Protein–RNA interactions for Protein: Q5SNZ0

Ccdc88a, Girdin, mousemouse

Predictions only

Length 1,873 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc88aQ5SNZ0 2610044O15Rik8-203ENSMUST00000188757 413 ntTSL 2 BASIC4□□□□□ -1.77
Ccdc88aQ5SNZ0 Gm18384-201ENSMUST00000195974 808 ntBASIC4□□□□□ -1.77
Ccdc88aQ5SNZ0 AC153564.2-201ENSMUST00000219464 273 ntBASIC4□□□□□ -1.77
Ccdc88aQ5SNZ0 AC121966.1-201ENSMUST00000221458 282 ntBASIC4□□□□□ -1.77
Ccdc88aQ5SNZ0 Cd52-201ENSMUST00000000696 514 ntAPPRIS P1 TSL 1 (best) BASIC4□□□□□ -1.77
Ccdc88aQ5SNZ0 Gm23296-201ENSMUST00000082555 107 ntBASIC4□□□□□ -1.77
Ccdc88aQ5SNZ0 Gm24859-201ENSMUST00000082729 107 ntBASIC4□□□□□ -1.77
Ccdc88aQ5SNZ0 Vmn1r185-212ENSMUST00000228633 5385 ntAPPRIS P1 BASIC4□□□□□ -1.77
Ccdc88aQ5SNZ0 Stag2-201ENSMUST00000069619 5825 ntAPPRIS P1 TSL 5 BASIC4□□□□□ -1.77
Ccdc88aQ5SNZ0 Gabra3-202ENSMUST00000114554 1790 ntAPPRIS ALT2 TSL 5 BASIC4□□□□□ -1.77
Ccdc88aQ5SNZ0 Gm38264-201ENSMUST00000194850 2032 ntBASIC3.99□□□□□ -1.77
Ccdc88aQ5SNZ0 Hmcn1-201ENSMUST00000074783 17908 ntAPPRIS P1 TSL 5 BASIC3.99□□□□□ -1.77
Ccdc88aQ5SNZ0 Gm20139-202ENSMUST00000216041 3888 ntTSL 1 (best) BASIC3.99□□□□□ -1.77
Ccdc88aQ5SNZ0 Gm32693-201ENSMUST00000196538 2402 ntTSL 1 (best) BASIC3.99□□□□□ -1.77
Ccdc88aQ5SNZ0 Gm37789-201ENSMUST00000192862 2889 ntBASIC3.99□□□□□ -1.77
Ccdc88aQ5SNZ0 Gm13024-201ENSMUST00000121756 718 ntBASIC3.99□□□□□ -1.77
Ccdc88aQ5SNZ0 Gm16563-201ENSMUST00000162673 423 ntBASIC3.99□□□□□ -1.77
Ccdc88aQ5SNZ0 Pcgf1-204ENSMUST00000176089 492 ntTSL 5 BASIC3.99□□□□□ -1.77
Ccdc88aQ5SNZ0 Gm21959-201ENSMUST00000178439 452 ntBASIC3.99□□□□□ -1.77
Ccdc88aQ5SNZ0 Gm18672-201ENSMUST00000208035 270 ntBASIC3.99□□□□□ -1.77
Ccdc88aQ5SNZ0 Gm44966-201ENSMUST00000208096 157 ntBASIC3.99□□□□□ -1.77
Ccdc88aQ5SNZ0 Gm8106-201ENSMUST00000213123 523 ntBASIC3.99□□□□□ -1.77
Ccdc88aQ5SNZ0 Gm17820-201ENSMUST00000220213 1068 ntBASIC3.99□□□□□ -1.77
Ccdc88aQ5SNZ0 Gm9845-201ENSMUST00000056409 598 ntBASIC3.99□□□□□ -1.77
Ccdc88aQ5SNZ0 Olfr681-201ENSMUST00000098157 948 ntAPPRIS P1 BASIC3.99□□□□□ -1.77
Ccdc88aQ5SNZ0 Olfr393-202ENSMUST00000213365 4048 ntAPPRIS P1 TSL 5 BASIC3.99□□□□□ -1.77
Ccdc88aQ5SNZ0 Gm36529-201ENSMUST00000222495 1529 ntTSL 1 (best) BASIC3.99□□□□□ -1.77
Ccdc88aQ5SNZ0 Olfr729-202ENSMUST00000213163 4283 ntAPPRIS P1 TSL 5 BASIC3.99□□□□□ -1.77
Ccdc88aQ5SNZ0 Gm43923-201ENSMUST00000203992 2911 ntBASIC3.99□□□□□ -1.77
Ccdc88aQ5SNZ0 Gm11673-201ENSMUST00000117846 331 ntBASIC3.98□□□□□ -1.77
Ccdc88aQ5SNZ0 Gm12793-201ENSMUST00000119268 292 ntBASIC3.98□□□□□ -1.77
Ccdc88aQ5SNZ0 Gm18867-201ENSMUST00000198022 1179 ntBASIC3.98□□□□□ -1.77
Ccdc88aQ5SNZ0 Gm44633-201ENSMUST00000205925 439 ntTSL 3 BASIC3.98□□□□□ -1.77
Ccdc88aQ5SNZ0 Gm45259-201ENSMUST00000209217 1006 ntBASIC3.98□□□□□ -1.77
Ccdc88aQ5SNZ0 Gm45368-202ENSMUST00000210944 416 ntTSL 5 BASIC3.98□□□□□ -1.77
Ccdc88aQ5SNZ0 1700024I08Rik-203ENSMUST00000222372 754 ntTSL 1 (best) BASIC3.98□□□□□ -1.77
Ccdc88aQ5SNZ0 Olfr147-201ENSMUST00000056364 1166 ntAPPRIS P2 TSL 2 BASIC3.98□□□□□ -1.77
Ccdc88aQ5SNZ0 Olfr679-201ENSMUST00000098158 952 ntAPPRIS P1 BASIC3.98□□□□□ -1.77
Ccdc88aQ5SNZ0 Gm19619-201ENSMUST00000200707 3201 ntTSL 1 (best) BASIC3.98□□□□□ -1.77
Ccdc88aQ5SNZ0 Gm3616-201ENSMUST00000174430 2514 ntBASIC3.98□□□□□ -1.77
Ccdc88aQ5SNZ0 Gm3683-201ENSMUST00000175701 2513 ntBASIC3.98□□□□□ -1.77
Ccdc88aQ5SNZ0 Olfr992-202ENSMUST00000213749 2150 ntAPPRIS P1 TSL 5 BASIC3.98□□□□□ -1.77
Ccdc88aQ5SNZ0 Gm20619-201ENSMUST00000175814 2008 ntTSL 1 (best) BASIC3.98□□□□□ -1.77
Ccdc88aQ5SNZ0 Vmn1r184-206ENSMUST00000228145 5888 ntAPPRIS P1 BASIC3.98□□□□□ -1.77
Ccdc88aQ5SNZ0 1700008H02Rik-201ENSMUST00000201220 1684 ntBASIC3.98□□□□□ -1.77
Ccdc88aQ5SNZ0 Olfr1226-207ENSMUST00000220416 3387 ntAPPRIS P1 TSL 5 BASIC3.98□□□□□ -1.77
Ccdc88aQ5SNZ0 Trbv13-1-201ENSMUST00000103268 334 ntAPPRIS ALT2 BASIC3.98□□□□□ -1.77
Ccdc88aQ5SNZ0 Trav14d-2-201ENSMUST00000103597 276 ntAPPRIS P1 BASIC3.98□□□□□ -1.77
Ccdc88aQ5SNZ0 Trav14n-2-201ENSMUST00000103623 276 ntAPPRIS P1 BASIC3.98□□□□□ -1.77
Ccdc88aQ5SNZ0 Olfr1296-ps1-201ENSMUST00000117697 939 ntBASIC3.98□□□□□ -1.77
Ccdc88aQ5SNZ0 Gm11893-201ENSMUST00000117829 491 ntBASIC3.98□□□□□ -1.77
Ccdc88aQ5SNZ0 Dnaic1-202ENSMUST00000119127 500 ntTSL 1 (best) BASIC3.98□□□□□ -1.77
Ccdc88aQ5SNZ0 Gm26983-201ENSMUST00000182051 388 ntBASIC3.98□□□□□ -1.77
Ccdc88aQ5SNZ0 Trav14-2-202ENSMUST00000184874 276 ntAPPRIS P1 BASIC3.98□□□□□ -1.77
Ccdc88aQ5SNZ0 4930595O18Rik-201ENSMUST00000205099 607 ntBASIC3.98□□□□□ -1.77
Ccdc88aQ5SNZ0 Gm44964-201ENSMUST00000207011 273 ntBASIC3.98□□□□□ -1.77
Ccdc88aQ5SNZ0 Olfr1309-201ENSMUST00000207885 964 ntBASIC3.98□□□□□ -1.77
Ccdc88aQ5SNZ0 Gm18585-201ENSMUST00000215197 556 ntBASIC3.98□□□□□ -1.77
Ccdc88aQ5SNZ0 AC161254.1-201ENSMUST00000220310 3842 ntBASIC3.98□□□□□ -1.77
Ccdc88aQ5SNZ0 AC129541.1-201ENSMUST00000226940 523 ntBASIC3.98□□□□□ -1.77
Ccdc88aQ5SNZ0 Arhgap12-205ENSMUST00000182066 4506 ntAPPRIS ALT2 TSL 5 BASIC3.98□□□□□ -1.77
Ccdc88aQ5SNZ0 Gm6982-201ENSMUST00000118752 1560 ntBASIC3.97□□□□□ -1.77
Ccdc88aQ5SNZ0 AC091683.1-201ENSMUST00000222307 2446 ntBASIC3.97□□□□□ -1.77
Ccdc88aQ5SNZ0 Gm16420-201ENSMUST00000120258 856 ntBASIC3.97□□□□□ -1.77
Ccdc88aQ5SNZ0 Gm26027-201ENSMUST00000122725 268 ntBASIC3.97□□□□□ -1.77
Ccdc88aQ5SNZ0 Gm17036-201ENSMUST00000168187 254 ntTSL 3 BASIC3.97□□□□□ -1.77
Ccdc88aQ5SNZ0 1700016P04Rik-201ENSMUST00000186770 429 ntTSL 1 (best) BASIC3.97□□□□□ -1.77
Ccdc88aQ5SNZ0 Gm44399-201ENSMUST00000205043 226 ntBASIC3.97□□□□□ -1.77
Ccdc88aQ5SNZ0 Gm7624-201ENSMUST00000209702 435 ntBASIC3.97□□□□□ -1.77
Ccdc88aQ5SNZ0 Gm7948-201ENSMUST00000212607 844 ntBASIC3.97□□□□□ -1.77
Ccdc88aQ5SNZ0 Gm30198-201ENSMUST00000222873 824 ntTSL 2 BASIC3.97□□□□□ -1.77
Ccdc88aQ5SNZ0 4930469K13Rik-202ENSMUST00000223852 537 ntAPPRIS P5 BASIC3.97□□□□□ -1.77
Ccdc88aQ5SNZ0 Vmn1r31-204ENSMUST00000226390 912 ntAPPRIS P2 BASIC3.97□□□□□ -1.77
Ccdc88aQ5SNZ0 Mir99a-201ENSMUST00000083596 65 ntBASIC3.97□□□□□ -1.77
Ccdc88aQ5SNZ0 Gm7876-202ENSMUST00000171305 1758 ntAPPRIS P5 TSL 5 BASIC3.97□□□□□ -1.77
Ccdc88aQ5SNZ0 4932415D10Rik-202ENSMUST00000217661 15111 ntAPPRIS P1 TSL 5 BASIC3.97□□□□□ -1.77
Ccdc88aQ5SNZ0 AC115034.1-201ENSMUST00000215393 3846 ntBASIC3.97□□□□□ -1.77
Ccdc88aQ5SNZ0 AC156632.1-201ENSMUST00000220626 3845 ntBASIC3.97□□□□□ -1.77
Ccdc88aQ5SNZ0 Homer1-205ENSMUST00000109492 1533 ntTSL 1 (best) BASIC3.97□□□□□ -1.77
Ccdc88aQ5SNZ0 Pde1a-205ENSMUST00000102654 4122 ntAPPRIS P1 TSL 5 BASIC3.97□□□□□ -1.77
Ccdc88aQ5SNZ0 Gm6545-201ENSMUST00000217186 1786 ntBASIC3.97□□□□□ -1.77
Ccdc88aQ5SNZ0 Olfr502-202ENSMUST00000216919 3282 ntAPPRIS P1 TSL 5 BASIC3.97□□□□□ -1.77
Ccdc88aQ5SNZ0 AC132336.1-201ENSMUST00000222844 1740 ntBASIC3.97□□□□□ -1.77
Ccdc88aQ5SNZ0 Klhl28-203ENSMUST00000222508 6459 ntAPPRIS P1 TSL 1 (best) BASIC3.96□□□□□ -1.77
Ccdc88aQ5SNZ0 Gm44644-202ENSMUST00000208825 3133 ntTSL 2 BASIC3.96□□□□□ -1.77
Ccdc88aQ5SNZ0 Gm15902-201ENSMUST00000146949 469 ntTSL 3 BASIC3.96□□□□□ -1.77
Ccdc88aQ5SNZ0 Gm23775-201ENSMUST00000158991 249 ntBASIC3.96□□□□□ -1.77
Ccdc88aQ5SNZ0 Ear-ps10-201ENSMUST00000161871 460 ntBASIC3.96□□□□□ -1.77
Ccdc88aQ5SNZ0 Gstm5-202ENSMUST00000167387 599 ntTSL 5 BASIC3.96□□□□□ -1.77
Ccdc88aQ5SNZ0 Mir6905-201ENSMUST00000184228 70 ntBASIC3.96□□□□□ -1.77
Ccdc88aQ5SNZ0 Rpl26-ps6-201ENSMUST00000216693 434 ntBASIC3.96□□□□□ -1.77
Ccdc88aQ5SNZ0 Olfr266-201ENSMUST00000059486 1027 ntAPPRIS P1 BASIC3.96□□□□□ -1.77
Ccdc88aQ5SNZ0 Snora70-201ENSMUST00000083047 137 ntBASIC3.96□□□□□ -1.77
Ccdc88aQ5SNZ0 Gm38706-201ENSMUST00000182397 2617 ntBASIC3.96□□□□□ -1.77
Ccdc88aQ5SNZ0 Ano5-201ENSMUST00000043944 7785 ntTSL 1 (best) BASIC3.96□□□□□ -1.78
Ccdc88aQ5SNZ0 Fbxw28-201ENSMUST00000112039 1497 ntAPPRIS P4 TSL 1 (best) BASIC3.96□□□□□ -1.78
Ccdc88aQ5SNZ0 Gm44682-201ENSMUST00000208501 2614 ntBASIC3.96□□□□□ -1.78
Ccdc88aQ5SNZ0 Olfr136-202ENSMUST00000208525 2534 ntAPPRIS P1 TSL 5 BASIC3.96□□□□□ -1.78
Ccdc88aQ5SNZ0 Gm10488-201ENSMUST00000101657 874 ntAPPRIS P1 TSL 1 (best) BASIC3.96□□□□□ -1.78
Ccdc88aQ5SNZ0 Eif3s6-ps1-201ENSMUST00000117907 470 ntBASIC3.96□□□□□ -1.78
Retrieved 100 of 76,532 protein–RNA pairs in 97.6 ms