usp49Q6P9L4 Gm2007-201ENSMUST00000177981 195 ntTSL 5 BASIC4.74□□□□□ -1.65
Usp49Q6P9L4 Gm2004-203ENSMUST00000179349 195 ntTSL 1 (best) BASIC4.74□□□□□ -1.65
Usp49Q6P9L4 Gm26991-201ENSMUST00000180950 620 ntBASIC4.74□□□□□ -1.65
Usp49Q6P9L4 Gm27222-201ENSMUST00000183398 427 ntTSL 5 BASIC4.74□□□□□ -1.65
Usp49Q6P9L4 A930005H10Rik-202ENSMUST00000185424 433 ntTSL 1 (best) BASIC4.74□□□□□ -1.65
Usp49Q6P9L4 Il20-202ENSMUST00000188581 465 ntTSL 1 (best) BASIC4.74□□□□□ -1.65
Usp49Q6P9L4 1700074A21Rik-201ENSMUST00000192404 346 ntBASIC4.74□□□□□ -1.65
Usp49Q6P9L4 Gm38061-201ENSMUST00000192490 365 ntBASIC4.74□□□□□ -1.65
Usp49Q6P9L4 Gm37979-201ENSMUST00000193065 712 ntBASIC4.74□□□□□ -1.65
Usp49Q6P9L4 Gm37340-201ENSMUST00000193124 759 ntTSL 5 BASIC4.74□□□□□ -1.65
Usp49Q6P9L4 Gm37473-201ENSMUST00000195079 674 ntTSL 5 BASIC4.74□□□□□ -1.65
Usp49Q6P9L4 Gm42666-201ENSMUST00000201954 152 ntBASIC4.74□□□□□ -1.65
Usp49Q6P9L4 Gm44032-201ENSMUST00000204841 166 ntBASIC4.74□□□□□ -1.65
Usp49Q6P9L4 Mir670hg-207ENSMUST00000211619 819 ntTSL 5 BASIC4.74□□□□□ -1.65
Usp49Q6P9L4 AL935138.1-201ENSMUST00000215309 196 ntBASIC4.74□□□□□ -1.65
Usp49Q6P9L4 Slfn5os-202ENSMUST00000216469 550 ntTSL 5 BASIC4.74□□□□□ -1.65
Usp49Q6P9L4 AC131677.1-201ENSMUST00000218721 535 ntBASIC4.74□□□□□ -1.65
Usp49Q6P9L4 AC162376.1-201ENSMUST00000220120 435 ntBASIC4.74□□□□□ -1.65
Usp49Q6P9L4 CT030657.1-201ENSMUST00000222397 378 ntTSL 5 BASIC4.74□□□□□ -1.65
Usp49Q6P9L4 Klrc1-202ENSMUST00000032271 822 ntAPPRIS ALT2 TSL 1 (best) BASIC4.74□□□□□ -1.65
Usp49Q6P9L4 n-R5s160-201ENSMUST00000083096 120 ntBASIC4.74□□□□□ -1.65
Usp49Q6P9L4 Ssxb3-202ENSMUST00000089379 604 ntAPPRIS P1 TSL 1 (best) BASIC4.74□□□□□ -1.65
Usp49Q6P9L4 Olfr741-203ENSMUST00000213903 3305 ntAPPRIS P1 TSL 5 BASIC4.74□□□□□ -1.65
Usp49Q6P9L4 Spink5-201ENSMUST00000069245 4785 ntAPPRIS P1 TSL 1 (best) BASIC4.74□□□□□ -1.65
Usp49Q6P9L4 AC124426.1-203ENSMUST00000221814 1362 ntBASIC4.74□□□□□ -1.65
Usp49Q6P9L4 Gm37412-201ENSMUST00000194866 4321 ntBASIC4.74□□□□□ -1.65
Usp49Q6P9L4 Gm4631-202ENSMUST00000121393 4402 ntAPPRIS P1 TSL 2 BASIC4.74□□□□□ -1.65
Usp49Q6P9L4 Ptprc-203ENSMUST00000182283 4702 ntAPPRIS P3 TSL 1 (best) BASIC4.74□□□□□ -1.65
Usp49Q6P9L4 AC164102.1-201ENSMUST00000220524 1553 ntBASIC4.74□□□□□ -1.65
Usp49Q6P9L4 Olfr1012-203ENSMUST00000214958 3076 ntAPPRIS P1 TSL 3 BASIC4.74□□□□□ -1.65
Usp49Q6P9L4 Olfr1317-204ENSMUST00000216988 2488 ntAPPRIS P1 TSL 5 BASIC4.73□□□□□ -1.65
Usp49Q6P9L4 Gabra3-202ENSMUST00000114554 1790 ntAPPRIS ALT2 TSL 5 BASIC4.73□□□□□ -1.65
Usp49Q6P9L4 Igsf10-201ENSMUST00000039419 10084 ntAPPRIS P1 TSL 5 BASIC4.73□□□□□ -1.65
Usp49Q6P9L4 Neto2-201ENSMUST00000109686 5610 ntTSL 1 (best) BASIC4.73□□□□□ -1.65
Usp49Q6P9L4 Gm43092-201ENSMUST00000202986 1854 ntBASIC4.73□□□□□ -1.65
Usp49Q6P9L4 Vmn1r184-204ENSMUST00000227534 4807 ntAPPRIS P1 BASIC4.73□□□□□ -1.65
Usp49Q6P9L4 Gm9972-201ENSMUST00000069051 1533 ntAPPRIS P1 BASIC4.73□□□□□ -1.65
Usp49Q6P9L4 Gm20139-202ENSMUST00000216041 3888 ntTSL 1 (best) BASIC4.73□□□□□ -1.65
Usp49Q6P9L4 Smim9-201ENSMUST00000101433 706 ntAPPRIS P1 TSL 1 (best) BASIC4.73□□□□□ -1.65
Usp49Q6P9L4 Igkv14-100-201ENSMUST00000103325 350 ntAPPRIS ALT2 BASIC4.73□□□□□ -1.65
Usp49Q6P9L4 Gm23431-201ENSMUST00000104006 107 ntBASIC4.73□□□□□ -1.65
Usp49Q6P9L4 Olfr1003-ps1-201ENSMUST00000122238 717 ntBASIC4.73□□□□□ -1.65
Usp49Q6P9L4 Gm10721-201ENSMUST00000143083 669 ntAPPRIS P1 TSL 5 BASIC4.73□□□□□ -1.65
Usp49Q6P9L4 Platr3-201ENSMUST00000146980 412 ntTSL 1 (best) BASIC4.73□□□□□ -1.65
Usp49Q6P9L4 Gm16084-201ENSMUST00000148122 620 ntTSL 3 BASIC4.73□□□□□ -1.65
Usp49Q6P9L4 Gm10715-201ENSMUST00000155807 675 ntAPPRIS ALT2 TSL 5 BASIC4.73□□□□□ -1.65
Usp49Q6P9L4 Gm24532-201ENSMUST00000157951 286 ntBASIC4.73□□□□□ -1.65
Usp49Q6P9L4 Gm22156-201ENSMUST00000158409 141 ntBASIC4.73□□□□□ -1.65
Usp49Q6P9L4 Gm17416-201ENSMUST00000163724 201 ntAPPRIS P1 BASIC4.73□□□□□ -1.65
Usp49Q6P9L4 Vmn1r-ps27-201ENSMUST00000174619 985 ntBASIC4.73□□□□□ -1.65
Usp49Q6P9L4 Vmn1r23-201ENSMUST00000175817 997 ntAPPRIS P1 BASIC4.73□□□□□ -1.65
Usp49Q6P9L4 Gm17535-201ENSMUST00000178641 672 ntAPPRIS P1 TSL 5 BASIC4.73□□□□□ -1.65
Usp49Q6P9L4 Gm11168-204ENSMUST00000179881 672 ntAPPRIS ALT2 TSL 5 BASIC4.73□□□□□ -1.65
Usp49Q6P9L4 1700040F17Rik-201ENSMUST00000187158 817 ntTSL 1 (best) BASIC4.73□□□□□ -1.65
Usp49Q6P9L4 Gm28786-201ENSMUST00000187228 172 ntTSL 1 (best) BASIC4.73□□□□□ -1.65
Usp49Q6P9L4 Gm35702-201ENSMUST00000198653 511 ntBASIC4.73□□□□□ -1.65
Usp49Q6P9L4 Ighv1-79-201ENSMUST00000200152 350 ntBASIC4.73□□□□□ -1.65
Usp49Q6P9L4 AC122210.1-201ENSMUST00000217923 675 ntTSL 3 BASIC4.73□□□□□ -1.65
Usp49Q6P9L4 AC164297.5-201ENSMUST00000224365 198 ntBASIC4.73□□□□□ -1.65
Usp49Q6P9L4 AC113031.2-201ENSMUST00000226132 579 ntBASIC4.73□□□□□ -1.65
Usp49Q6P9L4 AC130823.2-201ENSMUST00000226169 290 ntBASIC4.73□□□□□ -1.65
Usp49Q6P9L4 Olfr453-201ENSMUST00000053647 954 ntAPPRIS P1 BASIC4.73□□□□□ -1.65
Usp49Q6P9L4 Bcl2a1b-201ENSMUST00000068569 817 ntAPPRIS P1 TSL 1 (best) BASIC4.73□□□□□ -1.65
Usp49Q6P9L4 Olfr1201-201ENSMUST00000073458 924 ntAPPRIS P1 BASIC4.73□□□□□ -1.65
Usp49Q6P9L4 Gm24921-201ENSMUST00000083024 107 ntBASIC4.73□□□□□ -1.65
Usp49Q6P9L4 Mir421-201ENSMUST00000083575 76 ntBASIC4.73□□□□□ -1.65
Usp49Q6P9L4 Gm10718-201ENSMUST00000099046 681 ntAPPRIS P1 TSL 5 BASIC4.73□□□□□ -1.65
Usp49Q6P9L4 Olfr1099-201ENSMUST00000099871 1031 ntAPPRIS P1 BASIC4.73□□□□□ -1.65
Usp49Q6P9L4 Pds5b-203ENSMUST00000110486 2900 ntTSL 1 (best) BASIC4.73□□□□□ -1.65
Usp49Q6P9L4 Vmn2r-ps49-201ENSMUST00000173160 3551 ntBASIC4.73□□□□□ -1.65
Retrieved 100 of 76,532 protein–RNA pairs in 68.6 ms