Protein–RNA interactions for Protein: Q61164

Ctcf, Transcriptional repressor CTCF, mousemouse

Known RBP Predictions only

Length 736 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CtcfQ61164 Gm18150-201ENSMUST00000195341 645 ntBASIC4.62□□□□□ -1.67
CtcfQ61164 Gm43489-201ENSMUST00000196810 993 ntBASIC4.62□□□□□ -1.67
CtcfQ61164 Gm43494-201ENSMUST00000197672 388 ntBASIC4.62□□□□□ -1.67
CtcfQ61164 Gm35702-201ENSMUST00000198653 511 ntBASIC4.62□□□□□ -1.67
CtcfQ61164 Rab5a-ps-201ENSMUST00000203252 653 ntBASIC4.62□□□□□ -1.67
CtcfQ61164 Gm44952-201ENSMUST00000204443 433 ntBASIC4.62□□□□□ -1.67
CtcfQ61164 Gm44212-201ENSMUST00000205016 897 ntBASIC4.62□□□□□ -1.67
CtcfQ61164 Olfr747-202ENSMUST00000205373 1132 ntAPPRIS P1 TSL 5 BASIC4.62□□□□□ -1.67
CtcfQ61164 Gm2059-201ENSMUST00000212025 287 ntBASIC4.62□□□□□ -1.67
CtcfQ61164 AC139754.1-201ENSMUST00000219418 950 ntTSL 1 (best) BASIC4.62□□□□□ -1.67
CtcfQ61164 Gm17820-201ENSMUST00000220213 1068 ntBASIC4.62□□□□□ -1.67
CtcfQ61164 Gm9616-201ENSMUST00000221154 781 ntBASIC4.62□□□□□ -1.67
CtcfQ61164 AC154738.2-201ENSMUST00000227403 1110 ntBASIC4.62□□□□□ -1.67
CtcfQ61164 Olfr453-201ENSMUST00000053647 954 ntAPPRIS P1 BASIC4.62□□□□□ -1.67
CtcfQ61164 Olfr603-201ENSMUST00000071844 939 ntAPPRIS P1 BASIC4.62□□□□□ -1.67
CtcfQ61164 Glipr1l1-201ENSMUST00000073617 896 ntAPPRIS P1 TSL 1 (best) BASIC4.62□□□□□ -1.67
CtcfQ61164 Mir215-201ENSMUST00000083628 112 ntBASIC4.62□□□□□ -1.67
CtcfQ61164 Gm37598-201ENSMUST00000194506 1301 ntBASIC4.62□□□□□ -1.67
CtcfQ61164 AC124426.1-203ENSMUST00000221814 1362 ntBASIC4.62□□□□□ -1.67
CtcfQ61164 AC155921.1-201ENSMUST00000216568 3841 ntBASIC4.62□□□□□ -1.67
CtcfQ61164 Olfr235-202ENSMUST00000207969 2447 ntAPPRIS P1 TSL 3 BASIC4.62□□□□□ -1.67
CtcfQ61164 2310001H17Rik-203ENSMUST00000181517 3981 ntTSL 1 (best) BASIC4.62□□□□□ -1.67
CtcfQ61164 Vmn2r35-201ENSMUST00000169683 2586 ntAPPRIS P1 TSL 5 BASIC4.61□□□□□ -1.67
CtcfQ61164 Stk-ps2-201ENSMUST00000051224 4667 ntTSL 2 BASIC4.61□□□□□ -1.67
CtcfQ61164 Gm43259-201ENSMUST00000198446 3277 ntBASIC4.61□□□□□ -1.67
CtcfQ61164 Neurod4-201ENSMUST00000061571 3345 ntAPPRIS P1 TSL 1 (best) BASIC4.61□□□□□ -1.67
CtcfQ61164 Olfr205-202ENSMUST00000213910 1650 ntAPPRIS P1 TSL 5 BASIC4.61□□□□□ -1.67
CtcfQ61164 Mga-203ENSMUST00000110773 13577 ntAPPRIS ALT2 TSL 5 BASIC4.61□□□□□ -1.67
CtcfQ61164 Znf41-ps-201ENSMUST00000122051 2413 ntBASIC4.61□□□□□ -1.67
CtcfQ61164 Vmn1r195-202ENSMUST00000228711 3056 ntAPPRIS P1 BASIC4.61□□□□□ -1.67
CtcfQ61164 Gm29325-201ENSMUST00000190705 2528 ntBASIC4.61□□□□□ -1.67
CtcfQ61164 Igkv1-131-201ENSMUST00000103306 362 ntAPPRIS P1 BASIC4.61□□□□□ -1.67
CtcfQ61164 Gm24125-201ENSMUST00000104105 137 ntBASIC4.61□□□□□ -1.67
CtcfQ61164 Bpifc-202ENSMUST00000105304 451 ntTSL 5 BASIC4.61□□□□□ -1.67
CtcfQ61164 Gm12598-201ENSMUST00000117333 830 ntBASIC4.61□□□□□ -1.67
CtcfQ61164 Vps29-203ENSMUST00000118765 713 ntTSL 3 BASIC4.61□□□□□ -1.67
CtcfQ61164 Gm11448-201ENSMUST00000120427 450 ntBASIC4.61□□□□□ -1.67
CtcfQ61164 Gm15116-201ENSMUST00000122248 663 ntBASIC4.61□□□□□ -1.67
CtcfQ61164 Gm8200-201ENSMUST00000122390 222 ntBASIC4.61□□□□□ -1.67
CtcfQ61164 Gm13625-201ENSMUST00000149283 480 ntTSL 5 BASIC4.61□□□□□ -1.67
CtcfQ61164 Gm14549-201ENSMUST00000154993 1035 ntTSL 5 BASIC4.61□□□□□ -1.67
CtcfQ61164 Gm26310-201ENSMUST00000157766 117 ntBASIC4.61□□□□□ -1.67
CtcfQ61164 Vmn1r-ps27-201ENSMUST00000174619 985 ntBASIC4.61□□□□□ -1.67
CtcfQ61164 Aste1-207ENSMUST00000176940 1151 ntAPPRIS ALT2 TSL 5 BASIC4.61□□□□□ -1.67
CtcfQ61164 Mir1957b-201ENSMUST00000184608 123 ntBASIC4.61□□□□□ -1.67
CtcfQ61164 Mir7062-201ENSMUST00000185038 66 ntBASIC4.61□□□□□ -1.67
CtcfQ61164 1700003C15Rik-201ENSMUST00000185360 1224 ntTSL 1 (best) BASIC4.61□□□□□ -1.67
CtcfQ61164 2310030A07Rik-201ENSMUST00000186460 610 ntTSL 1 (best) BASIC4.61□□□□□ -1.67
CtcfQ61164 Gm7897-201ENSMUST00000193981 554 ntBASIC4.61□□□□□ -1.67
CtcfQ61164 Gm8023-201ENSMUST00000195298 903 ntBASIC4.61□□□□□ -1.67
CtcfQ61164 Gm42750-201ENSMUST00000199745 353 ntTSL 2 BASIC4.61□□□□□ -1.67
CtcfQ61164 Gm43449-201ENSMUST00000202955 371 ntTSL 3 BASIC4.61□□□□□ -1.67
CtcfQ61164 Gm44727-201ENSMUST00000204225 451 ntBASIC4.61□□□□□ -1.67
CtcfQ61164 Gm44002-201ENSMUST00000205134 594 ntBASIC4.61□□□□□ -1.67
CtcfQ61164 Gm45228-201ENSMUST00000206585 352 ntBASIC4.61□□□□□ -1.67
CtcfQ61164 Gm19366-201ENSMUST00000206996 156 ntBASIC4.61□□□□□ -1.67
CtcfQ61164 Mbd3l1-203ENSMUST00000215255 708 ntAPPRIS P1 TSL 3 BASIC4.61□□□□□ -1.67
CtcfQ61164 Fcf1-201ENSMUST00000021669 749 ntAPPRIS P1 TSL 1 (best) BASIC4.61□□□□□ -1.67
CtcfQ61164 AC123062.1-201ENSMUST00000221287 481 ntBASIC4.61□□□□□ -1.67
CtcfQ61164 Gm30738-201ENSMUST00000221346 502 ntBASIC4.61□□□□□ -1.67
CtcfQ61164 AC160931.2-201ENSMUST00000221445 351 ntBASIC4.61□□□□□ -1.67
CtcfQ61164 AC147256.1-201ENSMUST00000221589 626 ntTSL 3 BASIC4.61□□□□□ -1.67
CtcfQ61164 Gm18338-201ENSMUST00000222381 560 ntBASIC4.61□□□□□ -1.67
CtcfQ61164 AC117202.1-201ENSMUST00000227007 445 ntBASIC4.61□□□□□ -1.67
CtcfQ61164 Vmn1r89-206ENSMUST00000227319 985 ntBASIC4.61□□□□□ -1.67
CtcfQ61164 Olfr1487-201ENSMUST00000076856 948 ntAPPRIS P1 BASIC4.61□□□□□ -1.67
CtcfQ61164 Vmn1r6-201ENSMUST00000079669 1058 ntAPPRIS P2 BASIC4.61□□□□□ -1.67
CtcfQ61164 Gm37668-201ENSMUST00000193745 1944 ntBASIC4.61□□□□□ -1.67
CtcfQ61164 Gm44532-201ENSMUST00000207723 2598 ntTSL 1 (best) BASIC4.61□□□□□ -1.67
CtcfQ61164 Vmn1r89-204ENSMUST00000227239 1992 ntAPPRIS P2 BASIC4.61□□□□□ -1.67
CtcfQ61164 Mageb5-201ENSMUST00000082048 1357 ntAPPRIS P1 TSL 1 (best) BASIC4.61□□□□□ -1.67
CtcfQ61164 Vmn1r-ps73-201ENSMUST00000173130 2120 ntBASIC4.61□□□□□ -1.67
CtcfQ61164 Trpc5os-201ENSMUST00000155206 3585 ntAPPRIS P1 TSL 1 (best) BASIC4.61□□□□□ -1.67
CtcfQ61164 Zfp942-201ENSMUST00000074295 1461 ntAPPRIS P1 TSL 5 BASIC4.61□□□□□ -1.67
CtcfQ61164 Gm15226-201ENSMUST00000156526 2971 ntTSL 1 (best) BASIC4.61□□□□□ -1.67
CtcfQ61164 Vmn2r82-201ENSMUST00000170596 3045 ntAPPRIS P1 TSL 5 BASIC4.61□□□□□ -1.67
CtcfQ61164 Gm36927-201ENSMUST00000192504 1841 ntBASIC4.6□□□□□ -1.67
CtcfQ61164 Olfr1101-202ENSMUST00000214411 3235 ntAPPRIS P1 TSL 3 BASIC4.6□□□□□ -1.67
CtcfQ61164 Gm13630-201ENSMUST00000127849 3650 ntTSL 1 (best) BASIC4.6□□□□□ -1.67
CtcfQ61164 Igkv11-106-201ENSMUST00000103331 346 ntBASIC4.6□□□□□ -1.67
CtcfQ61164 Scimp-202ENSMUST00000108534 1080 ntAPPRIS P1 TSL 1 (best) BASIC4.6□□□□□ -1.67
CtcfQ61164 Tcea1-ps1-201ENSMUST00000117942 904 ntBASIC4.6□□□□□ -1.67
CtcfQ61164 Gm13501-201ENSMUST00000118477 979 ntBASIC4.6□□□□□ -1.67
CtcfQ61164 Gm14586-201ENSMUST00000119571 408 ntBASIC4.6□□□□□ -1.67
CtcfQ61164 Gm14926-201ENSMUST00000120650 508 ntBASIC4.6□□□□□ -1.67
CtcfQ61164 Sult2a-ps2-201ENSMUST00000121135 405 ntBASIC4.6□□□□□ -1.67
CtcfQ61164 Gm13131-201ENSMUST00000122228 321 ntBASIC4.6□□□□□ -1.67
CtcfQ61164 Gm23429-201ENSMUST00000122486 149 ntBASIC4.6□□□□□ -1.67
CtcfQ61164 Gm24198-201ENSMUST00000157812 108 ntBASIC4.6□□□□□ -1.67
CtcfQ61164 Mir1947-201ENSMUST00000158235 85 ntBASIC4.6□□□□□ -1.67
CtcfQ61164 Gm24875-201ENSMUST00000158888 104 ntBASIC4.6□□□□□ -1.67
CtcfQ61164 Gm26933-201ENSMUST00000182320 827 ntBASIC4.6□□□□□ -1.67
CtcfQ61164 Gm18356-201ENSMUST00000185677 623 ntBASIC4.6□□□□□ -1.67
CtcfQ61164 Gm7634-201ENSMUST00000185778 553 ntBASIC4.6□□□□□ -1.67
CtcfQ61164 Gm28596-201ENSMUST00000185870 696 ntBASIC4.6□□□□□ -1.67
CtcfQ61164 Gm28263-201ENSMUST00000185884 400 ntBASIC4.6□□□□□ -1.67
CtcfQ61164 Gm19503-201ENSMUST00000187109 241 ntBASIC4.6□□□□□ -1.67
CtcfQ61164 Gm28190-201ENSMUST00000189766 722 ntBASIC4.6□□□□□ -1.67
CtcfQ61164 Gm32295-201ENSMUST00000192558 696 ntBASIC4.6□□□□□ -1.67
CtcfQ61164 Gm37433-201ENSMUST00000192695 678 ntBASIC4.6□□□□□ -1.67
Retrieved 100 of 76,532 protein–RNA pairs in 74.7 ms